RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
SUPT20H-220ENST00000490716 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
SUPT20H-220ENST00000490716 SLC15A2Q16348 729 aa12.47□□□□□ -0.41
SUPT20H-220ENST00000490716 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
SUPT20H-220ENST00000490716 FCHSD2O94868 740 aa12.46□□□□□ -0.41
SUPT20H-220ENST00000490716 IL17REQ8NFR9 667 aa12.46□□□□□ -0.41
SUPT20H-220ENST00000490716 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
SUPT20H-220ENST00000490716 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.41
SUPT20H-220ENST00000490716 ITPK1Q13572 414 aa12.46□□□□□ -0.42
SUPT20H-220ENST00000490716 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
SUPT20H-220ENST00000490716 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
SUPT20H-220ENST00000490716 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
SUPT20H-220ENST00000490716 SLC52A2Q9HAB3 445 aa12.45□□□□□ -0.42
SUPT20H-220ENST00000490716 PPM1GO15355 546 aaPredicted RBP12.44□□□□□ -0.42
SUPT20H-220ENST00000490716 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
SUPT20H-220ENST00000490716 NUP98P52948 1817 aa12.44□□□□□ -0.42
SUPT20H-220ENST00000490716 ASAP1Q9ULH1 1129 aa12.44□□□□□ -0.42
SUPT20H-220ENST00000490716 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
SUPT20H-220ENST00000490716 A0A0G2JS52 829 aa12.43□□□□□ -0.42
SUPT20H-220ENST00000490716 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
SUPT20H-220ENST00000490716 MYT1Q01538 1121 aa12.43□□□□□ -0.42
SUPT20H-220ENST00000490716 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
SUPT20H-220ENST00000490716 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
SUPT20H-220ENST00000490716 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
SUPT20H-220ENST00000490716 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
SUPT20H-220ENST00000490716 HMOX1P09601 288 aa12.42□□□□□ -0.42
SUPT20H-220ENST00000490716 DDX10Q13206 875 aaKnown RBP12.42□□□□□ -0.42
SUPT20H-220ENST00000490716 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
SUPT20H-220ENST00000490716 N4BP2Q86UW6 1770 aaPredicted RBP12.41□□□□□ -0.42
SUPT20H-220ENST00000490716 LAMB2P55268 1798 aa12.41□□□□□ -0.42
SUPT20H-220ENST00000490716 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
SUPT20H-220ENST00000490716 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
SUPT20H-220ENST00000490716 CCDC184Q52MB2 194 aa12.4□□□□□ -0.42
SUPT20H-220ENST00000490716 INTS5Q6P9B9 1019 aaKnown RBP12.4□□□□□ -0.42
SUPT20H-220ENST00000490716 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
SUPT20H-220ENST00000490716 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
SUPT20H-220ENST00000490716 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
SUPT20H-220ENST00000490716 SIK1P57059 783 aa12.39□□□□□ -0.43
SUPT20H-220ENST00000490716 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
SUPT20H-220ENST00000490716 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
SUPT20H-220ENST00000490716 SMARCC1Q92922 1105 aaPredicted RBP12.39□□□□□ -0.43
SUPT20H-220ENST00000490716 CHD4Q14839 1912 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 KCNQ4P56696 695 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
SUPT20H-220ENST00000490716 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
SUPT20H-220ENST00000490716 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
SUPT20H-220ENST00000490716 GNAT3A8MTJ3 354 aa12.37□□□□□ -0.43
SUPT20H-220ENST00000490716 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
SUPT20H-220ENST00000490716 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
SUPT20H-220ENST00000490716 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
SUPT20H-220ENST00000490716 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
SUPT20H-220ENST00000490716 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 SBF1O95248 1867 aa12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 SSFA2P28290 1259 aa12.35□□□□□ -0.43
SUPT20H-220ENST00000490716 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 PNISRQ8TF01 805 aaKnown RBP12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 NBPF14Q5TI25 921 aa12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 CFAP53Q96M91 514 aa12.34□□□□□ -0.43
SUPT20H-220ENST00000490716 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
SUPT20H-220ENST00000490716 BABAM1Q9NWV8 329 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 KCNQ3O43525 872 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
SUPT20H-220ENST00000490716 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 ZNF646O15015 1829 aaPredicted RBP12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 DICER1Q9UPY3 1922 aaKnown RBP12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 RGL2O15211 777 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 RPS6KA4O75676 772 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 ADRA2BP18089 450 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 CABP4P57796 275 aa12.31□□□□□ -0.44
SUPT20H-220ENST00000490716 ZNF521Q96K83 1311 aa12.3□□□□□ -0.44
SUPT20H-220ENST00000490716 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
SUPT20H-220ENST00000490716 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
SUPT20H-220ENST00000490716 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 ZNF496Q96IT1 587 aaPredicted RBP12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 TM4SF1P30408 202 aa12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 SMIM5Q71RC9 77 aa12.29□□□□□ -0.44
SUPT20H-220ENST00000490716 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
SUPT20H-220ENST00000490716 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms