RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 GIGYF1O75420 1035 aaPredicted RBP16.4■□□□□ 0.22
COL1A2-210ENST00000488298 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
COL1A2-210ENST00000488298 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
COL1A2-210ENST00000488298 IL13P35225 146 aa16.39■□□□□ 0.21
COL1A2-210ENST00000488298 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
COL1A2-210ENST00000488298 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
COL1A2-210ENST00000488298 PIGBQ92521 554 aa16.39■□□□□ 0.21
COL1A2-210ENST00000488298 AK7Q96M32 723 aa16.39■□□□□ 0.21
COL1A2-210ENST00000488298 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
COL1A2-210ENST00000488298 MTHFSP49914 203 aa16.38■□□□□ 0.21
COL1A2-210ENST00000488298 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
COL1A2-210ENST00000488298 ITGB4P16144 1822 aa16.38■□□□□ 0.21
COL1A2-210ENST00000488298 KDRP35968 1356 aa16.38■□□□□ 0.21
COL1A2-210ENST00000488298 PHF14O94880 888 aa16.36■□□□□ 0.21
COL1A2-210ENST00000488298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.21
COL1A2-210ENST00000488298 C5P01031 1676 aa16.35■□□□□ 0.21
COL1A2-210ENST00000488298 LOC102724428A0A0B4J2F2 783 aa16.35■□□□□ 0.21
COL1A2-210ENST00000488298 SIK1P57059 783 aa16.35■□□□□ 0.21
COL1A2-210ENST00000488298 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
COL1A2-210ENST00000488298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
COL1A2-210ENST00000488298 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
COL1A2-210ENST00000488298 IFNL2Q8IZJ0 200 aa16.34■□□□□ 0.21
COL1A2-210ENST00000488298 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
COL1A2-210ENST00000488298 SSFA2P28290 1259 aa16.33■□□□□ 0.2
COL1A2-210ENST00000488298 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
COL1A2-210ENST00000488298 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
COL1A2-210ENST00000488298 PHKG2P15735 406 aa16.32■□□□□ 0.2
COL1A2-210ENST00000488298 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
COL1A2-210ENST00000488298 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
COL1A2-210ENST00000488298 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
COL1A2-210ENST00000488298 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
COL1A2-210ENST00000488298 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
COL1A2-210ENST00000488298 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
COL1A2-210ENST00000488298 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
COL1A2-210ENST00000488298 GNPATO15228 680 aa16.3■□□□□ 0.2
COL1A2-210ENST00000488298 ITPK1Q13572 414 aa16.3■□□□□ 0.2
COL1A2-210ENST00000488298 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
COL1A2-210ENST00000488298 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
COL1A2-210ENST00000488298 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
COL1A2-210ENST00000488298 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
COL1A2-210ENST00000488298 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
COL1A2-210ENST00000488298 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-210ENST00000488298 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
COL1A2-210ENST00000488298 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
COL1A2-210ENST00000488298 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
COL1A2-210ENST00000488298 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
COL1A2-210ENST00000488298 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
COL1A2-210ENST00000488298 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
COL1A2-210ENST00000488298 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
COL1A2-210ENST00000488298 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
COL1A2-210ENST00000488298 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
COL1A2-210ENST00000488298 TRAPPC3LQ5T215 181 aa16.25■□□□□ 0.19
COL1A2-210ENST00000488298 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
COL1A2-210ENST00000488298 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
COL1A2-210ENST00000488298 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-210ENST00000488298 MMP10P09238 476 aa16.24■□□□□ 0.19
COL1A2-210ENST00000488298 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-210ENST00000488298 ZNF526Q8TF50 670 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-210ENST00000488298 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
COL1A2-210ENST00000488298 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
COL1A2-210ENST00000488298 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
COL1A2-210ENST00000488298 HMOX1P09601 288 aa16.22■□□□□ 0.19
COL1A2-210ENST00000488298 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
COL1A2-210ENST00000488298 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
COL1A2-210ENST00000488298 ADCY9O60503 1353 aa16.22■□□□□ 0.19
COL1A2-210ENST00000488298 CABP4P57796 275 aa16.21■□□□□ 0.19
COL1A2-210ENST00000488298 TGFB2P61812 414 aa16.21■□□□□ 0.19
COL1A2-210ENST00000488298 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
COL1A2-210ENST00000488298 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.18
COL1A2-210ENST00000488298 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
COL1A2-210ENST00000488298 SIPA1L3O60292 1781 aaPredicted RBP16.19■□□□□ 0.18
COL1A2-210ENST00000488298 MRC1P22897 1456 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 RFC4P35249 363 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 RALBP1Q15311 655 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
COL1A2-210ENST00000488298 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
COL1A2-210ENST00000488298 HSPA6P17066 643 aa16.18■□□□□ 0.18
COL1A2-210ENST00000488298 MTHFSDQ2M296 383 aaKnown RBP16.18■□□□□ 0.18
COL1A2-210ENST00000488298 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
COL1A2-210ENST00000488298 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
COL1A2-210ENST00000488298 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
COL1A2-210ENST00000488298 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
COL1A2-210ENST00000488298 CAPN15O75808 1086 aa16.17■□□□□ 0.18
COL1A2-210ENST00000488298 GYS1P13807 737 aa16.17■□□□□ 0.18
COL1A2-210ENST00000488298 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
COL1A2-210ENST00000488298 PARP3Q9Y6F1 533 aa16.17■□□□□ 0.18
COL1A2-210ENST00000488298 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
COL1A2-210ENST00000488298 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
COL1A2-210ENST00000488298 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
COL1A2-210ENST00000488298 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
COL1A2-210ENST00000488298 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
COL1A2-210ENST00000488298 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
COL1A2-210ENST00000488298 KIF3CO14782 793 aa16.15■□□□□ 0.18
COL1A2-210ENST00000488298 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
COL1A2-210ENST00000488298 COL5A3P25940 1745 aaPredicted RBP16.15■□□□□ 0.18
COL1A2-210ENST00000488298 PRKRIP1Q9H875 184 aaPredicted RBP16.15■□□□□ 0.18
COL1A2-210ENST00000488298 FCHSD2O94868 740 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms