RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	KDM3B	Q7LBC6	1761 aa		28.33	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	BTBD11	A6QL63	1104 aa		28.33	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	C1orf115	Q9H7X2	142 aa		28.33	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	CCT4	P50991	539 aa	Known RBP	28.32	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	ADAMTS7	Q9UKP4	1686 aa		28.32	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	FLII	Q13045	1269 aa		28.32	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	SPG7	Q9UQ90	795 aa		28.32	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	NUCB1	Q02818	461 aa		28.31	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	HDGFL1	Q5TGJ6	251 aa		28.31	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	IPO9	Q96P70	1041 aa	Known RBP	28.31	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	SIRT2	Q8IXJ6	389 aa		28.29	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	MEGF6	O75095	1541 aa		28.29	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	NPM2	Q86SE8	214 aa	Known RBP	28.27	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	PRDM11	Q9NQV5	511 aa		28.27	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	NHSL1	Q5SYE7	1610 aa		28.26	■■■□□ 2.12
ARHGAP4-223	ENST00000494397	FKBP5	Q13451	457 aa	Predicted RBP	28.26	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.26	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	PHKG2	P15735	406 aa		28.25	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	CHD1L	Q86WJ1	897 aa		28.25	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	NECTIN2	Q92692	538 aa		28.25	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	ATP10D	Q9P241	1426 aa		28.25	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	PXDNL	A1KZ92	1463 aa		28.25	■■■□□ 2.11
ARHGAP4-223	ENST00000494397		F6X3S4	739 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	KCNQ3	O43525	872 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	ANKRD44	Q8N8A2	993 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	SLC4A10	Q6U841	1118 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	IFNL2	Q8IZJ0	200 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	WDR17	Q8IZU2	1322 aa		28.24	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	HEG1	Q9ULI3	1381 aa		28.23	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	MEIS3	Q99687	375 aa		28.23	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	KDM6A	O15550	1401 aa	Predicted RBP	28.21	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	CEP85	Q6P2H3	762 aa		28.2	■■■□□ 2.11
ARHGAP4-223	ENST00000494397	SIPA1L3	O60292	1781 aa	Predicted RBP	28.2	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	COL5A2	P05997	1499 aa	Predicted RBP	28.2	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	DCTPP1	Q9H773	170 aa		28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	SLC52A2	Q9HAB3	445 aa		28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	ABCA3	Q99758	1704 aa		28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	PKD1L3	Q7Z443	1732 aa		28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	HSP90AB1	P08238	724 aa	Known RBP	28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	EIF2S2	P20042	333 aa	Known RBP	28.19	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	CACNA1F	O60840	1977 aa		28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	GIGYF1	O75420	1035 aa	Predicted RBP	28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	ANKRD45	Q5TZF3	282 aa		28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	DCAF5	Q96JK2	942 aa		28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	LNPK	Q9C0E8	428 aa		28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	VIRMA	Q69YN4	1812 aa	Known RBP	28.18	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	CHPF2	Q9P2E5	772 aa		28.16	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	NOP58	Q9Y2X3	529 aa	Known RBP	28.16	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	MRC1	P22897	1456 aa		28.16	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	GNAI3	P08754	354 aa		28.16	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	PHAX	Q9H814	394 aa	Known RBP	28.16	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	CYP27B1	O15528	508 aa		28.15	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	TOM1L2	Q6ZVM7	507 aa		28.15	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	DDRGK1	Q96HY6	314 aa		28.15	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	DBF4	Q9UBU7	674 aa	Predicted RBP	28.15	■■■□□ 2.1
ARHGAP4-223	ENST00000494397	GNAI2	P04899	355 aa		28.14	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	ERICH6	Q7L0X2	663 aa		28.14	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	SCN11A	Q9UI33	1791 aa		28.14	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.13	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	HMMR	O75330	724 aa		28.13	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.13	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	ZNF790	Q6PG37	636 aa		28.12	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	CARD10	Q9BWT7	1032 aa		28.12	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	PARP4	Q9UKK3	1724 aa	Known RBP	28.1	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	NFATC2IP	Q8NCF5	419 aa		28.1	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	PCDH11X	Q9BZA7	1347 aa		28.09	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	PCDH11Y	Q9BZA8	1340 aa		28.09	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	ZCRB1	Q8TBF4	217 aa	Known RBP	28.08	■■■□□ 2.09
ARHGAP4-223	ENST00000494397	SEC24B	O95487	1268 aa		28.07	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	BMP2KL	Q5H9B9	411 aa		28.07	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	SRCIN1	Q9C0H9	1055 aa		28.07	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.07	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	DNAAF4	Q8WXU2	420 aa		28.06	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	HYPK	Q9NX55	129 aa		28.06	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	IL2RB	P14784	551 aa		28.06	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	UPF2	Q9HAU5	1272 aa	Known RBP	28.06	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	LTBP4	Q8N2S1	1624 aa		28.05	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	EVA1C	P58658	441 aa		28.05	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	USP44	Q9H0E7	712 aa		28.05	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	PI4KAP2	A4QPH2	592 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	SLC39A6	Q13433	755 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	PI4KAP1	Q8N8J0	262 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	ADCY9	O60503	1353 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	PRAMEF22	A3QJZ6	481 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	CABP4	P57796	275 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	BEND3	Q5T5X7	828 aa		28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	LARP1	Q6PKG0	1096 aa	Known RBP	28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	ROBO1	Q9Y6N7	1651 aa		28.03	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	TTC5	Q8N0Z6	440 aa		28.03	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	ANP32E	Q9BTT0	268 aa		28.03	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	ANXA1	P04083	346 aa		28.02	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	UBTFL1	P0CB47	393 aa	Predicted RBP	28.02	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	STRN4	Q9NRL3	753 aa		28.02	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	ATP8B2	P98198	1209 aa		28.01	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	NKX1-1	Q15270	411 aa	Predicted RBP	28.01	■■■□□ 2.08
ARHGAP4-223	ENST00000494397	PROSER3	Q2NL68	480 aa		28.01	■■■□□ 2.07
ARHGAP4-223	ENST00000494397	KSR2	Q6VAB6	950 aa		28	■■■□□ 2.07
ARHGAP4-223	ENST00000494397	ZNF496	Q96IT1	587 aa	Predicted RBP	28	■■■□□ 2.07
ARHGAP4-223	ENST00000494397	SNRPA1	P09661	255 aa	Known RBP	27.99	■■■□□ 2.07

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