RNA–Protein interactions for RNA: ENST00000489029.1

FAM53A-206, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-206ENST00000489029 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
FAM53A-206ENST00000489029 POLD1P28340 1107 aa23.18■■□□□ 1.3
FAM53A-206ENST00000489029 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
FAM53A-206ENST00000489029 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
FAM53A-206ENST00000489029 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
FAM53A-206ENST00000489029 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
FAM53A-206ENST00000489029 DCAF8L1A6NGE4 600 aa23.16■■□□□ 1.3
FAM53A-206ENST00000489029 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
FAM53A-206ENST00000489029 MRC1P22897 1456 aa23.16■■□□□ 1.3
FAM53A-206ENST00000489029 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
FAM53A-206ENST00000489029 ATP6V1AP38606 617 aa23.15■■□□□ 1.3
FAM53A-206ENST00000489029 GAS2L2Q8NHY3 880 aa23.15■■□□□ 1.3
FAM53A-206ENST00000489029 ARXQ96QS3 562 aa23.15■■□□□ 1.3
FAM53A-206ENST00000489029 SSFA2P28290 1259 aa23.14■■□□□ 1.29
FAM53A-206ENST00000489029 CICQ96RK0 1608 aaPredicted RBP23.13■■□□□ 1.29
FAM53A-206ENST00000489029 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
FAM53A-206ENST00000489029 MSH5O43196 834 aa23.12■■□□□ 1.29
FAM53A-206ENST00000489029 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
FAM53A-206ENST00000489029 COL5A3P25940 1745 aaPredicted RBP23.11■■□□□ 1.29
FAM53A-206ENST00000489029 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
FAM53A-206ENST00000489029 LINC00116Q8NCU8 138 aa23.11■■□□□ 1.29
FAM53A-206ENST00000489029 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
FAM53A-206ENST00000489029 RNMTO43148 476 aaKnown RBP23.1■■□□□ 1.29
FAM53A-206ENST00000489029 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
FAM53A-206ENST00000489029 ITPK1Q13572 414 aa23.09■■□□□ 1.29
FAM53A-206ENST00000489029 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
FAM53A-206ENST00000489029 FHDC1Q9C0D6 1143 aaPredicted RBP23.09■■□□□ 1.29
FAM53A-206ENST00000489029 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.29
FAM53A-206ENST00000489029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
FAM53A-206ENST00000489029 SYT17Q9BSW7 474 aa23.08■■□□□ 1.29
FAM53A-206ENST00000489029 FCHSD2O94868 740 aa23.07■■□□□ 1.28
FAM53A-206ENST00000489029 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
FAM53A-206ENST00000489029 GNPATO15228 680 aa23.06■■□□□ 1.28
FAM53A-206ENST00000489029 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
FAM53A-206ENST00000489029 ADRA2BP18089 450 aa23.06■■□□□ 1.28
FAM53A-206ENST00000489029 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
FAM53A-206ENST00000489029 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
FAM53A-206ENST00000489029 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
FAM53A-206ENST00000489029 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
FAM53A-206ENST00000489029 RALBP1Q15311 655 aa23.05■■□□□ 1.28
FAM53A-206ENST00000489029 LGR6Q9HBX8 967 aa23.05■■□□□ 1.28
FAM53A-206ENST00000489029 RTCBQ9Y3I0 505 aaKnown RBP23.05■■□□□ 1.28
FAM53A-206ENST00000489029 SLC4A9Q96Q91 983 aa23.04■■□□□ 1.28
FAM53A-206ENST00000489029 PTCD1O75127 700 aaKnown RBP23.03■■□□□ 1.28
FAM53A-206ENST00000489029 PHF14O94880 888 aa23.03■■□□□ 1.28
FAM53A-206ENST00000489029 TJP1Q07157 1748 aa23.02■■□□□ 1.28
FAM53A-206ENST00000489029 TEFQ10587 303 aa23.02■■□□□ 1.28
FAM53A-206ENST00000489029 RPS6KA4O75676 772 aa23.01■■□□□ 1.27
FAM53A-206ENST00000489029 NEFMP07197 916 aa23.01■■□□□ 1.27
FAM53A-206ENST00000489029 MYH14Q7Z406 1995 aaKnown RBP23.01■■□□□ 1.27
FAM53A-206ENST00000489029 UBR2Q8IWV8 1755 aa23.01■■□□□ 1.27
FAM53A-206ENST00000489029 SIPA1L3O60292 1781 aaPredicted RBP23■■□□□ 1.27
FAM53A-206ENST00000489029 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
FAM53A-206ENST00000489029 VSIG10Q8N0Z9 540 aa23■■□□□ 1.27
FAM53A-206ENST00000489029 CEMIPQ8WUJ3 1361 aa23■■□□□ 1.27
FAM53A-206ENST00000489029 AMIGO3Q86WK7 504 aa22.99■■□□□ 1.27
FAM53A-206ENST00000489029 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
FAM53A-206ENST00000489029 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
FAM53A-206ENST00000489029 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
FAM53A-206ENST00000489029 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
FAM53A-206ENST00000489029 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
FAM53A-206ENST00000489029 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
FAM53A-206ENST00000489029 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
FAM53A-206ENST00000489029 IL17REQ8NFR9 667 aa22.97■■□□□ 1.27
FAM53A-206ENST00000489029 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
FAM53A-206ENST00000489029 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
FAM53A-206ENST00000489029 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
FAM53A-206ENST00000489029 CD2APQ9Y5K6 639 aa22.96■■□□□ 1.27
FAM53A-206ENST00000489029 C4AP0C0L4 1744 aa22.95■■□□□ 1.26
FAM53A-206ENST00000489029 RFC4P35249 363 aa22.95■■□□□ 1.26
FAM53A-206ENST00000489029 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
FAM53A-206ENST00000489029 SLC39A6Q13433 755 aa22.94■■□□□ 1.26
FAM53A-206ENST00000489029 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
FAM53A-206ENST00000489029 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
FAM53A-206ENST00000489029 ARHGEF1Q92888 912 aaKnown RBP22.93■■□□□ 1.26
FAM53A-206ENST00000489029 TEX13AQ9BXU3 409 aaPredicted RBP22.93■■□□□ 1.26
FAM53A-206ENST00000489029 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
FAM53A-206ENST00000489029 DNAJC10Q8IXB1 793 aa22.92■■□□□ 1.26
FAM53A-206ENST00000489029 CHD4Q14839 1912 aa22.91■■□□□ 1.26
FAM53A-206ENST00000489029 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
FAM53A-206ENST00000489029 STARD3NLO95772 234 aa22.9■■□□□ 1.26
FAM53A-206ENST00000489029 SMIM5Q71RC9 77 aa22.9■■□□□ 1.26
FAM53A-206ENST00000489029 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
FAM53A-206ENST00000489029 INTS5Q6P9B9 1019 aaKnown RBP22.89■■□□□ 1.25
FAM53A-206ENST00000489029 FMNL2Q96PY5 1086 aa22.89■■□□□ 1.25
FAM53A-206ENST00000489029 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
FAM53A-206ENST00000489029 MAPK8IP3Q9UPT6 1336 aa22.88■■□□□ 1.25
FAM53A-206ENST00000489029 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
FAM53A-206ENST00000489029 GYS1P13807 737 aa22.88■■□□□ 1.25
FAM53A-206ENST00000489029 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
FAM53A-206ENST00000489029 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
FAM53A-206ENST00000489029 MMP10P09238 476 aa22.87■■□□□ 1.25
FAM53A-206ENST00000489029 YY1P25490 414 aa22.87■■□□□ 1.25
FAM53A-206ENST00000489029 GPR162Q16538 588 aa22.87■■□□□ 1.25
FAM53A-206ENST00000489029 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
FAM53A-206ENST00000489029 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
FAM53A-206ENST00000489029 ZNF496Q96IT1 587 aaPredicted RBP22.86■■□□□ 1.25
FAM53A-206ENST00000489029 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
FAM53A-206ENST00000489029 COL15A1P39059 1388 aa22.85■■□□□ 1.25
FAM53A-206ENST00000489029 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms