RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 DCAF5Q96JK2 942 aa24.94■■□□□ 1.58
ATG9A-222ENST00000488833 KDM6AO15550 1401 aaPredicted RBP24.94■■□□□ 1.58
ATG9A-222ENST00000488833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.93■■□□□ 1.58
ATG9A-222ENST00000488833 ERVV-2B6SEH9 535 aa24.93■■□□□ 1.58
ATG9A-222ENST00000488833 ITPK1Q13572 414 aa24.93■■□□□ 1.58
ATG9A-222ENST00000488833 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
ATG9A-222ENST00000488833 SSFA2P28290 1259 aa24.92■■□□□ 1.58
ATG9A-222ENST00000488833 SULT6B1Q6IMI4 303 aa24.92■■□□□ 1.58
ATG9A-222ENST00000488833 KDRP35968 1356 aa24.92■■□□□ 1.58
ATG9A-222ENST00000488833 GNPATO15228 680 aa24.91■■□□□ 1.58
ATG9A-222ENST00000488833 IL13P35225 146 aa24.9■■□□□ 1.58
ATG9A-222ENST00000488833 C1orf141Q5JVX7 400 aa24.9■■□□□ 1.58
ATG9A-222ENST00000488833 ZNF784Q8NCA9 323 aaPredicted RBP24.9■■□□□ 1.58
ATG9A-222ENST00000488833 RBM42Q9BTD8 480 aaKnown RBP24.89■■□□□ 1.58
ATG9A-222ENST00000488833 CABP4P57796 275 aa24.88■■□□□ 1.57
ATG9A-222ENST00000488833 ZNF831Q5JPB2 1677 aa24.88■■□□□ 1.57
ATG9A-222ENST00000488833 MTHFSP49914 203 aa24.87■■□□□ 1.57
ATG9A-222ENST00000488833 CD2APQ9Y5K6 639 aa24.86■■□□□ 1.57
ATG9A-222ENST00000488833 COL5A3P25940 1745 aaPredicted RBP24.86■■□□□ 1.57
ATG9A-222ENST00000488833 CC2D1BQ5T0F9 858 aaKnown RBP24.85■■□□□ 1.57
ATG9A-222ENST00000488833 SLC4A9Q96Q91 983 aa24.85■■□□□ 1.57
ATG9A-222ENST00000488833 GOLGB1Q14789 3259 aaKnown RBP24.84■■□□□ 1.57
ATG9A-222ENST00000488833 PER1O15534 1290 aaPredicted RBP24.84■■□□□ 1.57
ATG9A-222ENST00000488833 YBX3P16989 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
ATG9A-222ENST00000488833 SCN11AQ9UI33 1791 aa24.83■■□□□ 1.57
ATG9A-222ENST00000488833 GRIN3BO60391 1043 aa24.81■■□□□ 1.56
ATG9A-222ENST00000488833 RTCBQ9Y3I0 505 aaKnown RBP24.81■■□□□ 1.56
ATG9A-222ENST00000488833 HMOX1P09601 288 aa24.8■■□□□ 1.56
ATG9A-222ENST00000488833 CNTNAP4Q9C0A0 1308 aa24.8■■□□□ 1.56
ATG9A-222ENST00000488833 PTCD1O75127 700 aaKnown RBP24.79■■□□□ 1.56
ATG9A-222ENST00000488833 CNGB1Q14028 1251 aaPredicted RBP24.79■■□□□ 1.56
ATG9A-222ENST00000488833 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
ATG9A-222ENST00000488833 AKAP4Q5JQC9 854 aa24.78■■□□□ 1.56
ATG9A-222ENST00000488833 TRAPPC3LQ5T215 181 aa24.78■■□□□ 1.56
ATG9A-222ENST00000488833 RC3H1Q5TC82 1133 aaKnown RBP24.78■■□□□ 1.56
ATG9A-222ENST00000488833 MYH14Q7Z406 1995 aaKnown RBP24.77■■□□□ 1.56
ATG9A-222ENST00000488833 DIAPH1O60610 1272 aaKnown RBP24.77■■□□□ 1.56
ATG9A-222ENST00000488833 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
ATG9A-222ENST00000488833 TJP1Q07157 1748 aa24.76■■□□□ 1.55
ATG9A-222ENST00000488833 MMP10P09238 476 aa24.76■■□□□ 1.55
ATG9A-222ENST00000488833 VIRMAQ69YN4 1812 aaKnown RBP24.76■■□□□ 1.55
ATG9A-222ENST00000488833 C4AP0C0L4 1744 aa24.75■■□□□ 1.55
ATG9A-222ENST00000488833 ADRA2BP18089 450 aa24.75■■□□□ 1.55
ATG9A-222ENST00000488833 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
ATG9A-222ENST00000488833 RPS6KA4O75676 772 aa24.74■■□□□ 1.55
ATG9A-222ENST00000488833 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
ATG9A-222ENST00000488833 MRC1P22897 1456 aa24.74■■□□□ 1.55
ATG9A-222ENST00000488833 ARHGEF1Q92888 912 aaKnown RBP24.73■■□□□ 1.55
ATG9A-222ENST00000488833 SLC52A2Q9HAB3 445 aa24.73■■□□□ 1.55
ATG9A-222ENST00000488833 WWC3Q9ULE0 1092 aa24.73■■□□□ 1.55
ATG9A-222ENST00000488833 RFC4P35249 363 aa24.72■■□□□ 1.55
ATG9A-222ENST00000488833 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
ATG9A-222ENST00000488833 LGR6Q9HBX8 967 aa24.72■■□□□ 1.55
ATG9A-222ENST00000488833 RNMTO43148 476 aaKnown RBP24.71■■□□□ 1.55
ATG9A-222ENST00000488833 NLGN1Q8N2Q7 840 aa24.71■■□□□ 1.55
ATG9A-222ENST00000488833 MTHFSDQ2M296 383 aaKnown RBP24.7■■□□□ 1.54
ATG9A-222ENST00000488833 KIF13BQ9NQT8 1826 aa24.7■■□□□ 1.54
ATG9A-222ENST00000488833 ADAMTS7Q9UKP4 1686 aa24.69■■□□□ 1.54
ATG9A-222ENST00000488833 GYS1P13807 737 aa24.69■■□□□ 1.54
ATG9A-222ENST00000488833 U2SURPO15042 1029 aaKnown RBP24.68■■□□□ 1.54
ATG9A-222ENST00000488833 C10orf71Q711Q0 1435 aa24.67■■□□□ 1.54
ATG9A-222ENST00000488833 KIAA1551Q9HCM1 1747 aa24.66■■□□□ 1.54
ATG9A-222ENST00000488833 PXDNLA1KZ92 1463 aa24.66■■□□□ 1.54
ATG9A-222ENST00000488833 SLC39A6Q13433 755 aa24.66■■□□□ 1.54
ATG9A-222ENST00000488833 DNAJC10Q8IXB1 793 aa24.66■■□□□ 1.54
ATG9A-222ENST00000488833 KCPQ6ZWJ8 1503 aa24.66■■□□□ 1.54
ATG9A-222ENST00000488833 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
ATG9A-222ENST00000488833 SRP68Q9UHB9 627 aaKnown RBP24.65■■□□□ 1.54
ATG9A-222ENST00000488833 GIGYF1O75420 1035 aaPredicted RBP24.64■■□□□ 1.54
ATG9A-222ENST00000488833 CCDC87Q9NVE4 849 aa24.64■■□□□ 1.54
ATG9A-222ENST00000488833 PARP3Q9Y6F1 533 aa24.64■■□□□ 1.54
ATG9A-222ENST00000488833 USP42Q9H9J4 1324 aaKnown RBP24.63■■□□□ 1.53
ATG9A-222ENST00000488833 ATP10DQ9P241 1426 aa24.63■■□□□ 1.53
ATG9A-222ENST00000488833 C1QTNF8P60827 252 aa24.63■■□□□ 1.53
ATG9A-222ENST00000488833 INTS5Q6P9B9 1019 aaKnown RBP24.63■■□□□ 1.53
ATG9A-222ENST00000488833 TGFB2P61812 414 aa24.61■■□□□ 1.53
ATG9A-222ENST00000488833 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
ATG9A-222ENST00000488833 UBR2Q8IWV8 1755 aa24.61■■□□□ 1.53
ATG9A-222ENST00000488833 GAS2L2Q8NHY3 880 aa24.6■■□□□ 1.53
ATG9A-222ENST00000488833 ADCY9O60503 1353 aa24.59■■□□□ 1.53
ATG9A-222ENST00000488833 A0A0G2JLW4 131 aa24.59■■□□□ 1.53
ATG9A-222ENST00000488833 CYP19A1P11511 503 aaPredicted RBP24.59■■□□□ 1.53
ATG9A-222ENST00000488833 FKBP8Q14318 412 aa24.59■■□□□ 1.53
ATG9A-222ENST00000488833 SOS1Q07889 1333 aaPredicted RBP24.59■■□□□ 1.53
ATG9A-222ENST00000488833 GNAT3A8MTJ3 354 aa24.57■■□□□ 1.52
ATG9A-222ENST00000488833 TTC5Q8N0Z6 440 aa24.57■■□□□ 1.52
ATG9A-222ENST00000488833 COL15A1P39059 1388 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 ZPR1O75312 459 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 DPEP1P16444 411 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 DDR1Q08345 913 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 TEFQ10587 303 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 BCS1LQ9Y276 419 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 ZBTB1Q9Y2K1 713 aa24.56■■□□□ 1.52
ATG9A-222ENST00000488833 SIPA1L3O60292 1781 aaPredicted RBP24.56■■□□□ 1.52
ATG9A-222ENST00000488833 BRCA1P38398 1863 aaKnown RBP24.55■■□□□ 1.52
ATG9A-222ENST00000488833 SENP3-EIF4A1A0A087X0R7 540 aa24.55■■□□□ 1.52
ATG9A-222ENST00000488833 VSIG10Q8N0Z9 540 aa24.55■■□□□ 1.52
ATG9A-222ENST00000488833 PRKAR2BP31323 418 aa24.54■■□□□ 1.52
ATG9A-222ENST00000488833 USPL1Q5W0Q7 1092 aa24.54■■□□□ 1.52
ATG9A-222ENST00000488833 IL17REQ8NFR9 667 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms