RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 FSHRP23945 695 aa10.18□□□□□ -0.78
TM9SF3-206ENST00000490192 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
TM9SF3-206ENST00000490192 DKK1O94907 266 aa10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 SNRPBP14678 240 aaKnown RBP10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 SIX5Q8N196 739 aa10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 EGFL7Q9UHF1 273 aa10.17□□□□□ -0.78
TM9SF3-206ENST00000490192 H3BRB1 525 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 UPP2O95045 317 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 TRIM46Q7Z4K8 759 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 ANO2Q9NQ90 1003 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 DOLKQ9UPQ8 538 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
TM9SF3-206ENST00000490192 NR3C2P08235 984 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 SEC13P55735 322 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 OCLNQ16625 522 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 OXLD1Q5BKU9 147 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 MRPL14Q6P1L8 145 aaKnown RBP10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 CCDC116Q8IYX3 515 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 ITPKCQ96DU7 683 aa10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
TM9SF3-206ENST00000490192 GTF2IP78347 998 aa10.14□□□□□ -0.79
TM9SF3-206ENST00000490192 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
TM9SF3-206ENST00000490192 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
TM9SF3-206ENST00000490192 ZFAND3Q9H8U3 227 aa10.14□□□□□ -0.79
TM9SF3-206ENST00000490192 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
TM9SF3-206ENST00000490192 ICMTO60725 284 aa10.13□□□□□ -0.79
TM9SF3-206ENST00000490192 CCDC102BQ68D86 513 aa10.13□□□□□ -0.79
TM9SF3-206ENST00000490192 DZIP3Q86Y13 1208 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-206ENST00000490192 KCTD15Q96SI1 283 aaPredicted RBP10.13□□□□□ -0.79
TM9SF3-206ENST00000490192 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
TM9SF3-206ENST00000490192 SFI1A8K8P3 1242 aa10.12□□□□□ -0.79
TM9SF3-206ENST00000490192 MAPK1P28482 360 aa10.12□□□□□ -0.79
TM9SF3-206ENST00000490192 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
TM9SF3-206ENST00000490192 TREML4Q6UXN2 200 aa10.12□□□□□ -0.79
TM9SF3-206ENST00000490192 PURBQ96QR8 312 aaKnown RBP10.12□□□□□ -0.79
TM9SF3-206ENST00000490192 TAGLNQ01995 201 aaKnown RBP10.11□□□□□ -0.79
TM9SF3-206ENST00000490192 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
TM9SF3-206ENST00000490192 TPCN2Q8NHX9 752 aa10.11□□□□□ -0.79
TM9SF3-206ENST00000490192 LGR5O75473 907 aa10.1□□□□□ -0.79
TM9SF3-206ENST00000490192 WFS1O76024 890 aa10.1□□□□□ -0.79
TM9SF3-206ENST00000490192 VAMP1P23763 118 aa10.1□□□□□ -0.79
TM9SF3-206ENST00000490192 FBXO33Q7Z6M2 555 aa10.1□□□□□ -0.79
TM9SF3-206ENST00000490192 C21orf2O43822 256 aa10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 BMP2P12643 396 aa10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 PSME1Q06323 249 aa10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 PPP1R26Q5T8A7 1209 aaPredicted RBP10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 GTF3C2Q8WUA4 911 aaPredicted RBP10.09□□□□□ -0.79
TM9SF3-206ENST00000490192 GIGYF1O75420 1035 aaPredicted RBP10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 ASB16Q96NS5 453 aa10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 HINFPQ9BQA5 517 aa10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 SEPT3Q9UH03 358 aa10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 DCTN4Q9UJW0 460 aa10.08□□□□□ -0.8
TM9SF3-206ENST00000490192 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 ECM1Q16610 540 aa10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 PCDHGA11Q9Y5H2 935 aa10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
TM9SF3-206ENST00000490192 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
TM9SF3-206ENST00000490192 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
TM9SF3-206ENST00000490192 MEIOBQ8N635 442 aa10.06□□□□□ -0.8
TM9SF3-206ENST00000490192 MAN1A2O60476 641 aa10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 RECKO95980 971 aa10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 RAB15P59190 212 aa10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 FKBP4Q02790 459 aaKnown RBP eCLIP10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
TM9SF3-206ENST00000490192 ARHGAP4P98171 946 aa10.04□□□□□ -0.8
TM9SF3-206ENST00000490192 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
TM9SF3-206ENST00000490192 INTS6LQ5JSJ4 861 aaKnown RBP10.04□□□□□ -0.8
TM9SF3-206ENST00000490192 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
TM9SF3-206ENST00000490192 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
TM9SF3-206ENST00000490192 DRC1Q96MC2 740 aa10.03□□□□□ -0.8
TM9SF3-206ENST00000490192 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
TM9SF3-206ENST00000490192 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 WEE1P30291 646 aa10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 NFX1Q12986 1120 aaKnown RBP10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 USP4Q13107 963 aa10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 TSEN2Q8NCE0 465 aaKnown RBP10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 SREK1Q8WXA9 508 aaKnown RBP10.02□□□□□ -0.81
TM9SF3-206ENST00000490192 ZC3H6P61129 1189 aaKnown RBP10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 CBLBQ13191 982 aa10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 COL19A1Q14993 1142 aa10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 TSNAXIP1Q2TAA8 658 aa10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 EAPPQ56P03 285 aaPredicted RBP10.01□□□□□ -0.81
TM9SF3-206ENST00000490192 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms