RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
CTDSP1-212ENST00000494067 ATG3Q9NT62 314 aa18.25■□□□□ 0.51
CTDSP1-212ENST00000494067 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
CTDSP1-212ENST00000494067 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-212ENST00000494067 SIK1P57059 783 aa18.24■□□□□ 0.51
CTDSP1-212ENST00000494067 AK7Q96M32 723 aa18.24■□□□□ 0.51
CTDSP1-212ENST00000494067 PLEKHO1Q53GL0 409 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-212ENST00000494067 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-212ENST00000494067 AMOTQ4VCS5 1084 aa18.22■□□□□ 0.51
CTDSP1-212ENST00000494067 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
CTDSP1-212ENST00000494067 TJP1Q07157 1748 aa18.22■□□□□ 0.51
CTDSP1-212ENST00000494067 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
CTDSP1-212ENST00000494067 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-212ENST00000494067 GPR162Q16538 588 aa18.21■□□□□ 0.51
CTDSP1-212ENST00000494067 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-212ENST00000494067 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
CTDSP1-212ENST00000494067 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 PHF14O94880 888 aa18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 HMOX1P09601 288 aa18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 CICQ96RK0 1608 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-212ENST00000494067 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
CTDSP1-212ENST00000494067 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
CTDSP1-212ENST00000494067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-212ENST00000494067 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-212ENST00000494067 MRC1P22897 1456 aa18.17■□□□□ 0.5
CTDSP1-212ENST00000494067 CHD4Q14839 1912 aa18.16■□□□□ 0.5
CTDSP1-212ENST00000494067 GNPATO15228 680 aa18.15■□□□□ 0.5
CTDSP1-212ENST00000494067 CABP4P57796 275 aa18.15■□□□□ 0.5
CTDSP1-212ENST00000494067 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
CTDSP1-212ENST00000494067 SSFA2P28290 1259 aa18.14■□□□□ 0.49
CTDSP1-212ENST00000494067 NFATC2IPQ8NCF5 419 aa18.14■□□□□ 0.49
CTDSP1-212ENST00000494067 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
CTDSP1-212ENST00000494067 KIAA1551Q9HCM1 1747 aa18.14■□□□□ 0.49
CTDSP1-212ENST00000494067 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-212ENST00000494067 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-212ENST00000494067 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
CTDSP1-212ENST00000494067 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-212ENST00000494067 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
CTDSP1-212ENST00000494067 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-212ENST00000494067 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■□□□□ 10.2
CTDSP1-212ENST00000494067 AKAP4Q5JQC9 854 aa18.11■□□□□ 0.49
CTDSP1-212ENST00000494067 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
CTDSP1-212ENST00000494067 GRIN3BO60391 1043 aa18.1■□□□□ 0.49
CTDSP1-212ENST00000494067 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
CTDSP1-212ENST00000494067 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
CTDSP1-212ENST00000494067 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
CTDSP1-212ENST00000494067 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
CTDSP1-212ENST00000494067 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.48
CTDSP1-212ENST00000494067 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.48
CTDSP1-212ENST00000494067 SLC39A6Q13433 755 aa18.07■□□□□ 0.48
CTDSP1-212ENST00000494067 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-212ENST00000494067 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
CTDSP1-212ENST00000494067 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
CTDSP1-212ENST00000494067 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
CTDSP1-212ENST00000494067 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
CTDSP1-212ENST00000494067 ADRA2BP18089 450 aa18.05■□□□□ 0.48
CTDSP1-212ENST00000494067 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
CTDSP1-212ENST00000494067 RPS6KA4O75676 772 aa18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 PPP2R1AP30153 589 aa18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
CTDSP1-212ENST00000494067 MMP10P09238 476 aa18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 GYS1P13807 737 aa18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 RFC4P35249 363 aa18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
CTDSP1-212ENST00000494067 IL17REQ8NFR9 667 aa18.02■□□□□ 0.48
CTDSP1-212ENST00000494067 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
CTDSP1-212ENST00000494067 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-212ENST00000494067 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CTDSP1-212ENST00000494067 CFAP53Q96M91 514 aa18■□□□□ 0.47
CTDSP1-212ENST00000494067 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-212ENST00000494067 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
CTDSP1-212ENST00000494067 CEMIPQ8WUJ3 1361 aa17.98■□□□□ 0.47
CTDSP1-212ENST00000494067 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
CTDSP1-212ENST00000494067 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
CTDSP1-212ENST00000494067 FKBP8Q14318 412 aa17.97■□□□□ 0.47
CTDSP1-212ENST00000494067 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
CTDSP1-212ENST00000494067 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
CTDSP1-212ENST00000494067 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
CTDSP1-212ENST00000494067 AFDNP55196 1824 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-212ENST00000494067 DLG5Q8TDM6 1919 aa17.96■□□□□ 0.47
CTDSP1-212ENST00000494067 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
CTDSP1-212ENST00000494067 DDR1Q08345 913 aa17.96■□□□□ 0.47
CTDSP1-212ENST00000494067 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
CTDSP1-212ENST00000494067 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
CTDSP1-212ENST00000494067 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
CTDSP1-212ENST00000494067 KCNQ3O43525 872 aa17.95■□□□□ 0.46
CTDSP1-212ENST00000494067 TGFB2P61812 414 aa17.95■□□□□ 0.46
CTDSP1-212ENST00000494067 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
CTDSP1-212ENST00000494067 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
CTDSP1-212ENST00000494067 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 COL15A1P39059 1388 aa17.93■□□□□ 0.46
CTDSP1-212ENST00000494067 ZPR1O75312 459 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms