RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PER1O15534 1290 aaPredicted RBP32.17■■■□□ 2.74
RHBDD3-206ENST00000493894 PHF14O94880 888 aa32.17■■■□□ 2.74
RHBDD3-206ENST00000493894 SSFA2P28290 1259 aa32.17■■■□□ 2.74
RHBDD3-206ENST00000493894 ITPK1Q13572 414 aa32.16■■■□□ 2.74
RHBDD3-206ENST00000493894 GPR162Q16538 588 aa32.16■■■□□ 2.74
RHBDD3-206ENST00000493894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.15■■■□□ 2.74
RHBDD3-206ENST00000493894 MTHFSP49914 203 aa32.15■■■□□ 2.74
RHBDD3-206ENST00000493894 AMIGO3Q86WK7 504 aa32.15■■■□□ 2.74
RHBDD3-206ENST00000493894 CC2D1BQ5T0F9 858 aaKnown RBP32.14■■■□□ 2.74
RHBDD3-206ENST00000493894 NLGN2Q8NFZ4 835 aa32.14■■■□□ 2.74
RHBDD3-206ENST00000493894 ZNF831Q5JPB2 1677 aa32.14■■■□□ 2.74
RHBDD3-206ENST00000493894 CABP4P57796 275 aa32.13■■■□□ 2.73
RHBDD3-206ENST00000493894 CHD4Q14839 1912 aa32.12■■■□□ 2.73
RHBDD3-206ENST00000493894 UTRNP46939 3433 aa32.12■■■□□ 2.73
RHBDD3-206ENST00000493894 GNPATO15228 680 aa32.12■■■□□ 2.73
RHBDD3-206ENST00000493894 PELP1Q8IZL8 1130 aaKnown RBP32.11■■■□□ 2.73
RHBDD3-206ENST00000493894 NPC1L1Q9UHC9 1359 aa32.1■■■□□ 2.73
RHBDD3-206ENST00000493894 RBM42Q9BTD8 480 aaKnown RBP32.1■■■□□ 2.73
RHBDD3-206ENST00000493894 SMIM5Q71RC9 77 aa32.09■■■□□ 2.73
RHBDD3-206ENST00000493894 COL5A3P25940 1745 aaPredicted RBP32.07■■■□□ 2.72
RHBDD3-206ENST00000493894 SCN11AQ9UI33 1791 aa32.06■■■□□ 2.72
RHBDD3-206ENST00000493894 DIAPH1O60610 1272 aaKnown RBP32.05■■■□□ 2.72
RHBDD3-206ENST00000493894 SLC4A9Q96Q91 983 aa32.05■■■□□ 2.72
RHBDD3-206ENST00000493894 CD2APQ9Y5K6 639 aa32.05■■■□□ 2.72
RHBDD3-206ENST00000493894 HMOX1P09601 288 aa32.04■■■□□ 2.72
RHBDD3-206ENST00000493894 AKAP4Q5JQC9 854 aa32.03■■■□□ 2.72
RHBDD3-206ENST00000493894 NFATC2IPQ8NCF5 419 aa32.02■■■□□ 2.72
RHBDD3-206ENST00000493894 RTCBQ9Y3I0 505 aaKnown RBP32.02■■■□□ 2.72
RHBDD3-206ENST00000493894 CNTNAP4Q9C0A0 1308 aa32.01■■■□□ 2.72
RHBDD3-206ENST00000493894 CNGB1Q14028 1251 aaPredicted RBP32.01■■■□□ 2.71
RHBDD3-206ENST00000493894 COL3A1P02461 1466 aaPredicted RBP32■■■□□ 2.71
RHBDD3-206ENST00000493894 ZNF784Q8NCA9 323 aaPredicted RBP32■■■□□ 2.71
RHBDD3-206ENST00000493894 PTCD1O75127 700 aaKnown RBP31.99■■■□□ 2.71
RHBDD3-206ENST00000493894 RC3H1Q5TC82 1133 aaKnown RBP31.99■■■□□ 2.71
RHBDD3-206ENST00000493894 MRC1P22897 1456 aa31.98■■■□□ 2.71
RHBDD3-206ENST00000493894 CICQ96RK0 1608 aaPredicted RBP31.98■■■□□ 2.71
RHBDD3-206ENST00000493894 GOLGB1Q14789 3259 aaKnown RBP31.97■■■□□ 2.71
RHBDD3-206ENST00000493894 ADRA2BP18089 450 aa31.97■■■□□ 2.71
RHBDD3-206ENST00000493894 TRAPPC3LQ5T215 181 aa31.97■■■□□ 2.71
RHBDD3-206ENST00000493894 GRIN3BO60391 1043 aa31.96■■■□□ 2.71
RHBDD3-206ENST00000493894 YBX3P16989 372 aaKnown RBP eCLIP31.96■■■□□ 2.71
RHBDD3-206ENST00000493894 SLC52A2Q9HAB3 445 aa31.95■■■□□ 2.71
RHBDD3-206ENST00000493894 TJP1Q07157 1748 aa31.95■■■□□ 2.7
RHBDD3-206ENST00000493894 VIRMAQ69YN4 1812 aaKnown RBP31.93■■■□□ 2.7
RHBDD3-206ENST00000493894 RPS6KA4O75676 772 aa31.93■■■□□ 2.7
RHBDD3-206ENST00000493894 ADAMTS7Q9UKP4 1686 aa31.92■■■□□ 2.7
RHBDD3-206ENST00000493894 MTHFSDQ2M296 383 aaKnown RBP31.92■■■□□ 2.7
RHBDD3-206ENST00000493894 C4AP0C0L4 1744 aa31.92■■■□□ 2.7
RHBDD3-206ENST00000493894 MYH14Q7Z406 1995 aaKnown RBP31.91■■■□□ 2.7
RHBDD3-206ENST00000493894 RNMTO43148 476 aaKnown RBP31.91■■■□□ 2.7
RHBDD3-206ENST00000493894 MMP10P09238 476 aa31.91■■■□□ 2.7
RHBDD3-206ENST00000493894 ARHGEF1Q92888 912 aaKnown RBP31.91■■■□□ 2.7
RHBDD3-206ENST00000493894 LGR6Q9HBX8 967 aa31.91■■■□□ 2.7
RHBDD3-206ENST00000493894 U2SURPO15042 1029 aaKnown RBP31.9■■■□□ 2.7
RHBDD3-206ENST00000493894 RFC4P35249 363 aa31.9■■■□□ 2.7
RHBDD3-206ENST00000493894 NLGN1Q8N2Q7 840 aa31.9■■■□□ 2.7
RHBDD3-206ENST00000493894 CRKLP46109 303 aaKnown RBP31.89■■■□□ 2.7
RHBDD3-206ENST00000493894 CFAP53Q96M91 514 aa31.86■■■□□ 2.69
RHBDD3-206ENST00000493894 GYS1P13807 737 aa31.85■■■□□ 2.69
RHBDD3-206ENST00000493894 KCPQ6ZWJ8 1503 aa31.84■■■□□ 2.69
RHBDD3-206ENST00000493894 KIF13BQ9NQT8 1826 aa31.83■■■□□ 2.69
RHBDD3-206ENST00000493894 SLC39A6Q13433 755 aa31.82■■■□□ 2.68
RHBDD3-206ENST00000493894 GAS2L2Q8NHY3 880 aa31.82■■■□□ 2.68
RHBDD3-206ENST00000493894 DNAJC10Q8IXB1 793 aa31.81■■■□□ 2.68
RHBDD3-206ENST00000493894 C10orf71Q711Q0 1435 aa31.81■■■□□ 2.68
RHBDD3-206ENST00000493894 USP42Q9H9J4 1324 aaKnown RBP31.79■■■□□ 2.68
RHBDD3-206ENST00000493894 PXDNLA1KZ92 1463 aa31.79■■■□□ 2.68
RHBDD3-206ENST00000493894 CCDC87Q9NVE4 849 aa31.79■■■□□ 2.68
RHBDD3-206ENST00000493894 WWC3Q9ULE0 1092 aa31.79■■■□□ 2.68
RHBDD3-206ENST00000493894 UBR2Q8IWV8 1755 aa31.79■■■□□ 2.68
RHBDD3-206ENST00000493894 INTS5Q6P9B9 1019 aaKnown RBP31.78■■■□□ 2.68
RHBDD3-206ENST00000493894 PARP3Q9Y6F1 533 aa31.78■■■□□ 2.68
RHBDD3-206ENST00000493894 KIAA1551Q9HCM1 1747 aa31.77■■■□□ 2.68
RHBDD3-206ENST00000493894 GNAT3A8MTJ3 354 aa31.76■■■□□ 2.67
RHBDD3-206ENST00000493894 SRP68Q9UHB9 627 aaKnown RBP31.76■■■□□ 2.67
RHBDD3-206ENST00000493894 NUDCQ9Y266 331 aa31.76■■■□□ 2.67
RHBDD3-206ENST00000493894 PPP2R1AP30153 589 aa31.75■■■□□ 2.67
RHBDD3-206ENST00000493894 TEFQ10587 303 aa31.75■■■□□ 2.67
RHBDD3-206ENST00000493894 CYP19A1P11511 503 aaPredicted RBP31.74■■■□□ 2.67
RHBDD3-206ENST00000493894 TGFB2P61812 414 aa31.74■■■□□ 2.67
RHBDD3-206ENST00000493894 TTC5Q8N0Z6 440 aa31.74■■■□□ 2.67
RHBDD3-206ENST00000493894 VSIG10Q8N0Z9 540 aa31.74■■■□□ 2.67
RHBDD3-206ENST00000493894 SOS1Q07889 1333 aaPredicted RBP31.74■■■□□ 2.67
RHBDD3-206ENST00000493894 PRKAR2BP31323 418 aa31.73■■■□□ 2.67
RHBDD3-206ENST00000493894 N4BP2Q86UW6 1770 aaPredicted RBP31.72■■■□□ 2.67
RHBDD3-206ENST00000493894 RSPH6AQ9H0K4 717 aa31.72■■■□□ 2.67
RHBDD3-206ENST00000493894 SIPA1L3O60292 1781 aaPredicted RBP31.71■■■□□ 2.67
RHBDD3-206ENST00000493894 FKBP8Q14318 412 aa31.71■■■□□ 2.67
RHBDD3-206ENST00000493894 COL15A1P39059 1388 aa31.7■■■□□ 2.67
RHBDD3-206ENST00000493894 ZPR1O75312 459 aa31.7■■■□□ 2.67
RHBDD3-206ENST00000493894 IL17REQ8NFR9 667 aa31.7■■■□□ 2.67
RHBDD3-206ENST00000493894 ZBTB1Q9Y2K1 713 aa31.69■■■□□ 2.66
RHBDD3-206ENST00000493894 ATP10DQ9P241 1426 aa31.68■■■□□ 2.66
RHBDD3-206ENST00000493894 GIGYF1O75420 1035 aaPredicted RBP31.68■■■□□ 2.66
RHBDD3-206ENST00000493894 U2AF1L5P0DN76 240 aaPredicted RBP31.68■■■□□ 2.66
RHBDD3-206ENST00000493894 U2AF1Q01081 240 aaKnown RBP eCLIP31.68■■■□□ 2.66
RHBDD3-206ENST00000493894 A0A0G2JLW4 131 aa31.67■■■□□ 2.66
RHBDD3-206ENST00000493894 PHACTR3Q96KR7 559 aa31.67■■■□□ 2.66
RHBDD3-206ENST00000493894 ADCY9O60503 1353 aa31.67■■■□□ 2.66
RHBDD3-206ENST00000493894 CEMIPQ8WUJ3 1361 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 285.1 ms