RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
IRF1-210ENST00000493208 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
IRF1-210ENST00000493208 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
IRF1-210ENST00000493208 ITGB4P16144 1822 aa18.23■□□□□ 0.51
IRF1-210ENST00000493208 YY1P25490 414 aa18.23■□□□□ 0.51
IRF1-210ENST00000493208 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
IRF1-210ENST00000493208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
IRF1-210ENST00000493208 GNPATO15228 680 aa18.22■□□□□ 0.51
IRF1-210ENST00000493208 NEFMP07197 916 aa18.22■□□□□ 0.51
IRF1-210ENST00000493208 ADRA2BP18089 450 aa18.22■□□□□ 0.51
IRF1-210ENST00000493208 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
IRF1-210ENST00000493208 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
IRF1-210ENST00000493208 PHF14O94880 888 aa18.21■□□□□ 0.51
IRF1-210ENST00000493208 HMOX1P09601 288 aa18.21■□□□□ 0.51
IRF1-210ENST00000493208 GPR162Q16538 588 aa18.2■□□□□ 0.5
IRF1-210ENST00000493208 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
IRF1-210ENST00000493208 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
IRF1-210ENST00000493208 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
IRF1-210ENST00000493208 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
IRF1-210ENST00000493208 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
IRF1-210ENST00000493208 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
IRF1-210ENST00000493208 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
IRF1-210ENST00000493208 CNTNAP4Q9C0A0 1308 aa18.18■□□□□ 0.5
IRF1-210ENST00000493208 GRIN3BO60391 1043 aa18.17■□□□□ 0.5
IRF1-210ENST00000493208 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
IRF1-210ENST00000493208 RFC4P35249 363 aa18.16■□□□□ 0.5
IRF1-210ENST00000493208 TEFQ10587 303 aa18.16■□□□□ 0.5
IRF1-210ENST00000493208 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
IRF1-210ENST00000493208 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
IRF1-210ENST00000493208 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
IRF1-210ENST00000493208 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
IRF1-210ENST00000493208 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
IRF1-210ENST00000493208 ITPK1Q13572 414 aa18.15■□□□□ 0.5
IRF1-210ENST00000493208 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
IRF1-210ENST00000493208 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
IRF1-210ENST00000493208 GNAT3A8MTJ3 354 aa18.14■□□□□ 0.49
IRF1-210ENST00000493208 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
IRF1-210ENST00000493208 MTHFSDQ2M296 383 aaKnown RBP18.14■□□□□ 0.49
IRF1-210ENST00000493208 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.49
IRF1-210ENST00000493208 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
IRF1-210ENST00000493208 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
IRF1-210ENST00000493208 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
IRF1-210ENST00000493208 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
IRF1-210ENST00000493208 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
IRF1-210ENST00000493208 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
IRF1-210ENST00000493208 NPM2Q86SE8 214 aaKnown RBP18.12■□□□□ 0.49
IRF1-210ENST00000493208 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
IRF1-210ENST00000493208 FCHSD2O94868 740 aa18.11■□□□□ 0.49
IRF1-210ENST00000493208 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
IRF1-210ENST00000493208 STARD3NLO95772 234 aa18.1■□□□□ 0.49
IRF1-210ENST00000493208 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
IRF1-210ENST00000493208 MRC1P22897 1456 aa18.09■□□□□ 0.49
IRF1-210ENST00000493208 CRKLP46109 303 aaKnown RBP18.09■□□□□ 0.49
IRF1-210ENST00000493208 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
IRF1-210ENST00000493208 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
IRF1-210ENST00000493208 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
IRF1-210ENST00000493208 ZPR1O75312 459 aa18.08■□□□□ 0.48
IRF1-210ENST00000493208 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
IRF1-210ENST00000493208 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
IRF1-210ENST00000493208 LGR6Q9HBX8 967 aa18.08■□□□□ 0.48
IRF1-210ENST00000493208 SCN11AQ9UI33 1791 aa18.08■□□□□ 0.48
IRF1-210ENST00000493208 MMP10P09238 476 aa18.06■□□□□ 0.48
IRF1-210ENST00000493208 RALBP1Q15311 655 aa18.06■□□□□ 0.48
IRF1-210ENST00000493208 SLC4A9Q96Q91 983 aa18.06■□□□□ 0.48
IRF1-210ENST00000493208 A0A087WZG4 1122 aa18.05■□□□□ 0.48
IRF1-210ENST00000493208 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
IRF1-210ENST00000493208 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
IRF1-210ENST00000493208 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
IRF1-210ENST00000493208 TGFB2P61812 414 aa18.04■□□□□ 0.48
IRF1-210ENST00000493208 FMNL2Q96PY5 1086 aa18.04■□□□□ 0.48
IRF1-210ENST00000493208 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
IRF1-210ENST00000493208 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
IRF1-210ENST00000493208 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
IRF1-210ENST00000493208 ZNF790Q6PG37 636 aa18.03■□□□□ 0.48
IRF1-210ENST00000493208 GYS1P13807 737 aa18.02■□□□□ 0.48
IRF1-210ENST00000493208 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
IRF1-210ENST00000493208 SLC39A6Q13433 755 aa18.02■□□□□ 0.48
IRF1-210ENST00000493208 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.48
IRF1-210ENST00000493208 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
IRF1-210ENST00000493208 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
IRF1-210ENST00000493208 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
IRF1-210ENST00000493208 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
IRF1-210ENST00000493208 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
IRF1-210ENST00000493208 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
IRF1-210ENST00000493208 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
IRF1-210ENST00000493208 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
IRF1-210ENST00000493208 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
IRF1-210ENST00000493208 CEMIPQ8WUJ3 1361 aa17.99■□□□□ 0.47
IRF1-210ENST00000493208 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
IRF1-210ENST00000493208 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
IRF1-210ENST00000493208 NARFQ9UHQ1 456 aa17.98■□□□□ 0.47
IRF1-210ENST00000493208 COL15A1P39059 1388 aa17.98■□□□□ 0.47
IRF1-210ENST00000493208 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
IRF1-210ENST00000493208 CHD4Q14839 1912 aa17.97■□□□□ 0.47
IRF1-210ENST00000493208 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
IRF1-210ENST00000493208 TJP1Q07157 1748 aa17.96■□□□□ 0.47
IRF1-210ENST00000493208 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
IRF1-210ENST00000493208 ZNF784Q8NCA9 323 aaPredicted RBP17.96■□□□□ 0.47
IRF1-210ENST00000493208 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.46
IRF1-210ENST00000493208 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms