RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SIK1P57059 783 aa20.75■□□□□ 0.91
PCCB-218ENST00000490504 COL23A1Q86Y22 540 aaPredicted RBP20.75■□□□□ 0.91
PCCB-218ENST00000490504 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
PCCB-218ENST00000490504 KDM6AO15550 1401 aaPredicted RBP20.74■□□□□ 0.91
PCCB-218ENST00000490504 ARXQ96QS3 562 aa20.74■□□□□ 0.91
PCCB-218ENST00000490504 ITGB4P16144 1822 aa20.73■□□□□ 0.91
PCCB-218ENST00000490504 MSH5O43196 834 aa20.73■□□□□ 0.91
PCCB-218ENST00000490504 FHDC1Q9C0D6 1143 aaPredicted RBP20.73■□□□□ 0.91
PCCB-218ENST00000490504 CABP4P57796 275 aa20.72■□□□□ 0.91
PCCB-218ENST00000490504 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
PCCB-218ENST00000490504 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
PCCB-218ENST00000490504 ITPK1Q13572 414 aa20.71■□□□□ 0.91
PCCB-218ENST00000490504 AMIGO3Q86WK7 504 aa20.71■□□□□ 0.91
PCCB-218ENST00000490504 SYT17Q9BSW7 474 aa20.71■□□□□ 0.91
PCCB-218ENST00000490504 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
PCCB-218ENST00000490504 SMIM5Q71RC9 77 aa20.71■□□□□ 0.91
PCCB-218ENST00000490504 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
PCCB-218ENST00000490504 AK7Q96M32 723 aa20.7■□□□□ 0.9
PCCB-218ENST00000490504 AKAP4Q5JQC9 854 aa20.69■□□□□ 0.9
PCCB-218ENST00000490504 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
PCCB-218ENST00000490504 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
PCCB-218ENST00000490504 POLD1P28340 1107 aa20.68■□□□□ 0.9
PCCB-218ENST00000490504 NFATC2IPQ8NCF5 419 aa20.68■□□□□ 0.9
PCCB-218ENST00000490504 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 MTHFSDQ2M296 383 aaKnown RBP20.67■□□□□ 0.9
PCCB-218ENST00000490504 MSL1Q68DK7 614 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 FLAD1Q8NFF5 587 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 RBM42Q9BTD8 480 aaKnown RBP20.67■□□□□ 0.9
PCCB-218ENST00000490504 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 C5P01031 1676 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCCB-218ENST00000490504 LGR6Q9HBX8 967 aa20.67■□□□□ 0.9
PCCB-218ENST00000490504 PHF14O94880 888 aa20.66■□□□□ 0.9
PCCB-218ENST00000490504 C4BP0C0L5 1744 aa20.65■□□□□ 0.9
PCCB-218ENST00000490504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.65■□□□□ 0.9
PCCB-218ENST00000490504 GNPATO15228 680 aa20.64■□□□□ 0.89
PCCB-218ENST00000490504 RNMTO43148 476 aaKnown RBP20.64■□□□□ 0.89
PCCB-218ENST00000490504 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
PCCB-218ENST00000490504 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
PCCB-218ENST00000490504 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
PCCB-218ENST00000490504 KLHL34Q8N239 644 aa20.63■□□□□ 0.89
PCCB-218ENST00000490504 MAP3K5Q99683 1374 aa20.63■□□□□ 0.89
PCCB-218ENST00000490504 SSFA2P28290 1259 aa20.62■□□□□ 0.89
PCCB-218ENST00000490504 SLC52A2Q9HAB3 445 aa20.62■□□□□ 0.89
PCCB-218ENST00000490504 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
PCCB-218ENST00000490504 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
PCCB-218ENST00000490504 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.89
PCCB-218ENST00000490504 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
PCCB-218ENST00000490504 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
PCCB-218ENST00000490504 CNTNAP4Q9C0A0 1308 aa20.57■□□□□ 0.88
PCCB-218ENST00000490504 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
PCCB-218ENST00000490504 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
PCCB-218ENST00000490504 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
PCCB-218ENST00000490504 TRAPPC3LQ5T215 181 aa20.56■□□□□ 0.88
PCCB-218ENST00000490504 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
PCCB-218ENST00000490504 UTRNP46939 3433 aa20.55■□□□□ 0.88
PCCB-218ENST00000490504 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
PCCB-218ENST00000490504 RPS6KA4O75676 772 aa20.54■□□□□ 0.88
PCCB-218ENST00000490504 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
PCCB-218ENST00000490504 MRC1P22897 1456 aa20.54■□□□□ 0.88
PCCB-218ENST00000490504 YY1P25490 414 aa20.53■□□□□ 0.88
PCCB-218ENST00000490504 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
PCCB-218ENST00000490504 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
PCCB-218ENST00000490504 SCN11AQ9UI33 1791 aa20.53■□□□□ 0.88
PCCB-218ENST00000490504 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
PCCB-218ENST00000490504 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
PCCB-218ENST00000490504 FCHSD2O94868 740 aa20.51■□□□□ 0.87
PCCB-218ENST00000490504 ADRA2BP18089 450 aa20.51■□□□□ 0.87
PCCB-218ENST00000490504 GPR162Q16538 588 aa20.51■□□□□ 0.87
PCCB-218ENST00000490504 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
PCCB-218ENST00000490504 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
PCCB-218ENST00000490504 NEFLP07196 543 aa20.49■□□□□ 0.87
PCCB-218ENST00000490504 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
PCCB-218ENST00000490504 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
PCCB-218ENST00000490504 ADAMTS7Q9UKP4 1686 aa20.49■□□□□ 0.87
PCCB-218ENST00000490504 RFC4P35249 363 aa20.49■□□□□ 0.87
PCCB-218ENST00000490504 TEFQ10587 303 aa20.49■□□□□ 0.87
PCCB-218ENST00000490504 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
PCCB-218ENST00000490504 MMP10P09238 476 aa20.48■□□□□ 0.87
PCCB-218ENST00000490504 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
PCCB-218ENST00000490504 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
PCCB-218ENST00000490504 GYS1P13807 737 aa20.47■□□□□ 0.87
PCCB-218ENST00000490504 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
PCCB-218ENST00000490504 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
PCCB-218ENST00000490504 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
PCCB-218ENST00000490504 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
PCCB-218ENST00000490504 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
PCCB-218ENST00000490504 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
PCCB-218ENST00000490504 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.87
PCCB-218ENST00000490504 VSIG10Q8N0Z9 540 aa20.45■□□□□ 0.87
PCCB-218ENST00000490504 SRP68Q9UHB9 627 aaKnown RBP20.45■□□□□ 0.87
PCCB-218ENST00000490504 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
PCCB-218ENST00000490504 YBX3P16989 372 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCCB-218ENST00000490504 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms