RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 WASLO00401 505 aaPredicted RBP11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 MMP10P09238 476 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 LMNB1P20700 586 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 RASSF7Q02833 373 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
EXOSC3-206ENST00000489414 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-206ENST00000489414 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
EXOSC3-206ENST00000489414 CAPNS2Q96L46 248 aa11.6□□□□□ -0.55
EXOSC3-206ENST00000489414 GPR101Q96P66 508 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-206ENST00000489414 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
EXOSC3-206ENST00000489414 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 POGKQ9P215 609 aa11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 NSD3Q9BZ95 1437 aa11.59□□□□□ -0.55
EXOSC3-206ENST00000489414 BRCA2P51587 3418 aa11.58□□□□□ -0.55
EXOSC3-206ENST00000489414 PHF14O94880 888 aa11.58□□□□□ -0.56
EXOSC3-206ENST00000489414 ACEP12821 1306 aa11.58□□□□□ -0.56
EXOSC3-206ENST00000489414 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 IL2RBP14784 551 aa11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 ECE1P42892 770 aa11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 ABT1Q9ULW3 272 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-206ENST00000489414 CACNA1AO00555 2505 aa11.56□□□□□ -0.56
EXOSC3-206ENST00000489414 USP47Q96K76 1375 aa11.56□□□□□ -0.56
EXOSC3-206ENST00000489414 C4AP0C0L4 1744 aa11.56□□□□□ -0.56
EXOSC3-206ENST00000489414 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 SSFA2P28290 1259 aa11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 MAP2K2P36507 400 aa11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 CYP4F22Q6NT55 531 aa11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 AK7Q96M32 723 aa11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
EXOSC3-206ENST00000489414 ROCK1Q13464 1354 aa11.54□□□□□ -0.56
EXOSC3-206ENST00000489414 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
EXOSC3-206ENST00000489414 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
EXOSC3-206ENST00000489414 ARHGEF25Q86VW2 580 aa11.53□□□□□ -0.56
EXOSC3-206ENST00000489414 SCN4AP35499 1836 aa11.53□□□□□ -0.56
EXOSC3-206ENST00000489414 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
EXOSC3-206ENST00000489414 AOC2O75106 756 aa11.52□□□□□ -0.57
EXOSC3-206ENST00000489414 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
EXOSC3-206ENST00000489414 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
EXOSC3-206ENST00000489414 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
EXOSC3-206ENST00000489414 GRM1Q13255 1194 aa11.51□□□□□ -0.57
EXOSC3-206ENST00000489414 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
EXOSC3-206ENST00000489414 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
EXOSC3-206ENST00000489414 CEP290O15078 2479 aa11.49□□□□□ -0.57
EXOSC3-206ENST00000489414 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
EXOSC3-206ENST00000489414 TAF1DQ9H5J8 278 aaPredicted RBP11.49□□□□□ -0.57
EXOSC3-206ENST00000489414 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
EXOSC3-206ENST00000489414 IQCA1LA6NCM1 817 aa11.48□□□□□ -0.57
EXOSC3-206ENST00000489414 NLRP6P59044 892 aa11.48□□□□□ -0.57
EXOSC3-206ENST00000489414 MUC3AQ02505 3323 aa11.48□□□□□ -0.57
EXOSC3-206ENST00000489414 PALLDQ8WX93 1383 aa11.47□□□□□ -0.57
EXOSC3-206ENST00000489414 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
EXOSC3-206ENST00000489414 CFAP70Q5T0N1 1121 aa11.47□□□□□ -0.57
EXOSC3-206ENST00000489414 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
EXOSC3-206ENST00000489414 NFKBIEO00221 500 aa11.46□□□□□ -0.57
EXOSC3-206ENST00000489414 CHRNA5P30532 468 aa11.46□□□□□ -0.57
EXOSC3-206ENST00000489414 FAM50AQ14320 339 aaKnown RBP11.46□□□□□ -0.57
EXOSC3-206ENST00000489414 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
EXOSC3-206ENST00000489414 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.57
EXOSC3-206ENST00000489414 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
EXOSC3-206ENST00000489414 PLA2G5P39877 138 aa11.45□□□□□ -0.58
EXOSC3-206ENST00000489414 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
EXOSC3-206ENST00000489414 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
EXOSC3-206ENST00000489414 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
EXOSC3-206ENST00000489414 COL9A1P20849 921 aa11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 MAP1SQ66K74 1059 aaPredicted RBP11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 CTU1Q7Z7A3 348 aaKnown RBP11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 CENPFP49454 3210 aa11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 NFAT5O94916 1531 aa11.44□□□□□ -0.58
EXOSC3-206ENST00000489414 TMF1P82094 1093 aa11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 RGL3Q3MIN7 710 aa11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 EAPPQ56P03 285 aaPredicted RBP11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
EXOSC3-206ENST00000489414 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
EXOSC3-206ENST00000489414 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
EXOSC3-206ENST00000489414 SNX27Q96L92 541 aa11.42□□□□□ -0.58
EXOSC3-206ENST00000489414 TRAK1Q9UPV9 953 aa11.42□□□□□ -0.58
EXOSC3-206ENST00000489414 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
EXOSC3-206ENST00000489414 NBPF1Q3BBV0 1214 aa11.41□□□□□ -0.58
EXOSC3-206ENST00000489414 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
EXOSC3-206ENST00000489414 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
EXOSC3-206ENST00000489414 HTTP42858 3142 aa11.41□□□□□ -0.58
EXOSC3-206ENST00000489414 GNPATO15228 680 aa11.4□□□□□ -0.58
EXOSC3-206ENST00000489414 KCNH5Q8NCM2 988 aa11.4□□□□□ -0.58
EXOSC3-206ENST00000489414 LINC00116Q8NCU8 138 aa11.4□□□□□ -0.58
EXOSC3-206ENST00000489414 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
EXOSC3-206ENST00000489414 CST9Q5W186 159 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms