RNA–Protein interactions for RNA: ENST00000492422.1

CCDC30-210, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-210ENST00000492422 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
CCDC30-210ENST00000492422 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
CCDC30-210ENST00000492422 PHF23Q9BUL5 403 aaPredicted RBP22.92■■□□□ 1.26
CCDC30-210ENST00000492422 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
CCDC30-210ENST00000492422 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
CCDC30-210ENST00000492422 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CCDC30-210ENST00000492422 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
CCDC30-210ENST00000492422 ADRA2BP18089 450 aa20.17■□□□□ 0.82
CCDC30-210ENST00000492422 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
CCDC30-210ENST00000492422 MSH5O43196 834 aa19.33■□□□□ 0.68
CCDC30-210ENST00000492422 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
CCDC30-210ENST00000492422 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
CCDC30-210ENST00000492422 KCNA4P22459 653 aa18.29■□□□□ 0.52
CCDC30-210ENST00000492422 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
CCDC30-210ENST00000492422 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
CCDC30-210ENST00000492422 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
CCDC30-210ENST00000492422 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
CCDC30-210ENST00000492422 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
CCDC30-210ENST00000492422 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
CCDC30-210ENST00000492422 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
CCDC30-210ENST00000492422 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
CCDC30-210ENST00000492422 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
CCDC30-210ENST00000492422 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
CCDC30-210ENST00000492422 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
CCDC30-210ENST00000492422 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
CCDC30-210ENST00000492422 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
CCDC30-210ENST00000492422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC30-210ENST00000492422 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
CCDC30-210ENST00000492422 ZBTB22O15209 634 aa16.82■□□□□ 0.28
CCDC30-210ENST00000492422 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
CCDC30-210ENST00000492422 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
CCDC30-210ENST00000492422 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
CCDC30-210ENST00000492422 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
CCDC30-210ENST00000492422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
CCDC30-210ENST00000492422 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
CCDC30-210ENST00000492422 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
CCDC30-210ENST00000492422 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
CCDC30-210ENST00000492422 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
CCDC30-210ENST00000492422 APLP2Q06481 763 aa16.27■□□□□ 0.2
CCDC30-210ENST00000492422 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
CCDC30-210ENST00000492422 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CCDC30-210ENST00000492422 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
CCDC30-210ENST00000492422 CAPN15O75808 1086 aa16.03■□□□□ 0.16
CCDC30-210ENST00000492422 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
CCDC30-210ENST00000492422 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
CCDC30-210ENST00000492422 DSG3P32926 999 aa15.76■□□□□ 0.11
CCDC30-210ENST00000492422 POLA2Q14181 598 aa15.74■□□□□ 0.11
CCDC30-210ENST00000492422 ABCB7O75027 752 aa15.71■□□□□ 0.11
CCDC30-210ENST00000492422 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
CCDC30-210ENST00000492422 FBLN2P98095 1184 aa15.47■□□□□ 0.07
CCDC30-210ENST00000492422 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
CCDC30-210ENST00000492422 FKBP8Q14318 412 aa15.17■□□□□ 0.02
CCDC30-210ENST00000492422 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CCDC30-210ENST00000492422 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
CCDC30-210ENST00000492422 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
CCDC30-210ENST00000492422 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
CCDC30-210ENST00000492422 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
CCDC30-210ENST00000492422 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
CCDC30-210ENST00000492422 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
CCDC30-210ENST00000492422 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
CCDC30-210ENST00000492422 PROM2Q8N271 834 aa14.89□□□□□ -0.03
CCDC30-210ENST00000492422 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
CCDC30-210ENST00000492422 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC30-210ENST00000492422 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
CCDC30-210ENST00000492422 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
CCDC30-210ENST00000492422 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
CCDC30-210ENST00000492422 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
CCDC30-210ENST00000492422 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
CCDC30-210ENST00000492422 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
CCDC30-210ENST00000492422 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
CCDC30-210ENST00000492422 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
CCDC30-210ENST00000492422 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
CCDC30-210ENST00000492422 MIER1Q8N108 512 aa14.34□□□□□ -0.11
CCDC30-210ENST00000492422 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
CCDC30-210ENST00000492422 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
CCDC30-210ENST00000492422 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC30-210ENST00000492422 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
CCDC30-210ENST00000492422 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
CCDC30-210ENST00000492422 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
CCDC30-210ENST00000492422 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
CCDC30-210ENST00000492422 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
CCDC30-210ENST00000492422 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
CCDC30-210ENST00000492422 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
CCDC30-210ENST00000492422 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
CCDC30-210ENST00000492422 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
CCDC30-210ENST00000492422 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
CCDC30-210ENST00000492422 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC30-210ENST00000492422 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
CCDC30-210ENST00000492422 POTEHQ6S545 545 aa13.99□□□□□ -0.17
CCDC30-210ENST00000492422 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
CCDC30-210ENST00000492422 NUBP1P53384 320 aa13.96□□□□□ -0.17
CCDC30-210ENST00000492422 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
CCDC30-210ENST00000492422 GSE1Q14687 1217 aa13.85□□□□□ -0.19
CCDC30-210ENST00000492422 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
CCDC30-210ENST00000492422 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
CCDC30-210ENST00000492422 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
CCDC30-210ENST00000492422 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
CCDC30-210ENST00000492422 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
CCDC30-210ENST00000492422 PKD2Q13563 968 aa13.77□□□□□ -0.21
CCDC30-210ENST00000492422 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms