RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CHIC2Q9UKJ5 165 aa8.17□□□□□ -1.1
XRN1-213ENST00000489241 GPR25O00155 361 aa8.16□□□□□ -1.1
XRN1-213ENST00000489241 SOX11P35716 441 aa8.16□□□□□ -1.1
XRN1-213ENST00000489241 TSGA10IPQ3SY00 556 aa8.16□□□□□ -1.1
XRN1-213ENST00000489241 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
XRN1-213ENST00000489241 PROSER2Q86WR7 435 aaPredicted RBP8.16□□□□□ -1.1
XRN1-213ENST00000489241 GTPBP3Q969Y2 492 aaKnown RBP8.16□□□□□ -1.1
XRN1-213ENST00000489241 TRERF1Q96PN7 1200 aa8.16□□□□□ -1.1
XRN1-213ENST00000489241 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
XRN1-213ENST00000489241 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
XRN1-213ENST00000489241 F11P03951 625 aa8.15□□□□□ -1.1
XRN1-213ENST00000489241 GTF2E1P29083 439 aaPredicted RBP8.15□□□□□ -1.1
XRN1-213ENST00000489241 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
XRN1-213ENST00000489241 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
XRN1-213ENST00000489241 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
XRN1-213ENST00000489241 MAP3K10Q02779 954 aa8.14□□□□□ -1.11
XRN1-213ENST00000489241 SEMA3FQ13275 785 aa8.14□□□□□ -1.11
XRN1-213ENST00000489241 MAP7D1Q3KQU3 841 aa8.14□□□□□ -1.11
XRN1-213ENST00000489241 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
XRN1-213ENST00000489241 GSK3AP49840 483 aa8.13□□□□□ -1.11
XRN1-213ENST00000489241 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
XRN1-213ENST00000489241 LYPD4Q6UWN0 246 aa8.13□□□□□ -1.11
XRN1-213ENST00000489241 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
XRN1-213ENST00000489241 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
XRN1-213ENST00000489241 IGF1RP08069 1367 aa8.12□□□□□ -1.11
XRN1-213ENST00000489241 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
XRN1-213ENST00000489241 PHKA2P46019 1235 aa8.12□□□□□ -1.11
XRN1-213ENST00000489241 TLR1Q15399 786 aa8.12□□□□□ -1.11
XRN1-213ENST00000489241 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
XRN1-213ENST00000489241 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
XRN1-213ENST00000489241 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
XRN1-213ENST00000489241 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
XRN1-213ENST00000489241 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
XRN1-213ENST00000489241 THBS1P07996 1170 aa8.1□□□□□ -1.11
XRN1-213ENST00000489241 MX2P20592 715 aa8.1□□□□□ -1.11
XRN1-213ENST00000489241 SCNN1DP51172 638 aa8.1□□□□□ -1.11
XRN1-213ENST00000489241 MARSP56192 900 aaKnown RBP8.1□□□□□ -1.11
XRN1-213ENST00000489241 LBRQ14739 615 aaKnown RBP8.1□□□□□ -1.11
XRN1-213ENST00000489241 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
XRN1-213ENST00000489241 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
XRN1-213ENST00000489241 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
XRN1-213ENST00000489241 INHAP05111 366 aa8.09□□□□□ -1.11
XRN1-213ENST00000489241 GDF10P55107 478 aa8.09□□□□□ -1.11
XRN1-213ENST00000489241 RASSF7Q02833 373 aa8.09□□□□□ -1.11
XRN1-213ENST00000489241 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
XRN1-213ENST00000489241 ARID3CA6NKF2 412 aa8.08□□□□□ -1.12
XRN1-213ENST00000489241 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
XRN1-213ENST00000489241 PGBD3Q8N328 593 aa8.08□□□□□ -1.12
XRN1-213ENST00000489241 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
XRN1-213ENST00000489241 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
XRN1-213ENST00000489241 PHF24Q9UPV7 400 aa8.08□□□□□ -1.12
XRN1-213ENST00000489241 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 GDF11O95390 407 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 BCRP11274 1271 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 MSX1P28360 303 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 MAP2K3P46734 347 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 ARID3AQ99856 593 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 RUBCNLQ9H714 662 aa8.07□□□□□ -1.12
XRN1-213ENST00000489241 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
XRN1-213ENST00000489241 UBAP2LQ14157 1087 aaKnown RBP8.06□□□□□ -1.12
XRN1-213ENST00000489241 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
XRN1-213ENST00000489241 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
XRN1-213ENST00000489241 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
XRN1-213ENST00000489241 ACDQ96AP0 544 aa8.06□□□□□ -1.12
XRN1-213ENST00000489241 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
XRN1-213ENST00000489241 IRS1P35568 1242 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 SMTNP53814 917 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 EML3Q32P44 896 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 CRISPLD1Q9H336 500 aa8.05□□□□□ -1.12
XRN1-213ENST00000489241 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
XRN1-213ENST00000489241 SKIP12755 728 aa8.04□□□□□ -1.12
XRN1-213ENST00000489241 C1orf216Q8TAB5 229 aa8.04□□□□□ -1.12
XRN1-213ENST00000489241 OXCT2Q9BYC2 517 aaPredicted RBP8.04□□□□□ -1.12
XRN1-213ENST00000489241 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
XRN1-213ENST00000489241 ALG2Q9H553 416 aa8.04□□□□□ -1.12
XRN1-213ENST00000489241 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
XRN1-213ENST00000489241 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
XRN1-213ENST00000489241 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
XRN1-213ENST00000489241 DNMT3AQ9Y6K1 912 aaPredicted RBP8.03□□□□□ -1.12
XRN1-213ENST00000489241 ATP4AP20648 1035 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 MTFR1Q15390 333 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 NEDD1Q8NHV4 660 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 SERTAD1Q9UHV2 236 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 NOD1Q9Y239 953 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 PCDHGA11Q9Y5H2 935 aa8.02□□□□□ -1.13
XRN1-213ENST00000489241 A6NJY4 79 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 OIP5O43482 229 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 GTF2IP78347 998 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 NCOA4Q13772 614 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 NBPF1Q3BBV0 1214 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 HDGFL1Q5TGJ6 251 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 FIGNL1Q6PIW4 674 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
XRN1-213ENST00000489241 CALR3Q96L12 384 aaKnown RBP8.01□□□□□ -1.13
XRN1-213ENST00000489241 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms