RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 DSG2Q14126 1118 aa9.67□□□□□ -0.86
TSPAN6-202ENST00000494424 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
TSPAN6-202ENST00000494424 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
TSPAN6-202ENST00000494424 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 CPDO75976 1380 aa9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 HOXB3P14651 431 aaPredicted RBP9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 LRRC4BQ9NT99 713 aa9.66□□□□□ -0.86
TSPAN6-202ENST00000494424 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
TSPAN6-202ENST00000494424 LBX1P52954 281 aa9.65□□□□□ -0.86
TSPAN6-202ENST00000494424 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
TSPAN6-202ENST00000494424 COL5A2P05997 1499 aaPredicted RBP9.64□□□□□ -0.87
TSPAN6-202ENST00000494424 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
TSPAN6-202ENST00000494424 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 KNDC1Q76NI1 1749 aa9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 ST18O60284 1047 aa9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 TBC1D12O60347 775 aa9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 NUP155O75694 1391 aa9.63□□□□□ -0.87
TSPAN6-202ENST00000494424 NHSQ6T4R5 1651 aa9.62□□□□□ -0.87
TSPAN6-202ENST00000494424 RRAGCQ9HB90 399 aa9.62□□□□□ -0.87
TSPAN6-202ENST00000494424 EXOC5O00471 708 aa9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 TSHZ2Q9NRE2 1034 aa9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 WBP1LQ9NX94 342 aa9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 EIF3AQ14152 1382 aaKnown RBP9.61□□□□□ -0.87
TSPAN6-202ENST00000494424 USP6P35125 1406 aa9.6□□□□□ -0.87
TSPAN6-202ENST00000494424 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
TSPAN6-202ENST00000494424 GCC1Q96CN9 775 aa9.6□□□□□ -0.87
TSPAN6-202ENST00000494424 MKRN1Q9UHC7 482 aaKnown RBP9.6□□□□□ -0.87
TSPAN6-202ENST00000494424 KIF1BO60333 1816 aa9.6□□□□□ -0.87
TSPAN6-202ENST00000494424 HSPA8P11142 646 aaKnown RBP9.59□□□□□ -0.87
TSPAN6-202ENST00000494424 TOM1L2Q6ZVM7 507 aa9.59□□□□□ -0.87
TSPAN6-202ENST00000494424 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
TSPAN6-202ENST00000494424 TRPM1Q7Z4N2 1603 aa9.59□□□□□ -0.87
TSPAN6-202ENST00000494424 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
TSPAN6-202ENST00000494424 YTHDC2Q9H6S0 1430 aaKnown RBP9.58□□□□□ -0.88
TSPAN6-202ENST00000494424 KCPQ6ZWJ8 1503 aa9.58□□□□□ -0.88
TSPAN6-202ENST00000494424 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
TSPAN6-202ENST00000494424 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 C9orf131Q5VYM1 1079 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 GPR153Q6NV75 609 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 ARHGAP27Q6ZUM4 889 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 ACSBG1Q96GR2 724 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
TSPAN6-202ENST00000494424 DLL1O00548 723 aa9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 HMGB2P26583 209 aaKnown RBP9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 FLAD1Q8NFF5 587 aa9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 OXER1Q8TDS5 423 aa9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
TSPAN6-202ENST00000494424 VEGFAP15692 232 aaPredicted RBP9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 EMP3P54852 163 aa9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 NUTM2GQ5VZR2 741 aa9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 VPS8Q8N3P4 1428 aa9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 WDR17Q8IZU2 1322 aa9.55□□□□□ -0.88
TSPAN6-202ENST00000494424 BTAF1O14981 1849 aa9.54□□□□□ -0.88
TSPAN6-202ENST00000494424 WNK3Q9BYP7 1800 aa9.54□□□□□ -0.88
TSPAN6-202ENST00000494424 GCP02774 474 aa9.54□□□□□ -0.88
TSPAN6-202ENST00000494424 E2F4Q16254 413 aa9.54□□□□□ -0.88
TSPAN6-202ENST00000494424 PPLO60437 1756 aa9.54□□□□□ -0.88
TSPAN6-202ENST00000494424 MAP2K1Q02750 393 aaPredicted RBP9.53□□□□□ -0.88
TSPAN6-202ENST00000494424 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
TSPAN6-202ENST00000494424 CARD10Q9BWT7 1032 aa9.53□□□□□ -0.88
TSPAN6-202ENST00000494424 BCS1LQ9Y276 419 aa9.53□□□□□ -0.88
TSPAN6-202ENST00000494424 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
TSPAN6-202ENST00000494424 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
TSPAN6-202ENST00000494424 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
TSPAN6-202ENST00000494424 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
TSPAN6-202ENST00000494424 PRR36Q9H6K5 1346 aa9.52□□□□□ -0.89
TSPAN6-202ENST00000494424 VEGFBP49765 207 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 TGFB2P61812 414 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 NLRP13Q86W25 1043 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 VSIG10Q8N0Z9 540 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 PKD1L3Q7Z443 1732 aa9.51□□□□□ -0.89
TSPAN6-202ENST00000494424 POTEMA6NI47 508 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 RNF181Q9P0P0 153 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 POGKQ9P215 609 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 ABCC6O95255 1503 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
TSPAN6-202ENST00000494424 MCOLN1Q9GZU1 580 aa9.49□□□□□ -0.89
TSPAN6-202ENST00000494424 COL18A1P39060 1754 aa9.49□□□□□ -0.89
TSPAN6-202ENST00000494424 ERBB3P21860 1342 aa9.49□□□□□ -0.89
TSPAN6-202ENST00000494424 PITPNM2Q9BZ72 1349 aa9.49□□□□□ -0.89
TSPAN6-202ENST00000494424 ROCK1Q13464 1354 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms