RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 GDF10P55107 478 aa9.89□□□□□ -0.83
CTNNB1-215ENST00000488914 MAP7D1Q3KQU3 841 aa9.89□□□□□ -0.83
CTNNB1-215ENST00000488914 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
CTNNB1-215ENST00000488914 INHAP05111 366 aa9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 GSK3AP49840 483 aa9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 SRSF11Q05519 484 aaKnown RBP9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 TLR1Q15399 786 aa9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 ADAMTS19Q8TE59 1207 aa9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 NUCKS1Q9H1E3 243 aaKnown RBP9.88□□□□□ -0.83
CTNNB1-215ENST00000488914 H7C1W4 665 aa9.87□□□□□ -0.83
CTNNB1-215ENST00000488914 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
CTNNB1-215ENST00000488914 SERTAD1Q9UHV2 236 aa9.87□□□□□ -0.83
CTNNB1-215ENST00000488914 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 SKIP12755 728 aa9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
CTNNB1-215ENST00000488914 MSX1P28360 303 aa9.85□□□□□ -0.83
CTNNB1-215ENST00000488914 UBAP2LQ14157 1087 aaKnown RBP9.85□□□□□ -0.83
CTNNB1-215ENST00000488914 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
CTNNB1-215ENST00000488914 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
CTNNB1-215ENST00000488914 IGF1RP08069 1367 aa9.85□□□□□ -0.83
CTNNB1-215ENST00000488914 A0A1B0GTH6 734 aa9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 FLIIQ13045 1269 aa9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 DEPDC4Q8N2C3 294 aa9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 RHBDD1Q8TEB9 315 aa9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 USP3Q9Y6I4 520 aa9.84□□□□□ -0.83
CTNNB1-215ENST00000488914 RAD21O60216 631 aa9.83□□□□□ -0.84
CTNNB1-215ENST00000488914 GTF2E1P29083 439 aaPredicted RBP9.83□□□□□ -0.84
CTNNB1-215ENST00000488914 SMTNP53814 917 aa9.83□□□□□ -0.84
CTNNB1-215ENST00000488914 PLA2G4AP47712 749 aa9.82□□□□□ -0.84
CTNNB1-215ENST00000488914 KCNMA1Q12791 1236 aa9.82□□□□□ -0.84
CTNNB1-215ENST00000488914 NCOA4Q13772 614 aa9.82□□□□□ -0.84
CTNNB1-215ENST00000488914 CLUAP1Q96AJ1 413 aa9.82□□□□□ -0.84
CTNNB1-215ENST00000488914 TRERF1Q96PN7 1200 aa9.82□□□□□ -0.84
CTNNB1-215ENST00000488914 EML3Q32P44 896 aa9.81□□□□□ -0.84
CTNNB1-215ENST00000488914 ZNF295-AS1Q8N0V1 137 aa9.81□□□□□ -0.84
CTNNB1-215ENST00000488914 ACDQ96AP0 544 aa9.81□□□□□ -0.84
CTNNB1-215ENST00000488914 MX2P20592 715 aa9.8□□□□□ -0.84
CTNNB1-215ENST00000488914 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
CTNNB1-215ENST00000488914 WWC1Q8IX03 1113 aa9.8□□□□□ -0.84
CTNNB1-215ENST00000488914 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
CTNNB1-215ENST00000488914 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
CTNNB1-215ENST00000488914 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
CTNNB1-215ENST00000488914 GTF2IP78347 998 aa9.79□□□□□ -0.84
CTNNB1-215ENST00000488914 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
CTNNB1-215ENST00000488914 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
CTNNB1-215ENST00000488914 IQSEC3Q9UPP2 1182 aaPredicted RBP9.79□□□□□ -0.84
CTNNB1-215ENST00000488914 A6NJY4 79 aa9.78□□□□□ -0.84
CTNNB1-215ENST00000488914 ATP4AP20648 1035 aa9.78□□□□□ -0.84
CTNNB1-215ENST00000488914 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
CTNNB1-215ENST00000488914 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTNNB1-215ENST00000488914 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
CTNNB1-215ENST00000488914 RASSF7Q02833 373 aa9.77□□□□□ -0.85
CTNNB1-215ENST00000488914 MTFR1Q15390 333 aa9.77□□□□□ -0.85
CTNNB1-215ENST00000488914 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
CTNNB1-215ENST00000488914 CFHR5Q9BXR6 569 aa9.77□□□□□ -0.85
CTNNB1-215ENST00000488914 CSB-PGBD3P0DP91 1061 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 NIFKQ9BYG3 293 aaKnown RBP9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 ZNF358Q9NW07 568 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
CTNNB1-215ENST00000488914 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 C2CD2LO14523 706 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 BNIP3LO60238 219 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 BCRP11274 1271 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 IRS1P35568 1242 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 PSME1Q06323 249 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 CRISPLD1Q9H336 500 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 NDFIP2Q9NV92 336 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 HCN2Q9UL51 889 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
CTNNB1-215ENST00000488914 ZBTB7BO15156 539 aaPredicted RBP9.74□□□□□ -0.85
CTNNB1-215ENST00000488914 EFHC2Q5JST6 749 aa9.74□□□□□ -0.85
CTNNB1-215ENST00000488914 C1orf229Q6ZS94 237 aaPredicted RBP9.74□□□□□ -0.85
CTNNB1-215ENST00000488914 USP17L3A6NCW0 530 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 USP17L4A6NCW7 530 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 GDF11O95390 407 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 CTBSQ01459 385 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 LBRQ14739 615 aaKnown RBP9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 TBCELQ5QJ74 424 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 USP17L2Q6R6M4 530 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 USP17L1Q7RTZ2 530 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 ZDHHC1Q8WTX9 485 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 KLRG1Q96E93 195 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 ZCCHC2Q9C0B9 1178 aaKnown RBP9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
CTNNB1-215ENST00000488914 CLDN10P78369 228 aa9.72□□□□□ -0.85
CTNNB1-215ENST00000488914 TNS4Q8IZW8 715 aa9.72□□□□□ -0.85
CTNNB1-215ENST00000488914 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms