RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TDO2P48775 406 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 FKBP15Q5T1M5 1219 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 GOLGA6L10A0A0M3HER8 536 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 ZNF530Q6P9A1 599 aaPredicted RBP10.33□□□□□ -0.76
LSAMP-205ENST00000490035 KIAA1328Q86T90 577 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 RALGAPBQ86X10 1494 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 TAOK3Q9H2K8 898 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 POLR3GO15318 223 aaPredicted RBP10.33□□□□□ -0.76
LSAMP-205ENST00000490035 ZSCAN30Q86W11 494 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 LRRC27Q9C0I9 530 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 ARHGAP29Q52LW3 1261 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 AACSQ86V21 672 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 CRACR2AQ9BSW2 395 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 NSD3Q9BZ95 1437 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 ENOX2Q16206 610 aaKnown RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 TUBB4AP04350 444 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 SPA17Q15506 151 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 MICALCLQ6ZW33 695 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 UBXN4Q92575 508 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 KIF5CO60282 957 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 SLFN5Q08AF3 891 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 TRAF1Q13077 416 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 PROSER2Q86WR7 435 aaPredicted RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 GTPBP4Q9BZE4 634 aaKnown RBP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 SFPQP23246 707 aaKnown RBP eCLIP10.32□□□□□ -0.76
LSAMP-205ENST00000490035 CCDC150Q8NCX0 1101 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 IL16Q14005 1332 aa10.32□□□□□ -0.76
LSAMP-205ENST00000490035 FOSBP53539 338 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TMEM132EQ6IEE7 984 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 MYZAPP0CAP1 466 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 AMPD3Q01432 767 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TMOD2Q9NZR1 351 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 USO1O60763 962 aaKnown RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 PPP4R3AQ6IN85 833 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 A0A087WZG4 1122 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 ESPNB1AK53 854 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
LSAMP-205ENST00000490035 CETN1Q12798 172 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 HMG20BQ9P0W2 317 aa10.31□□□□□ -0.76
LSAMP-205ENST00000490035 TTLL5Q6EMB2 1281 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 FILIP1Q7Z7B0 1213 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 PAF1Q8N7H5 531 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 TMCO3Q6UWJ1 677 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 FAM114A1Q8IWE2 563 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 AIDAQ96BJ3 306 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 TOM1L2Q6ZVM7 507 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 IQCA1Q86XH1 822 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 JAKMIP1Q96N16 626 aaKnown RBP10.3□□□□□ -0.76
LSAMP-205ENST00000490035 WDHD1O75717 1129 aaPredicted RBP10.3□□□□□ -0.76
LSAMP-205ENST00000490035 PTPN14Q15678 1187 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 DDX19AQ9NUU7 478 aaKnown RBP10.3□□□□□ -0.76
LSAMP-205ENST00000490035 NAIPQ13075 1403 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 TTC21AQ8NDW8 1320 aa10.3□□□□□ -0.76
LSAMP-205ENST00000490035 CGNQ9P2M7 1197 aaKnown RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 STAMBPO95630 424 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 CCDC178Q5BJE1 867 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 SPC24Q8NBT2 197 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 CABP1Q9NZU7 370 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 BMP15O95972 392 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 IFI16Q16666 785 aaKnown RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 FKBP4Q02790 459 aaKnown RBP eCLIP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 IFIT1P09914 478 aaKnown RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 CCDC172P0C7W6 258 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 NF2P35240 595 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 ZNF76P36508 570 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 MAP3K12Q12852 859 aa10.29□□□□□ -0.76
LSAMP-205ENST00000490035 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 TAF7Q15545 349 aaPredicted RBP10.29□□□□□ -0.76
LSAMP-205ENST00000490035 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
LSAMP-205ENST00000490035 CASTP20810 708 aaKnown RBP10.28□□□□□ -0.76
LSAMP-205ENST00000490035 CFAP100Q494V2 611 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 SLC12A5Q9H2X9 1139 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 CASQ1P31415 396 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 PAFAH1B1P43034 410 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 GOLIM4O00461 696 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 MX1P20591 662 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 UQCRHLA0A096LP55 91 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms