RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 PHKG2P15735 406 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 SIK1P57059 783 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 EIF4A2Q14240 407 aaKnown RBP11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
PCOLCE-209ENST00000490909 SSFA2P28290 1259 aa11.71□□□□□ -0.53
PCOLCE-209ENST00000490909 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
PCOLCE-209ENST00000490909 SMARCC1Q92922 1105 aaPredicted RBP11.71□□□□□ -0.53
PCOLCE-209ENST00000490909 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
PCOLCE-209ENST00000490909 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
PCOLCE-209ENST00000490909 SPG7Q9UQ90 795 aa11.7□□□□□ -0.54
PCOLCE-209ENST00000490909 GNPATO15228 680 aa11.69□□□□□ -0.54
PCOLCE-209ENST00000490909 ATG3Q9NT62 314 aa11.69□□□□□ -0.54
PCOLCE-209ENST00000490909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.54
PCOLCE-209ENST00000490909 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
PCOLCE-209ENST00000490909 MRC1P22897 1456 aa11.69□□□□□ -0.54
PCOLCE-209ENST00000490909 UBR2Q8IWV8 1755 aa11.68□□□□□ -0.54
PCOLCE-209ENST00000490909 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
PCOLCE-209ENST00000490909 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
PCOLCE-209ENST00000490909 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
PCOLCE-209ENST00000490909 IFNL2Q8IZJ0 200 aa11.67□□□□□ -0.54
PCOLCE-209ENST00000490909 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
PCOLCE-209ENST00000490909 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
PCOLCE-209ENST00000490909 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
PCOLCE-209ENST00000490909 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
PCOLCE-209ENST00000490909 CNTNAP4Q9C0A0 1308 aa11.65□□□□□ -0.54
PCOLCE-209ENST00000490909 MMP10P09238 476 aa11.65□□□□□ -0.54
PCOLCE-209ENST00000490909 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
PCOLCE-209ENST00000490909 SBF1O95248 1867 aa11.65□□□□□ -0.54
PCOLCE-209ENST00000490909 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.55
PCOLCE-209ENST00000490909 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
PCOLCE-209ENST00000490909 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
PCOLCE-209ENST00000490909 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
PCOLCE-209ENST00000490909 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
PCOLCE-209ENST00000490909 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
PCOLCE-209ENST00000490909 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
PCOLCE-209ENST00000490909 TIAM2Q8IVF5 1701 aa11.63□□□□□ -0.55
PCOLCE-209ENST00000490909 KIF3CO14782 793 aa11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 GYS1P13807 737 aa11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 PCNTO95613 3336 aa11.62□□□□□ -0.55
PCOLCE-209ENST00000490909 ERVV-2B6SEH9 535 aa11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 PANK3Q9H999 370 aa11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 COL3A1P02461 1466 aaPredicted RBP11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
PCOLCE-209ENST00000490909 HSPA6P17066 643 aa11.6□□□□□ -0.55
PCOLCE-209ENST00000490909 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
PCOLCE-209ENST00000490909 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
PCOLCE-209ENST00000490909 ADRA2BP18089 450 aa11.59□□□□□ -0.55
PCOLCE-209ENST00000490909 DDR1Q08345 913 aa11.59□□□□□ -0.55
PCOLCE-209ENST00000490909 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
PCOLCE-209ENST00000490909 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
PCOLCE-209ENST00000490909 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 DPEP1P16444 411 aa11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
PCOLCE-209ENST00000490909 PTCD1O75127 700 aaKnown RBP11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 HSP90AB1P08238 724 aaKnown RBP11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 KCNA3P22001 575 aa11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 IL13P35225 146 aa11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
PCOLCE-209ENST00000490909 CABP4P57796 275 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 TGFB2P61812 414 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 FKBP8Q14318 412 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 SULT6B1Q6IMI4 303 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
PCOLCE-209ENST00000490909 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 RFC4P35249 363 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 INTS5Q6P9B9 1019 aaKnown RBP11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 MORC1Q86VD1 984 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 NMRK2Q9NPI5 230 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 CCDC87Q9NVE4 849 aa11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
PCOLCE-209ENST00000490909 COL15A1P39059 1388 aa11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 MTHFSP49914 203 aa11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
PCOLCE-209ENST00000490909 FCHSD2O94868 740 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms