RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
CLCN6-208ENST00000494028 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
CLCN6-208ENST00000494028 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-208ENST00000494028 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-208ENST00000494028 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
CLCN6-208ENST00000494028 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
CLCN6-208ENST00000494028 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-208ENST00000494028 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
CLCN6-208ENST00000494028 CHMP4BQ9H444 224 aaKnown RBP13.48□□□□□ -0.25
CLCN6-208ENST00000494028 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
CLCN6-208ENST00000494028 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
CLCN6-208ENST00000494028 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-208ENST00000494028 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
CLCN6-208ENST00000494028 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
CLCN6-208ENST00000494028 G2E3Q7L622 706 aa13.46□□□□□ -0.25
CLCN6-208ENST00000494028 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
CLCN6-208ENST00000494028 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
CLCN6-208ENST00000494028 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
CLCN6-208ENST00000494028 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
CLCN6-208ENST00000494028 HEG1Q9ULI3 1381 aa13.44□□□□□ -0.26
CLCN6-208ENST00000494028 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 HOXB7P09629 217 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
CLCN6-208ENST00000494028 CHRNA2Q15822 529 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
CLCN6-208ENST00000494028 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
CLCN6-208ENST00000494028 NRAPQ86VF7 1730 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 NUCB1Q02818 461 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 TEFQ10587 303 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 FLIIQ13045 1269 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
CLCN6-208ENST00000494028 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
CLCN6-208ENST00000494028 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
CLCN6-208ENST00000494028 MEIS3Q99687 375 aa13.41□□□□□ -0.26
CLCN6-208ENST00000494028 NLRP2Q9NX02 1062 aa13.41□□□□□ -0.26
CLCN6-208ENST00000494028 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
CLCN6-208ENST00000494028 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 PHLPP1O60346 1717 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 F6X3S4 739 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 KCNQ3O43525 872 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-208ENST00000494028 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
CLCN6-208ENST00000494028 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
CLCN6-208ENST00000494028 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 PHKG2P15735 406 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 CEP85Q6P2H3 762 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLCN6-208ENST00000494028 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
CLCN6-208ENST00000494028 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 UBAP1LF5GYI3 381 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 CHD1LQ86WJ1 897 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 LNPKQ9C0E8 428 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 AFDNP55196 1824 aaKnown RBP13.38□□□□□ -0.27
CLCN6-208ENST00000494028 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
CLCN6-208ENST00000494028 ADCY9O60503 1353 aa13.37□□□□□ -0.27
CLCN6-208ENST00000494028 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.37□□□□□ -0.27
CLCN6-208ENST00000494028 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-208ENST00000494028 LRP6O75581 1613 aa13.36□□□□□ -0.27
CLCN6-208ENST00000494028 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
CLCN6-208ENST00000494028 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
CLCN6-208ENST00000494028 ITGB4P16144 1822 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 TOM1O60784 492 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 SLC4A10Q6U841 1118 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
CLCN6-208ENST00000494028 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 TJP1Q07157 1748 aa13.35□□□□□ -0.27
CLCN6-208ENST00000494028 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 DISP2A7MBM2 1401 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 CYP27B1O15528 508 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 SEC24BO95487 1268 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
CLCN6-208ENST00000494028 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
CLCN6-208ENST00000494028 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-208ENST00000494028 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
CLCN6-208ENST00000494028 IFNL2Q8IZJ0 200 aa13.33□□□□□ -0.28
CLCN6-208ENST00000494028 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
CLCN6-208ENST00000494028 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
CLCN6-208ENST00000494028 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.28
CLCN6-208ENST00000494028 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
CLCN6-208ENST00000494028 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
CLCN6-208ENST00000494028 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
CLCN6-208ENST00000494028 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 ANXA1P04083 346 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 GNAI2P04899 355 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 GNAI3P08754 354 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
CLCN6-208ENST00000494028 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms