RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 MMP10P09238 476 aa21.42■■□□□ 1.02
LMNB2-203ENST00000490554 KDRP35968 1356 aa21.41■■□□□ 1.02
LMNB2-203ENST00000490554 HSPA6P17066 643 aa21.4■■□□□ 1.02
LMNB2-203ENST00000490554 IFFO2Q5TF58 517 aa21.4■■□□□ 1.02
LMNB2-203ENST00000490554 SLC4A9Q96Q91 983 aa21.4■■□□□ 1.02
LMNB2-203ENST00000490554 TIMELESSQ9UNS1 1208 aa21.4■■□□□ 1.02
LMNB2-203ENST00000490554 ERVV-2B6SEH9 535 aa21.39■■□□□ 1.01
LMNB2-203ENST00000490554 TNNT2P45379 298 aaPredicted RBP21.39■■□□□ 1.01
LMNB2-203ENST00000490554 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.01
LMNB2-203ENST00000490554 RTCBQ9Y3I0 505 aaKnown RBP21.39■■□□□ 1.01
LMNB2-203ENST00000490554 TRAPPC3LQ5T215 181 aa21.38■■□□□ 1.01
LMNB2-203ENST00000490554 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
LMNB2-203ENST00000490554 TGFB2P61812 414 aa21.37■■□□□ 1.01
LMNB2-203ENST00000490554 RC3H1Q5TC82 1133 aaKnown RBP21.37■■□□□ 1.01
LMNB2-203ENST00000490554 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
LMNB2-203ENST00000490554 DCAF5Q96JK2 942 aa21.37■■□□□ 1.01
LMNB2-203ENST00000490554 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
LMNB2-203ENST00000490554 KIF3CO14782 793 aa21.36■■□□□ 1.01
LMNB2-203ENST00000490554 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
LMNB2-203ENST00000490554 RBM42Q9BTD8 480 aaKnown RBP21.36■■□□□ 1.01
LMNB2-203ENST00000490554 CNTNAP4Q9C0A0 1308 aa21.35■■□□□ 1.01
LMNB2-203ENST00000490554 ADRA2BP18089 450 aa21.35■■□□□ 1.01
LMNB2-203ENST00000490554 ARHGEF1Q92888 912 aaKnown RBP21.35■■□□□ 1.01
LMNB2-203ENST00000490554 POLR3GLQ9BT43 218 aa21.35■■□□□ 1.01
LMNB2-203ENST00000490554 PLEKHO1Q53GL0 409 aaPredicted RBP21.34■■□□□ 1.01
LMNB2-203ENST00000490554 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
LMNB2-203ENST00000490554 A0A0G2JLW4 131 aa21.33■■□□□ 1.01
LMNB2-203ENST00000490554 RPS6KA4O75676 772 aa21.33■■□□□ 1.01
LMNB2-203ENST00000490554 GYS1P13807 737 aa21.33■■□□□ 1.01
LMNB2-203ENST00000490554 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
LMNB2-203ENST00000490554 KDM6AO15550 1401 aaPredicted RBP21.32■■□□□ 1
LMNB2-203ENST00000490554 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
LMNB2-203ENST00000490554 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
LMNB2-203ENST00000490554 BCS1LQ9Y276 419 aa21.32■■□□□ 1
LMNB2-203ENST00000490554 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
LMNB2-203ENST00000490554 RFC4P35249 363 aa21.31■■□□□ 1
LMNB2-203ENST00000490554 CABP4P57796 275 aa21.31■■□□□ 1
LMNB2-203ENST00000490554 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
LMNB2-203ENST00000490554 CCDC87Q9NVE4 849 aa21.31■■□□□ 1
LMNB2-203ENST00000490554 DPEP1P16444 411 aa21.29■■□□□ 1
LMNB2-203ENST00000490554 PANK3Q9H999 370 aa21.29■■□□□ 1
LMNB2-203ENST00000490554 PARP3Q9Y6F1 533 aa21.28■■□□□ 1
LMNB2-203ENST00000490554 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
LMNB2-203ENST00000490554 MTHFSP49914 203 aa21.27■■□□□ 1
LMNB2-203ENST00000490554 ARHGAP27Q6ZUM4 889 aa21.27■■□□□ 1
LMNB2-203ENST00000490554 AEBP1Q8IUX7 1158 aa21.27■■□□□ 1
LMNB2-203ENST00000490554 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
LMNB2-203ENST00000490554 CLSPNQ9HAW4 1339 aa21.27■□□□□ 0.99
LMNB2-203ENST00000490554 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
LMNB2-203ENST00000490554 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
LMNB2-203ENST00000490554 FCHSD2O94868 740 aa21.26■□□□□ 0.99
LMNB2-203ENST00000490554 KCNA3P22001 575 aa21.26■□□□□ 0.99
LMNB2-203ENST00000490554 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
LMNB2-203ENST00000490554 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
LMNB2-203ENST00000490554 NFATC2IPQ8NCF5 419 aa21.25■□□□□ 0.99
LMNB2-203ENST00000490554 TOMM70O94826 608 aa21.24■□□□□ 0.99
LMNB2-203ENST00000490554 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.99
LMNB2-203ENST00000490554 MYH14Q7Z406 1995 aaKnown RBP21.24■□□□□ 0.99
LMNB2-203ENST00000490554 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
LMNB2-203ENST00000490554 MORC1Q86VD1 984 aa21.23■□□□□ 0.99
LMNB2-203ENST00000490554 SRP68Q9UHB9 627 aaKnown RBP21.23■□□□□ 0.99
LMNB2-203ENST00000490554 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
LMNB2-203ENST00000490554 APLP1P51693 650 aa21.22■□□□□ 0.99
LMNB2-203ENST00000490554 FKBP8Q14318 412 aa21.22■□□□□ 0.99
LMNB2-203ENST00000490554 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
LMNB2-203ENST00000490554 NMRK2Q9NPI5 230 aa21.22■□□□□ 0.99
LMNB2-203ENST00000490554 DDR1Q08345 913 aa21.21■□□□□ 0.99
LMNB2-203ENST00000490554 PIM2Q9P1W9 311 aa21.21■□□□□ 0.99
LMNB2-203ENST00000490554 C9orf131Q5VYM1 1079 aa21.2■□□□□ 0.98
LMNB2-203ENST00000490554 IL13P35225 146 aa21.19■□□□□ 0.98
LMNB2-203ENST00000490554 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
LMNB2-203ENST00000490554 BRCA1P38398 1863 aaKnown RBP21.19■□□□□ 0.98
LMNB2-203ENST00000490554 DALRD3Q5D0E6 543 aaKnown RBP21.18■□□□□ 0.98
LMNB2-203ENST00000490554 DNAJC5GQ8N7S2 189 aa21.17■□□□□ 0.98
LMNB2-203ENST00000490554 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
LMNB2-203ENST00000490554 TJP1Q07157 1748 aa21.16■□□□□ 0.98
LMNB2-203ENST00000490554 POLRMTO00411 1230 aaKnown RBP21.16■□□□□ 0.98
LMNB2-203ENST00000490554 TM4SF1P30408 202 aa21.16■□□□□ 0.98
LMNB2-203ENST00000490554 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
LMNB2-203ENST00000490554 CHRNA5P30532 468 aa21.15■□□□□ 0.98
LMNB2-203ENST00000490554 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
LMNB2-203ENST00000490554 RBM46Q8TBY0 533 aaKnown RBP21.15■□□□□ 0.98
LMNB2-203ENST00000490554 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
LMNB2-203ENST00000490554 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
LMNB2-203ENST00000490554 ARFGEF1Q9Y6D6 1849 aa21.14■□□□□ 0.97
LMNB2-203ENST00000490554 LGR6Q9HBX8 967 aa21.14■□□□□ 0.97
LMNB2-203ENST00000490554 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
LMNB2-203ENST00000490554 ADAMTS7Q9UKP4 1686 aa21.13■□□□□ 0.97
LMNB2-203ENST00000490554 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
LMNB2-203ENST00000490554 RNF181Q9P0P0 153 aa21.13■□□□□ 0.97
LMNB2-203ENST00000490554 ZPR1O75312 459 aa21.12■□□□□ 0.97
LMNB2-203ENST00000490554 SCN11AQ9UI33 1791 aa21.12■□□□□ 0.97
LMNB2-203ENST00000490554 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
LMNB2-203ENST00000490554 CYP19A1P11511 503 aaPredicted RBP21.11■□□□□ 0.97
LMNB2-203ENST00000490554 AMER1Q5JTC6 1135 aaPredicted RBP21.11■□□□□ 0.97
LMNB2-203ENST00000490554 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
LMNB2-203ENST00000490554 KCPQ6ZWJ8 1503 aa21.1■□□□□ 0.97
LMNB2-203ENST00000490554 SLC39A6Q13433 755 aa21.1■□□□□ 0.97
LMNB2-203ENST00000490554 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
LMNB2-203ENST00000490554 MRC1P22897 1456 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms