RNA–Protein interactions for RNA: ENST00000489493.1

NUP205-207, Transcript of nucleoporin 205, humanhuman

TSL 4

Gene NUP205, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP205-207ENST00000489493 ATG3Q9NT62 314 aa18.07■□□□□ 0.48
NUP205-207ENST00000489493 EIF4A2Q14240 407 aaKnown RBP18.06■□□□□ 0.48
NUP205-207ENST00000489493 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
NUP205-207ENST00000489493 KDRP35968 1356 aa18.04■□□□□ 0.48
NUP205-207ENST00000489493 ERVV-2B6SEH9 535 aa18.04■□□□□ 0.48
NUP205-207ENST00000489493 ITGB4P16144 1822 aa18.04■□□□□ 0.48
NUP205-207ENST00000489493 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
NUP205-207ENST00000489493 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
NUP205-207ENST00000489493 MMP10P09238 476 aa18.02■□□□□ 0.48
NUP205-207ENST00000489493 DCAF5Q96JK2 942 aa18.02■□□□□ 0.48
NUP205-207ENST00000489493 ADRA2BP18089 450 aa18.01■□□□□ 0.47
NUP205-207ENST00000489493 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
NUP205-207ENST00000489493 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
NUP205-207ENST00000489493 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
NUP205-207ENST00000489493 SLC4A9Q96Q91 983 aa18.01■□□□□ 0.47
NUP205-207ENST00000489493 RTCBQ9Y3I0 505 aaKnown RBP18.01■□□□□ 0.47
NUP205-207ENST00000489493 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
NUP205-207ENST00000489493 TGFB2P61812 414 aa18■□□□□ 0.47
NUP205-207ENST00000489493 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
NUP205-207ENST00000489493 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
NUP205-207ENST00000489493 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
NUP205-207ENST00000489493 HSPA6P17066 643 aa17.98■□□□□ 0.47
NUP205-207ENST00000489493 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
NUP205-207ENST00000489493 WWC3Q9ULE0 1092 aa17.98■□□□□ 0.47
NUP205-207ENST00000489493 PXDNLA1KZ92 1463 aa17.98■□□□□ 0.47
NUP205-207ENST00000489493 RPS6KA4O75676 772 aa17.97■□□□□ 0.47
NUP205-207ENST00000489493 ARHGEF1Q92888 912 aaKnown RBP17.97■□□□□ 0.47
NUP205-207ENST00000489493 CEP350Q5VT06 3117 aa17.97■□□□□ 0.47
NUP205-207ENST00000489493 CICQ96RK0 1608 aaPredicted RBP17.97■□□□□ 0.47
NUP205-207ENST00000489493 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
NUP205-207ENST00000489493 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
NUP205-207ENST00000489493 PANK3Q9H999 370 aa17.96■□□□□ 0.47
NUP205-207ENST00000489493 KDM6AO15550 1401 aaPredicted RBP17.96■□□□□ 0.47
NUP205-207ENST00000489493 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
NUP205-207ENST00000489493 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
NUP205-207ENST00000489493 KIF3CO14782 793 aa17.95■□□□□ 0.46
NUP205-207ENST00000489493 GYS1P13807 737 aa17.95■□□□□ 0.46
NUP205-207ENST00000489493 CABP4P57796 275 aa17.95■□□□□ 0.46
NUP205-207ENST00000489493 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
NUP205-207ENST00000489493 RFC4P35249 363 aa17.94■□□□□ 0.46
NUP205-207ENST00000489493 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
NUP205-207ENST00000489493 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
NUP205-207ENST00000489493 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
NUP205-207ENST00000489493 MTHFSP49914 203 aa17.93■□□□□ 0.46
NUP205-207ENST00000489493 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
NUP205-207ENST00000489493 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
NUP205-207ENST00000489493 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
NUP205-207ENST00000489493 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
NUP205-207ENST00000489493 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
NUP205-207ENST00000489493 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
NUP205-207ENST00000489493 DPEP1P16444 411 aa17.9■□□□□ 0.46
NUP205-207ENST00000489493 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
NUP205-207ENST00000489493 NFATC2IPQ8NCF5 419 aa17.9■□□□□ 0.46
NUP205-207ENST00000489493 KIF13BQ9NQT8 1826 aa17.9■□□□□ 0.46
NUP205-207ENST00000489493 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
NUP205-207ENST00000489493 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
NUP205-207ENST00000489493 KCNA3P22001 575 aa17.88■□□□□ 0.45
NUP205-207ENST00000489493 IL13P35225 146 aa17.88■□□□□ 0.45
NUP205-207ENST00000489493 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
NUP205-207ENST00000489493 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
NUP205-207ENST00000489493 KIAA1551Q9HCM1 1747 aa17.88■□□□□ 0.45
NUP205-207ENST00000489493 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
NUP205-207ENST00000489493 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
NUP205-207ENST00000489493 TOMM70O94826 608 aa17.87■□□□□ 0.45
NUP205-207ENST00000489493 FCHSD2O94868 740 aa17.87■□□□□ 0.45
NUP205-207ENST00000489493 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
NUP205-207ENST00000489493 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
NUP205-207ENST00000489493 APLP1P51693 650 aa17.85■□□□□ 0.45
NUP205-207ENST00000489493 FKBP8Q14318 412 aa17.85■□□□□ 0.45
NUP205-207ENST00000489493 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
NUP205-207ENST00000489493 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
NUP205-207ENST00000489493 DDR1Q08345 913 aa17.84■□□□□ 0.45
NUP205-207ENST00000489493 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
NUP205-207ENST00000489493 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
NUP205-207ENST00000489493 TM4SF1P30408 202 aa17.82■□□□□ 0.44
NUP205-207ENST00000489493 DALRD3Q5D0E6 543 aaKnown RBP17.82■□□□□ 0.44
NUP205-207ENST00000489493 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
NUP205-207ENST00000489493 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
NUP205-207ENST00000489493 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
NUP205-207ENST00000489493 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
NUP205-207ENST00000489493 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
NUP205-207ENST00000489493 SOS1Q07889 1333 aaPredicted RBP17.8■□□□□ 0.44
NUP205-207ENST00000489493 N4BP2Q86UW6 1770 aaPredicted RBP17.8■□□□□ 0.44
NUP205-207ENST00000489493 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
NUP205-207ENST00000489493 ZPR1O75312 459 aa17.79■□□□□ 0.44
NUP205-207ENST00000489493 CYP19A1P11511 503 aaPredicted RBP17.79■□□□□ 0.44
NUP205-207ENST00000489493 DNAJC10Q8IXB1 793 aa17.79■□□□□ 0.44
NUP205-207ENST00000489493 DNAJC5GQ8N7S2 189 aa17.79■□□□□ 0.44
NUP205-207ENST00000489493 RBM46Q8TBY0 533 aaKnown RBP17.79■□□□□ 0.44
NUP205-207ENST00000489493 MRC1P22897 1456 aa17.79■□□□□ 0.44
NUP205-207ENST00000489493 CHRNA5P30532 468 aa17.78■□□□□ 0.44
NUP205-207ENST00000489493 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
NUP205-207ENST00000489493 TJP1Q07157 1748 aa17.78■□□□□ 0.44
NUP205-207ENST00000489493 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.44
NUP205-207ENST00000489493 USPL1Q5W0Q7 1092 aa17.77■□□□□ 0.44
NUP205-207ENST00000489493 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.44
NUP205-207ENST00000489493 NARFQ9UHQ1 456 aa17.77■□□□□ 0.44
NUP205-207ENST00000489493 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
NUP205-207ENST00000489493 ADAMTS7Q9UKP4 1686 aa17.76■□□□□ 0.43
NUP205-207ENST00000489493 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms