RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ITPK1Q13572 414 aa18.96■□□□□ 0.63
VTI1A-206ENST00000489142 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
VTI1A-206ENST00000489142 ERVV-2B6SEH9 535 aa18.95■□□□□ 0.62
VTI1A-206ENST00000489142 PHF14O94880 888 aa18.95■□□□□ 0.62
VTI1A-206ENST00000489142 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
VTI1A-206ENST00000489142 AK7Q96M32 723 aa18.95■□□□□ 0.62
VTI1A-206ENST00000489142 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
VTI1A-206ENST00000489142 CABP4P57796 275 aa18.94■□□□□ 0.62
VTI1A-206ENST00000489142 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
VTI1A-206ENST00000489142 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
VTI1A-206ENST00000489142 POLD1P28340 1107 aa18.93■□□□□ 0.62
VTI1A-206ENST00000489142 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
VTI1A-206ENST00000489142 COL5A3P25940 1745 aaPredicted RBP18.92■□□□□ 0.62
VTI1A-206ENST00000489142 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
VTI1A-206ENST00000489142 NFATC2IPQ8NCF5 419 aa18.91■□□□□ 0.62
VTI1A-206ENST00000489142 MTHFSDQ2M296 383 aaKnown RBP18.9■□□□□ 0.62
VTI1A-206ENST00000489142 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
VTI1A-206ENST00000489142 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
VTI1A-206ENST00000489142 ZNF831Q5JPB2 1677 aa18.89■□□□□ 0.61
VTI1A-206ENST00000489142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.89■□□□□ 0.61
VTI1A-206ENST00000489142 GNPATO15228 680 aa18.89■□□□□ 0.61
VTI1A-206ENST00000489142 TJP1Q07157 1748 aa18.88■□□□□ 0.61
VTI1A-206ENST00000489142 DCAF8L1A6NGE4 600 aa18.88■□□□□ 0.61
VTI1A-206ENST00000489142 PTCD1O75127 700 aaKnown RBP18.88■□□□□ 0.61
VTI1A-206ENST00000489142 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
VTI1A-206ENST00000489142 MYH14Q7Z406 1995 aaKnown RBP18.87■□□□□ 0.61
VTI1A-206ENST00000489142 ADAMTS7Q9UKP4 1686 aa18.86■□□□□ 0.61
VTI1A-206ENST00000489142 MAP3K5Q99683 1374 aa18.86■□□□□ 0.61
VTI1A-206ENST00000489142 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
VTI1A-206ENST00000489142 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
VTI1A-206ENST00000489142 MRC1P22897 1456 aa18.85■□□□□ 0.61
VTI1A-206ENST00000489142 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
VTI1A-206ENST00000489142 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
VTI1A-206ENST00000489142 CFAP53Q96M91 514 aa18.85■□□□□ 0.61
VTI1A-206ENST00000489142 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
VTI1A-206ENST00000489142 SSFA2P28290 1259 aa18.84■□□□□ 0.61
VTI1A-206ENST00000489142 SLC52A2Q9HAB3 445 aa18.84■□□□□ 0.61
VTI1A-206ENST00000489142 SLC39A6Q13433 755 aa18.83■□□□□ 0.6
VTI1A-206ENST00000489142 UTRNP46939 3433 aa18.82■□□□□ 0.6
VTI1A-206ENST00000489142 YY1P25490 414 aa18.82■□□□□ 0.6
VTI1A-206ENST00000489142 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
VTI1A-206ENST00000489142 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
VTI1A-206ENST00000489142 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
VTI1A-206ENST00000489142 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
VTI1A-206ENST00000489142 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
VTI1A-206ENST00000489142 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
VTI1A-206ENST00000489142 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
VTI1A-206ENST00000489142 RTCBQ9Y3I0 505 aaKnown RBP18.8■□□□□ 0.6
VTI1A-206ENST00000489142 SIPA1L3O60292 1781 aaPredicted RBP18.8■□□□□ 0.6
VTI1A-206ENST00000489142 UBR2Q8IWV8 1755 aa18.79■□□□□ 0.6
VTI1A-206ENST00000489142 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
VTI1A-206ENST00000489142 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
VTI1A-206ENST00000489142 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
VTI1A-206ENST00000489142 GPR162Q16538 588 aa18.79■□□□□ 0.6
VTI1A-206ENST00000489142 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
VTI1A-206ENST00000489142 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
VTI1A-206ENST00000489142 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
VTI1A-206ENST00000489142 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
VTI1A-206ENST00000489142 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
VTI1A-206ENST00000489142 CHD4Q14839 1912 aa18.78■□□□□ 0.6
VTI1A-206ENST00000489142 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
VTI1A-206ENST00000489142 RC3H1Q5TC82 1133 aaKnown RBP18.77■□□□□ 0.6
VTI1A-206ENST00000489142 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
VTI1A-206ENST00000489142 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
VTI1A-206ENST00000489142 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
VTI1A-206ENST00000489142 WWC3Q9ULE0 1092 aa18.75■□□□□ 0.59
VTI1A-206ENST00000489142 MMP10P09238 476 aa18.74■□□□□ 0.59
VTI1A-206ENST00000489142 RFC4P35249 363 aa18.74■□□□□ 0.59
VTI1A-206ENST00000489142 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
VTI1A-206ENST00000489142 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
VTI1A-206ENST00000489142 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
VTI1A-206ENST00000489142 ADRA2BP18089 450 aa18.73■□□□□ 0.59
VTI1A-206ENST00000489142 TEFQ10587 303 aa18.73■□□□□ 0.59
VTI1A-206ENST00000489142 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
VTI1A-206ENST00000489142 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
VTI1A-206ENST00000489142 GYS1P13807 737 aa18.72■□□□□ 0.59
VTI1A-206ENST00000489142 TTC5Q8N0Z6 440 aa18.72■□□□□ 0.59
VTI1A-206ENST00000489142 CCDC87Q9NVE4 849 aa18.72■□□□□ 0.59
VTI1A-206ENST00000489142 CD2APQ9Y5K6 639 aa18.72■□□□□ 0.59
VTI1A-206ENST00000489142 N4BP2Q86UW6 1770 aaPredicted RBP18.71■□□□□ 0.59
VTI1A-206ENST00000489142 CYP19A1P11511 503 aaPredicted RBP18.71■□□□□ 0.59
VTI1A-206ENST00000489142 CEMIPQ8WUJ3 1361 aa18.7■□□□□ 0.58
VTI1A-206ENST00000489142 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
VTI1A-206ENST00000489142 FCHSD2O94868 740 aa18.7■□□□□ 0.58
VTI1A-206ENST00000489142 MCM10Q7L590 875 aa18.7■□□□□ 0.58
VTI1A-206ENST00000489142 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
VTI1A-206ENST00000489142 KCNQ3O43525 872 aa18.69■□□□□ 0.58
VTI1A-206ENST00000489142 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
VTI1A-206ENST00000489142 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
VTI1A-206ENST00000489142 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
VTI1A-206ENST00000489142 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
VTI1A-206ENST00000489142 FKBP8Q14318 412 aa18.68■□□□□ 0.58
VTI1A-206ENST00000489142 ZNF790Q6PG37 636 aa18.68■□□□□ 0.58
VTI1A-206ENST00000489142 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
VTI1A-206ENST00000489142 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
VTI1A-206ENST00000489142 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
VTI1A-206ENST00000489142 COL15A1P39059 1388 aa18.67■□□□□ 0.58
VTI1A-206ENST00000489142 BTBD11A6QL63 1104 aa18.66■□□□□ 0.58
VTI1A-206ENST00000489142 VSIG10Q8N0Z9 540 aa18.66■□□□□ 0.58
VTI1A-206ENST00000489142 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms