RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
SPTAN1-208ENST00000491712 SSFA2P28290 1259 aa18.21■□□□□ 0.51
SPTAN1-208ENST00000491712 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
SPTAN1-208ENST00000491712 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
SPTAN1-208ENST00000491712 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
SPTAN1-208ENST00000491712 UTRNP46939 3433 aa18.19■□□□□ 0.5
SPTAN1-208ENST00000491712 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
SPTAN1-208ENST00000491712 PHF14O94880 888 aa18.19■□□□□ 0.5
SPTAN1-208ENST00000491712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.18■□□□□ 0.5
SPTAN1-208ENST00000491712 AKAP4Q5JQC9 854 aa18.18■□□□□ 0.5
SPTAN1-208ENST00000491712 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
SPTAN1-208ENST00000491712 GNPATO15228 680 aa18.17■□□□□ 0.5
SPTAN1-208ENST00000491712 GPR162Q16538 588 aa18.17■□□□□ 0.5
SPTAN1-208ENST00000491712 MSL1Q68DK7 614 aa18.17■□□□□ 0.5
SPTAN1-208ENST00000491712 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
SPTAN1-208ENST00000491712 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
SPTAN1-208ENST00000491712 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
SPTAN1-208ENST00000491712 CHD4Q14839 1912 aa18.15■□□□□ 0.5
SPTAN1-208ENST00000491712 HMOX1P09601 288 aa18.15■□□□□ 0.5
SPTAN1-208ENST00000491712 ITPK1Q13572 414 aa18.15■□□□□ 0.5
SPTAN1-208ENST00000491712 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
SPTAN1-208ENST00000491712 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
SPTAN1-208ENST00000491712 COL5A3P25940 1745 aaPredicted RBP18.13■□□□□ 0.49
SPTAN1-208ENST00000491712 GOLGB1Q14789 3259 aaKnown RBP18.13■□□□□ 0.49
SPTAN1-208ENST00000491712 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
SPTAN1-208ENST00000491712 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
SPTAN1-208ENST00000491712 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
SPTAN1-208ENST00000491712 ADRA2BP18089 450 aa18.12■□□□□ 0.49
SPTAN1-208ENST00000491712 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
SPTAN1-208ENST00000491712 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
SPTAN1-208ENST00000491712 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
SPTAN1-208ENST00000491712 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
SPTAN1-208ENST00000491712 TRAPPC3LQ5T215 181 aa18.11■□□□□ 0.49
SPTAN1-208ENST00000491712 VIRMAQ69YN4 1812 aaKnown RBP18.11■□□□□ 0.49
SPTAN1-208ENST00000491712 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SPTAN1-208ENST00000491712 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
SPTAN1-208ENST00000491712 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
SPTAN1-208ENST00000491712 MRC1P22897 1456 aa18.09■□□□□ 0.49
SPTAN1-208ENST00000491712 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
SPTAN1-208ENST00000491712 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
SPTAN1-208ENST00000491712 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
SPTAN1-208ENST00000491712 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
SPTAN1-208ENST00000491712 RFC4P35249 363 aa18.08■□□□□ 0.48
SPTAN1-208ENST00000491712 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.48
SPTAN1-208ENST00000491712 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-208ENST00000491712 RPS6KA4O75676 772 aa18.07■□□□□ 0.48
SPTAN1-208ENST00000491712 MTHFSDQ2M296 383 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-208ENST00000491712 NLGN1Q8N2Q7 840 aa18.07■□□□□ 0.48
SPTAN1-208ENST00000491712 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
SPTAN1-208ENST00000491712 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
SPTAN1-208ENST00000491712 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
SPTAN1-208ENST00000491712 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
SPTAN1-208ENST00000491712 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
SPTAN1-208ENST00000491712 TJP1Q07157 1748 aa18.05■□□□□ 0.48
SPTAN1-208ENST00000491712 MMP10P09238 476 aa18.04■□□□□ 0.48
SPTAN1-208ENST00000491712 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
SPTAN1-208ENST00000491712 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
SPTAN1-208ENST00000491712 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
SPTAN1-208ENST00000491712 TEFQ10587 303 aa18.03■□□□□ 0.48
SPTAN1-208ENST00000491712 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
SPTAN1-208ENST00000491712 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
SPTAN1-208ENST00000491712 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
SPTAN1-208ENST00000491712 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
SPTAN1-208ENST00000491712 ZNF784Q8NCA9 323 aaPredicted RBP18.01■□□□□ 0.47
SPTAN1-208ENST00000491712 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
SPTAN1-208ENST00000491712 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
SPTAN1-208ENST00000491712 GYS1P13807 737 aa18■□□□□ 0.47
SPTAN1-208ENST00000491712 PRKAR2BP31323 418 aa18■□□□□ 0.47
SPTAN1-208ENST00000491712 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
SPTAN1-208ENST00000491712 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
SPTAN1-208ENST00000491712 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
SPTAN1-208ENST00000491712 NEFMP07197 916 aa17.99■□□□□ 0.47
SPTAN1-208ENST00000491712 YBX3P16989 372 aaKnown RBP eCLIP17.99■□□□□ 0.47
SPTAN1-208ENST00000491712 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
SPTAN1-208ENST00000491712 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
SPTAN1-208ENST00000491712 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
SPTAN1-208ENST00000491712 ZPR1O75312 459 aa17.98■□□□□ 0.47
SPTAN1-208ENST00000491712 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
SPTAN1-208ENST00000491712 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
SPTAN1-208ENST00000491712 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
SPTAN1-208ENST00000491712 FCHSD2O94868 740 aa17.97■□□□□ 0.47
SPTAN1-208ENST00000491712 STARD3NLO95772 234 aa17.97■□□□□ 0.47
SPTAN1-208ENST00000491712 TGFB2P61812 414 aa17.97■□□□□ 0.47
SPTAN1-208ENST00000491712 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
SPTAN1-208ENST00000491712 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
SPTAN1-208ENST00000491712 INTS5Q6P9B9 1019 aaKnown RBP17.96■□□□□ 0.47
SPTAN1-208ENST00000491712 TEX13AQ9BXU3 409 aaPredicted RBP17.96■□□□□ 0.47
SPTAN1-208ENST00000491712 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
SPTAN1-208ENST00000491712 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
SPTAN1-208ENST00000491712 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
SPTAN1-208ENST00000491712 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
SPTAN1-208ENST00000491712 COL15A1P39059 1388 aa17.94■□□□□ 0.46
SPTAN1-208ENST00000491712 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
SPTAN1-208ENST00000491712 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
SPTAN1-208ENST00000491712 CEMIPQ8WUJ3 1361 aa17.93■□□□□ 0.46
SPTAN1-208ENST00000491712 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
SPTAN1-208ENST00000491712 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
SPTAN1-208ENST00000491712 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
SPTAN1-208ENST00000491712 PXDNLA1KZ92 1463 aa17.93■□□□□ 0.46
SPTAN1-208ENST00000491712 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms