RNA–Protein interactions for RNA: ENST00000489041.1

MTHFD2-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-208ENST00000489041 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 CYP27B1O15528 508 aa11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 YBX3P16989 372 aaKnown RBP eCLIP11.4□□□□□ -0.583e-9■■■□□ 14.9
MTHFD2-208ENST00000489041 MSL1Q68DK7 614 aa11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.58
MTHFD2-208ENST00000489041 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
MTHFD2-208ENST00000489041 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
MTHFD2-208ENST00000489041 FLT4P35916 1363 aa11.39□□□□□ -0.59
MTHFD2-208ENST00000489041 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
MTHFD2-208ENST00000489041 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
MTHFD2-208ENST00000489041 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
MTHFD2-208ENST00000489041 PALLDQ8WX93 1383 aa11.38□□□□□ -0.59
MTHFD2-208ENST00000489041 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
MTHFD2-208ENST00000489041 PIGBQ92521 554 aa11.37□□□□□ -0.59
MTHFD2-208ENST00000489041 AK7Q96M32 723 aa11.37□□□□□ -0.59
MTHFD2-208ENST00000489041 SPG7Q9UQ90 795 aa11.37□□□□□ -0.59
MTHFD2-208ENST00000489041 LY75O60449 1722 aa11.37□□□□□ -0.59
MTHFD2-208ENST00000489041 DOT1LQ8TEK3 1739 aa11.37□□□□□ -0.59
MTHFD2-208ENST00000489041 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
MTHFD2-208ENST00000489041 NUBP1P53384 320 aa11.36□□□□□ -0.59
MTHFD2-208ENST00000489041 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
MTHFD2-208ENST00000489041 CLCN6P51797 869 aa11.35□□□□□ -0.59
MTHFD2-208ENST00000489041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■■□□□ 12.4
MTHFD2-208ENST00000489041 RGPD2P0DJD1 1756 aa11.35□□□□□ -0.59
MTHFD2-208ENST00000489041 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
MTHFD2-208ENST00000489041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 PHF14O94880 888 aa11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 SIK1P57059 783 aa11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
MTHFD2-208ENST00000489041 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 SSFA2P28290 1259 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 EYA1Q99502 592 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
MTHFD2-208ENST00000489041 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
MTHFD2-208ENST00000489041 ASAP1Q9ULH1 1129 aa11.32□□□□□ -0.6
MTHFD2-208ENST00000489041 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
MTHFD2-208ENST00000489041 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
MTHFD2-208ENST00000489041 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
MTHFD2-208ENST00000489041 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
MTHFD2-208ENST00000489041 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
MTHFD2-208ENST00000489041 ATP10DQ9P241 1426 aa11.31□□□□□ -0.6
MTHFD2-208ENST00000489041 GNPATO15228 680 aa11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 PHKG2P15735 406 aa11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 C5P01031 1676 aa11.3□□□□□ -0.6
MTHFD2-208ENST00000489041 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
MTHFD2-208ENST00000489041 ITPK1Q13572 414 aa11.29□□□□□ -0.6
MTHFD2-208ENST00000489041 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
MTHFD2-208ENST00000489041 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
MTHFD2-208ENST00000489041 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 C4BP0C0L5 1744 aa11.28□□□□□ -0.6
MTHFD2-208ENST00000489041 MMP10P09238 476 aa11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 HSPA6P17066 643 aa11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 TGFB2P61812 414 aa11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 EIF4A2Q14240 407 aaKnown RBP11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 RTCBQ9Y3I0 505 aaKnown RBP11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 ADCY9O60503 1353 aa11.27□□□□□ -0.61
MTHFD2-208ENST00000489041 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 PLEKHO1Q53GL0 409 aaPredicted RBP11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 DCAF5Q96JK2 942 aa11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 POLR3GLQ9BT43 218 aa11.26□□□□□ -0.61
MTHFD2-208ENST00000489041 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
MTHFD2-208ENST00000489041 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
MTHFD2-208ENST00000489041 ITGB4P16144 1822 aa11.25□□□□□ -0.61
MTHFD2-208ENST00000489041 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 TOGARAM1Q9Y4F4 1720 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 MAP3K13O43283 966 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 RFC4P35249 363 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
MTHFD2-208ENST00000489041 KIF3CO14782 793 aa11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 CABP4P57796 275 aa11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
MTHFD2-208ENST00000489041 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
MTHFD2-208ENST00000489041 GYS1P13807 737 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms