RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 TAS1R3Q7RTX0 852 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 NEDD1Q8NHV4 660 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 CNKSR1Q969H4 720 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
CD46-215ENST00000488596 GNRH1P01148 92 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 F11P03951 625 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 CENPCQ03188 943 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 ALYREFQ86V81 257 aaKnown RBP7.12□□□□□ -1.27
CD46-215ENST00000488596 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 ESYT1Q9BSJ8 1104 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
CD46-215ENST00000488596 HRH3Q9Y5N1 445 aa7.12□□□□□ -1.27
CD46-215ENST00000488596 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
CD46-215ENST00000488596 PHKA2P46019 1235 aa7.11□□□□□ -1.27
CD46-215ENST00000488596 BAG6P46379 1132 aa7.11□□□□□ -1.27
CD46-215ENST00000488596 TRERF1Q96PN7 1200 aa7.11□□□□□ -1.27
CD46-215ENST00000488596 NUCKS1Q9H1E3 243 aaKnown RBP7.11□□□□□ -1.27
CD46-215ENST00000488596 MX2P20592 715 aa7.1□□□□□ -1.27
CD46-215ENST00000488596 GPAMQ9HCL2 828 aa7.1□□□□□ -1.27
CD46-215ENST00000488596 XAGE2Q96GT9 111 aa7.09□□□□□ -1.27
CD46-215ENST00000488596 STAU1O95793 577 aaKnown RBP7.08□□□□□ -1.28
CD46-215ENST00000488596 PHTF2Q8N3S3 785 aa7.08□□□□□ -1.28
CD46-215ENST00000488596 ZSCAN10Q96SZ4 725 aaPredicted RBP7.08□□□□□ -1.28
CD46-215ENST00000488596 FHDC1Q9C0D6 1143 aaPredicted RBP7.08□□□□□ -1.28
CD46-215ENST00000488596 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
CD46-215ENST00000488596 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
CD46-215ENST00000488596 UBAP2LQ14157 1087 aaKnown RBP7.07□□□□□ -1.28
CD46-215ENST00000488596 CFHR5Q9BXR6 569 aa7.07□□□□□ -1.28
CD46-215ENST00000488596 A0A1B0GTH6 734 aa7.06□□□□□ -1.28
CD46-215ENST00000488596 APBB1O00213 710 aa7.06□□□□□ -1.28
CD46-215ENST00000488596 OIP5O43482 229 aa7.06□□□□□ -1.28
CD46-215ENST00000488596 IRF5Q13568 498 aa7.06□□□□□ -1.28
CD46-215ENST00000488596 C4orf17Q53FE4 359 aa7.06□□□□□ -1.28
CD46-215ENST00000488596 C1orf229Q6ZS94 237 aaPredicted RBP7.06□□□□□ -1.28
CD46-215ENST00000488596 SNRPNP63162 240 aaKnown RBP7.05□□□□□ -1.28
CD46-215ENST00000488596 TMEM214Q6NUQ4 689 aaKnown RBP7.05□□□□□ -1.28
CD46-215ENST00000488596 KLRG1Q96E93 195 aa7.05□□□□□ -1.28
CD46-215ENST00000488596 OXCT2Q9BYC2 517 aaPredicted RBP7.05□□□□□ -1.28
CD46-215ENST00000488596 RUBCNLQ9H714 662 aa7.05□□□□□ -1.28
CD46-215ENST00000488596 ETNK1Q9HBU6 452 aa7.05□□□□□ -1.28
CD46-215ENST00000488596 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
CD46-215ENST00000488596 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 MSX1P28360 303 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 MAP2K3P46734 347 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 USP4Q13107 963 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 GNASQ5JWF2 1037 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 DOLKQ9UPQ8 538 aa7.04□□□□□ -1.28
CD46-215ENST00000488596 FURINP09958 794 aa7.03□□□□□ -1.28
CD46-215ENST00000488596 EIF4G2P78344 907 aaKnown RBP eCLIP7.03□□□□□ -1.28
CD46-215ENST00000488596 ESCO1Q5FWF5 840 aa7.03□□□□□ -1.28
CD46-215ENST00000488596 MKL2Q9ULH7 1088 aa7.03□□□□□ -1.28
CD46-215ENST00000488596 C2CD2LO14523 706 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 VAC14Q08AM6 782 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 SLFNL1Q499Z3 407 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 PPARGC1BQ86YN6 1023 aaKnown RBP7.02□□□□□ -1.29
CD46-215ENST00000488596 RNF135Q8IUD6 432 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 CHIC2Q9UKJ5 165 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 PHF24Q9UPV7 400 aa7.02□□□□□ -1.29
CD46-215ENST00000488596 BNIP3LO60238 219 aa7.01□□□□□ -1.29
CD46-215ENST00000488596 GTF2E1P29083 439 aaPredicted RBP7.01□□□□□ -1.29
CD46-215ENST00000488596 LBRQ14739 615 aaKnown RBP7.01□□□□□ -1.29
CD46-215ENST00000488596 RHBDD1Q8TEB9 315 aa7.01□□□□□ -1.29
CD46-215ENST00000488596 ABHD17AQ96GS6 310 aa7.01□□□□□ -1.29
CD46-215ENST00000488596 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
CD46-215ENST00000488596 SCNN1DP51172 638 aa7□□□□□ -1.29
CD46-215ENST00000488596 CTBSQ01459 385 aa7□□□□□ -1.29
CD46-215ENST00000488596 TLR1Q15399 786 aa7□□□□□ -1.29
CD46-215ENST00000488596 PGBD3Q8N328 593 aa7□□□□□ -1.29
CD46-215ENST00000488596 EDARADDQ8WWZ3 215 aa7□□□□□ -1.29
CD46-215ENST00000488596 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
CD46-215ENST00000488596 EFHC2Q5JST6 749 aa6.99□□□□□ -1.29
CD46-215ENST00000488596 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
CD46-215ENST00000488596 GDPD2Q9HCC8 539 aa6.99□□□□□ -1.29
CD46-215ENST00000488596 ATXN7L1Q9ULK2 861 aaPredicted RBP6.99□□□□□ -1.29
CD46-215ENST00000488596 INHAP05111 366 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 BMP4P12644 408 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
CD46-215ENST00000488596 FGFR3P22607 806 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 PLA2G4AP47712 749 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 GDF10P55107 478 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
CD46-215ENST00000488596 GDF2Q9UK05 429 aaPredicted RBP6.98□□□□□ -1.29
CD46-215ENST00000488596 COL8A1P27658 744 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 SIRT1Q96EB6 747 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 RRAGCQ9HB90 399 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
CD46-215ENST00000488596 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 HCN2Q9UL51 889 aa6.97□□□□□ -1.29
CD46-215ENST00000488596 PIK3R2O00459 728 aa6.96□□□□□ -1.3
CD46-215ENST00000488596 ATP4AP20648 1035 aa6.96□□□□□ -1.3
CD46-215ENST00000488596 ABL2P42684 1182 aa6.96□□□□□ -1.3
CD46-215ENST00000488596 LINC00114Q6XXX2 140 aa6.96□□□□□ -1.3
CD46-215ENST00000488596 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
CD46-215ENST00000488596 ZCCHC2Q9C0B9 1178 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms