RNA–Protein interactions for RNA: ENST00000492422.1

CCDC30-210, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-210ENST00000492422 PTK7Q13308 1070 aa9.73□□□□□ -0.85
CCDC30-210ENST00000492422 CRTC2Q53ET0 693 aaPredicted RBP9.73□□□□□ -0.85
CCDC30-210ENST00000492422 TPCN2Q8NHX9 752 aa9.73□□□□□ -0.85
CCDC30-210ENST00000492422 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
CCDC30-210ENST00000492422 ACIN1Q9UKV3 1341 aaKnown RBP9.73□□□□□ -0.85
CCDC30-210ENST00000492422 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L10C9JJH3 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L12C9JPN9 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L21D6R901 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 DKK1O94907 266 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CCDC30-210ENST00000492422 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC30-210ENST00000492422 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
CCDC30-210ENST00000492422 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 GRIP2Q9C0E4 1043 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 DNMT3LQ9UJW3 386 aa9.72□□□□□ -0.85
CCDC30-210ENST00000492422 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
CCDC30-210ENST00000492422 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
CCDC30-210ENST00000492422 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
CCDC30-210ENST00000492422 ZNF358Q9NW07 568 aa9.71□□□□□ -0.86
CCDC30-210ENST00000492422 M0R2N6 131 aa9.7□□□□□ -0.86
CCDC30-210ENST00000492422 SMTNP53814 917 aa9.7□□□□□ -0.86
CCDC30-210ENST00000492422 PDE4CQ08493 712 aa9.7□□□□□ -0.86
CCDC30-210ENST00000492422 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
CCDC30-210ENST00000492422 FHDC1Q9C0D6 1143 aaPredicted RBP9.7□□□□□ -0.86
CCDC30-210ENST00000492422 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
CCDC30-210ENST00000492422 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
CCDC30-210ENST00000492422 ATG7O95352 703 aa9.69□□□□□ -0.86
CCDC30-210ENST00000492422 TLR1Q15399 786 aa9.69□□□□□ -0.86
CCDC30-210ENST00000492422 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
CCDC30-210ENST00000492422 ZSCAN10Q96SZ4 725 aaPredicted RBP9.69□□□□□ -0.86
CCDC30-210ENST00000492422 SEC13P55735 322 aa9.68□□□□□ -0.86
CCDC30-210ENST00000492422 DPYDQ12882 1025 aa9.68□□□□□ -0.86
CCDC30-210ENST00000492422 ELOAQ14241 798 aaKnown RBP9.68□□□□□ -0.86
CCDC30-210ENST00000492422 MTFR1Q15390 333 aa9.68□□□□□ -0.86
CCDC30-210ENST00000492422 A6NJY4 79 aa9.67□□□□□ -0.86
CCDC30-210ENST00000492422 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
CCDC30-210ENST00000492422 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
CCDC30-210ENST00000492422 PRICKLE2Q7Z3G6 844 aa9.67□□□□□ -0.86
CCDC30-210ENST00000492422 USTQ9Y2C2 406 aa9.67□□□□□ -0.86
CCDC30-210ENST00000492422 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
CCDC30-210ENST00000492422 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
CCDC30-210ENST00000492422 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
CCDC30-210ENST00000492422 TMEM214Q6NUQ4 689 aaKnown RBP9.66□□□□□ -0.86
CCDC30-210ENST00000492422 PPARGC1BQ86YN6 1023 aaKnown RBP9.66□□□□□ -0.86
CCDC30-210ENST00000492422 FAM200AQ8TCP9 573 aa9.66□□□□□ -0.86
CCDC30-210ENST00000492422 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
CCDC30-210ENST00000492422 EPHA4P54764 986 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 POU4F2Q12837 409 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 GNASQ5JWF2 1037 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 NBPF10Q6P3W6 841 aaKnown RBP9.64□□□□□ -0.87
CCDC30-210ENST00000492422 TAS1R3Q7RTX0 852 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 TNS4Q8IZW8 715 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 NBPF15Q8N660 670 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 RHBDD1Q8TEB9 315 aa9.64□□□□□ -0.87
CCDC30-210ENST00000492422 SCHIP1Q9P0W5 487 aaPredicted RBP9.64□□□□□ -0.87
CCDC30-210ENST00000492422 FOXK2Q01167 660 aa9.63□□□□□ -0.87
CCDC30-210ENST00000492422 PTSQ03393 145 aa9.63□□□□□ -0.87
CCDC30-210ENST00000492422 TSEN2Q8NCE0 465 aaKnown RBP9.63□□□□□ -0.87
CCDC30-210ENST00000492422 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CCDC30-210ENST00000492422 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
CCDC30-210ENST00000492422 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 RHOQP17081 205 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
CCDC30-210ENST00000492422 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
CCDC30-210ENST00000492422 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
CCDC30-210ENST00000492422 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
CCDC30-210ENST00000492422 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
CCDC30-210ENST00000492422 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 ZNF295-AS1Q8N0V1 137 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 CCDC155Q8N6L0 562 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 TIMMDC1Q9NPL8 285 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 USP3Q9Y6I4 520 aa9.59□□□□□ -0.87
CCDC30-210ENST00000492422 PHKA2P46019 1235 aa9.58□□□□□ -0.88
CCDC30-210ENST00000492422 SWI5Q1ZZU3 235 aa9.58□□□□□ -0.88
CCDC30-210ENST00000492422 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
CCDC30-210ENST00000492422 TSPAN10Q9H1Z9 355 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-210ENST00000492422 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
CCDC30-210ENST00000492422 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
CCDC30-210ENST00000492422 TEAD4Q15561 434 aa9.57□□□□□ -0.88
CCDC30-210ENST00000492422 TMEM164Q5U3C3 297 aa9.57□□□□□ -0.88
CCDC30-210ENST00000492422 ATAD2Q6PL18 1390 aa9.56□□□□□ -0.88
CCDC30-210ENST00000492422 A0A1B0GTH6 734 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms