RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SSFA2P28290 1259 aa14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 SMIM5Q71RC9 77 aa14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 LINC00116Q8NCU8 138 aa14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 CD2APQ9Y5K6 639 aa14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 MYH14Q7Z406 1995 aaKnown RBP14.1□□□□□ -0.15
NUDCD3-210ENST00000493613 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
NUDCD3-210ENST00000493613 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
NUDCD3-210ENST00000493613 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.15
NUDCD3-210ENST00000493613 TJP1Q07157 1748 aa14.08□□□□□ -0.16
NUDCD3-210ENST00000493613 ITPK1Q13572 414 aa14.08□□□□□ -0.16
NUDCD3-210ENST00000493613 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
NUDCD3-210ENST00000493613 KDRP35968 1356 aa14.08□□□□□ -0.16
NUDCD3-210ENST00000493613 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
NUDCD3-210ENST00000493613 GNPATO15228 680 aa14.07□□□□□ -0.16
NUDCD3-210ENST00000493613 C1QTNF8P60827 252 aa14.07□□□□□ -0.16
NUDCD3-210ENST00000493613 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
NUDCD3-210ENST00000493613 ERVV-2B6SEH9 535 aa14.06□□□□□ -0.16
NUDCD3-210ENST00000493613 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
NUDCD3-210ENST00000493613 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
NUDCD3-210ENST00000493613 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
NUDCD3-210ENST00000493613 DCAF5Q96JK2 942 aa14.06□□□□□ -0.16
NUDCD3-210ENST00000493613 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-210ENST00000493613 ZNF530Q6P9A1 599 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-210ENST00000493613 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
NUDCD3-210ENST00000493613 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
NUDCD3-210ENST00000493613 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-210ENST00000493613 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
NUDCD3-210ENST00000493613 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
NUDCD3-210ENST00000493613 RTCBQ9Y3I0 505 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-210ENST00000493613 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
NUDCD3-210ENST00000493613 CEP350Q5VT06 3117 aa14.03□□□□□ -0.16
NUDCD3-210ENST00000493613 ATP10DQ9P241 1426 aa14.02□□□□□ -0.16
NUDCD3-210ENST00000493613 CABP4P57796 275 aa14.02□□□□□ -0.17
NUDCD3-210ENST00000493613 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
NUDCD3-210ENST00000493613 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.17
NUDCD3-210ENST00000493613 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
NUDCD3-210ENST00000493613 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
NUDCD3-210ENST00000493613 MMP10P09238 476 aa14.01□□□□□ -0.17
NUDCD3-210ENST00000493613 MTHFSP49914 203 aa14.01□□□□□ -0.17
NUDCD3-210ENST00000493613 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
NUDCD3-210ENST00000493613 SULT6B1Q6IMI4 303 aa14.01□□□□□ -0.17
NUDCD3-210ENST00000493613 CNTNAP4Q9C0A0 1308 aa14□□□□□ -0.17
NUDCD3-210ENST00000493613 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
NUDCD3-210ENST00000493613 UBR2Q8IWV8 1755 aa14□□□□□ -0.17
NUDCD3-210ENST00000493613 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
NUDCD3-210ENST00000493613 ADCY9O60503 1353 aa13.99□□□□□ -0.17
NUDCD3-210ENST00000493613 NFATC2IPQ8NCF5 419 aa13.99□□□□□ -0.17
NUDCD3-210ENST00000493613 AFDNP55196 1824 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-210ENST00000493613 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 PTCD1O75127 700 aaKnown RBP13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 ADRA2BP18089 450 aa13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 IL13P35225 146 aa13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 NLGN1Q8N2Q7 840 aa13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
NUDCD3-210ENST00000493613 SIPA1L3O60292 1781 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-210ENST00000493613 RPS6KA4O75676 772 aa13.97□□□□□ -0.17
NUDCD3-210ENST00000493613 RFC4P35249 363 aa13.97□□□□□ -0.17
NUDCD3-210ENST00000493613 MRC1P22897 1456 aa13.97□□□□□ -0.17
NUDCD3-210ENST00000493613 GYS1P13807 737 aa13.96□□□□□ -0.17
NUDCD3-210ENST00000493613 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-210ENST00000493613 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 TGFB2P61812 414 aa13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 DLEC1Q9Y238 1755 aa13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 SBF1O95248 1867 aa13.95□□□□□ -0.18
NUDCD3-210ENST00000493613 HMOX1P09601 288 aa13.94□□□□□ -0.18
NUDCD3-210ENST00000493613 CCDC87Q9NVE4 849 aa13.94□□□□□ -0.18
NUDCD3-210ENST00000493613 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
NUDCD3-210ENST00000493613 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
NUDCD3-210ENST00000493613 A0A0G2JLW4 131 aa13.93□□□□□ -0.18
NUDCD3-210ENST00000493613 SLC52A2Q9HAB3 445 aa13.93□□□□□ -0.18
NUDCD3-210ENST00000493613 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
NUDCD3-210ENST00000493613 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
NUDCD3-210ENST00000493613 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-210ENST00000493613 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-210ENST00000493613 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
NUDCD3-210ENST00000493613 BCS1LQ9Y276 419 aa13.92□□□□□ -0.18
NUDCD3-210ENST00000493613 PER1O15534 1290 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-210ENST00000493613 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-210ENST00000493613 SRP68Q9UHB9 627 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-210ENST00000493613 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-210ENST00000493613 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-210ENST00000493613 DPEP1P16444 411 aa13.9□□□□□ -0.18
NUDCD3-210ENST00000493613 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-210ENST00000493613 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 FKBP8Q14318 412 aa13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
NUDCD3-210ENST00000493613 FCHSD2O94868 740 aa13.88□□□□□ -0.19
NUDCD3-210ENST00000493613 DDR1Q08345 913 aa13.88□□□□□ -0.19
NUDCD3-210ENST00000493613 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
NUDCD3-210ENST00000493613 ARHGAP27Q6ZUM4 889 aa13.88□□□□□ -0.19
NUDCD3-210ENST00000493613 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-210ENST00000493613 COL15A1P39059 1388 aa13.87□□□□□ -0.19
NUDCD3-210ENST00000493613 ANKRD31Q8N7Z5 1873 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms