RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 DZIP1LQ8IYY4 767 aaKnown RBP23.11■■□□□ 1.29
CD40-206ENST00000489304 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
CD40-206ENST00000489304 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
CD40-206ENST00000489304 TEFQ10587 303 aa23.1■■□□□ 1.29
CD40-206ENST00000489304 AAMPQ13685 434 aa23.1■■□□□ 1.29
CD40-206ENST00000489304 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
CD40-206ENST00000489304 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
CD40-206ENST00000489304 KCNQ3O43525 872 aa23.09■■□□□ 1.29
CD40-206ENST00000489304 TRIM27P14373 513 aa23.09■■□□□ 1.29
CD40-206ENST00000489304 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
CD40-206ENST00000489304 DISP2A7MBM2 1401 aa23.09■■□□□ 1.29
CD40-206ENST00000489304 NGLY1Q96IV0 654 aa23.08■■□□□ 1.28
CD40-206ENST00000489304 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
CD40-206ENST00000489304 FTSJ3Q8IY81 847 aaKnown RBP23.07■■□□□ 1.28
CD40-206ENST00000489304 DDX54Q8TDD1 881 aaKnown RBP23.07■■□□□ 1.28
CD40-206ENST00000489304 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
CD40-206ENST00000489304 SPATA31A1Q5TZJ5 1347 aa23.07■■□□□ 1.28
CD40-206ENST00000489304 CACNA1FO60840 1977 aa23.06■■□□□ 1.28
CD40-206ENST00000489304 PCDH11XQ9BZA7 1347 aa23.06■■□□□ 1.28
CD40-206ENST00000489304 PCDH11YQ9BZA8 1340 aa23.06■■□□□ 1.28
CD40-206ENST00000489304 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
CD40-206ENST00000489304 MVPQ14764 893 aaKnown RBP23.05■■□□□ 1.28
CD40-206ENST00000489304 SHANK3Q9BYB0 1731 aa23.05■■□□□ 1.28
CD40-206ENST00000489304 DCAF5Q96JK2 942 aa23.05■■□□□ 1.28
CD40-206ENST00000489304 NWD2Q9ULI1 1742 aa23.04■■□□□ 1.28
CD40-206ENST00000489304 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
CD40-206ENST00000489304 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
CD40-206ENST00000489304 UNC5CLQ8IV45 518 aa23.03■■□□□ 1.28
CD40-206ENST00000489304 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
CD40-206ENST00000489304 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
CD40-206ENST00000489304 BCL9LQ86UU0 1499 aa23.03■■□□□ 1.28
CD40-206ENST00000489304 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
CD40-206ENST00000489304 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
CD40-206ENST00000489304 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
CD40-206ENST00000489304 FNBP4Q8N3X1 1017 aaPredicted RBP23.01■■□□□ 1.27
CD40-206ENST00000489304 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
CD40-206ENST00000489304 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
CD40-206ENST00000489304 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
CD40-206ENST00000489304 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
CD40-206ENST00000489304 DDX19BQ9UMR2 479 aa22.99■■□□□ 1.27
CD40-206ENST00000489304 MEX3CQ5U5Q3 659 aaKnown RBP22.99■■□□□ 1.27
CD40-206ENST00000489304 TMEM57Q8N5G2 664 aa22.99■■□□□ 1.27
CD40-206ENST00000489304 MRC1P22897 1456 aa22.98■■□□□ 1.27
CD40-206ENST00000489304 ABCC4O15439 1325 aa22.98■■□□□ 1.27
CD40-206ENST00000489304 NECTIN2Q92692 538 aa22.98■■□□□ 1.27
CD40-206ENST00000489304 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
CD40-206ENST00000489304 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
CD40-206ENST00000489304 CABP4P57796 275 aa22.97■■□□□ 1.27
CD40-206ENST00000489304 CENPQQ7L2Z9 268 aaPredicted RBP22.97■■□□□ 1.27
CD40-206ENST00000489304 USP21Q9UK80 565 aa22.97■■□□□ 1.27
CD40-206ENST00000489304 EXOC5O00471 708 aa22.96■■□□□ 1.27
CD40-206ENST00000489304 VPS72Q15906 364 aa22.96■■□□□ 1.27
CD40-206ENST00000489304 HOXB7P09629 217 aa22.96■■□□□ 1.27
CD40-206ENST00000489304 ITPRIPQ8IWB1 547 aa22.96■■□□□ 1.27
CD40-206ENST00000489304 PTPRCP08575 1304 aa22.95■■□□□ 1.26
CD40-206ENST00000489304 CCDC30Q5VVM6 783 aa22.95■■□□□ 1.26
CD40-206ENST00000489304 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
CD40-206ENST00000489304 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
CD40-206ENST00000489304 ZNF790Q6PG37 636 aa22.94■■□□□ 1.26
CD40-206ENST00000489304 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
CD40-206ENST00000489304 RGS12O14924 1447 aa22.93■■□□□ 1.26
CD40-206ENST00000489304 TNS2Q63HR2 1409 aa22.93■■□□□ 1.26
CD40-206ENST00000489304 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
CD40-206ENST00000489304 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
CD40-206ENST00000489304 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
CD40-206ENST00000489304 CHMP4AQ9BY43 222 aa22.93■■□□□ 1.26
CD40-206ENST00000489304 HEG1Q9ULI3 1381 aa22.93■■□□□ 1.26
CD40-206ENST00000489304 AFF2P51816 1311 aa22.92■■□□□ 1.26
CD40-206ENST00000489304 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
CD40-206ENST00000489304 TOGARAM1Q9Y4F4 1720 aa22.92■■□□□ 1.26
CD40-206ENST00000489304 G2E3Q7L622 706 aa22.91■■□□□ 1.26
CD40-206ENST00000489304 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
CD40-206ENST00000489304 EIF2S2P20042 333 aaKnown RBP22.91■■□□□ 1.26
CD40-206ENST00000489304 DDB1Q16531 1140 aa22.91■■□□□ 1.26
CD40-206ENST00000489304 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
CD40-206ENST00000489304 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
CD40-206ENST00000489304 GIGYF1O75420 1035 aaPredicted RBP22.9■■□□□ 1.26
CD40-206ENST00000489304 HDGFL1Q5TGJ6 251 aa22.9■■□□□ 1.26
CD40-206ENST00000489304 ZNF496Q96IT1 587 aaPredicted RBP22.89■■□□□ 1.26
CD40-206ENST00000489304 IGHDP01880 384 aa22.88■■□□□ 1.25
CD40-206ENST00000489304 INTS3Q68E01 1043 aaKnown RBP22.88■■□□□ 1.25
CD40-206ENST00000489304 ZBTB7BO15156 539 aaPredicted RBP22.88■■□□□ 1.25
CD40-206ENST00000489304 MARCH10Q8NA82 808 aaPredicted RBP22.88■■□□□ 1.25
CD40-206ENST00000489304 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.87■■□□□ 1.25
CD40-206ENST00000489304 TSHZ2Q9NRE2 1034 aa22.87■■□□□ 1.25
CD40-206ENST00000489304 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
CD40-206ENST00000489304 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
CD40-206ENST00000489304 PIGBQ92521 554 aa22.85■■□□□ 1.25
CD40-206ENST00000489304 RWDD1Q9H446 243 aaPredicted RBP22.85■■□□□ 1.25
CD40-206ENST00000489304 TMOD3Q9NYL9 352 aa22.85■■□□□ 1.25
CD40-206ENST00000489304 ANXA1P04083 346 aa22.84■■□□□ 1.25
CD40-206ENST00000489304 FLIIQ13045 1269 aa22.84■■□□□ 1.25
CD40-206ENST00000489304 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
CD40-206ENST00000489304 C5P01031 1676 aa22.84■■□□□ 1.25
CD40-206ENST00000489304 GLI3P10071 1580 aa22.83■■□□□ 1.24
CD40-206ENST00000489304 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
CD40-206ENST00000489304 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
CD40-206ENST00000489304 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
CD40-206ENST00000489304 ATRNO75882 1429 aa22.82■■□□□ 1.24
CD40-206ENST00000489304 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms