RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
PLSCR1-215ENST00000488253 SIK1P57059 783 aa17.97■□□□□ 0.47
PLSCR1-215ENST00000488253 C4BP0C0L5 1744 aa17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 CABP4P57796 275 aa17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 COL23A1Q86Y22 540 aaPredicted RBP17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 ASAP1Q9ULH1 1129 aa17.96■□□□□ 0.47
PLSCR1-215ENST00000488253 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
PLSCR1-215ENST00000488253 KDRP35968 1356 aa17.94■□□□□ 0.46
PLSCR1-215ENST00000488253 PHF14O94880 888 aa17.94■□□□□ 0.46
PLSCR1-215ENST00000488253 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
PLSCR1-215ENST00000488253 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
PLSCR1-215ENST00000488253 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
PLSCR1-215ENST00000488253 YY1P25490 414 aa17.93■□□□□ 0.46
PLSCR1-215ENST00000488253 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
PLSCR1-215ENST00000488253 HMOX1P09601 288 aa17.92■□□□□ 0.46
PLSCR1-215ENST00000488253 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
PLSCR1-215ENST00000488253 AKAP4Q5JQC9 854 aa17.91■□□□□ 0.46
PLSCR1-215ENST00000488253 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
PLSCR1-215ENST00000488253 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
PLSCR1-215ENST00000488253 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 GNPATO15228 680 aa17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 SSFA2P28290 1259 aa17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
PLSCR1-215ENST00000488253 GPR162Q16538 588 aa17.89■□□□□ 0.45
PLSCR1-215ENST00000488253 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
PLSCR1-215ENST00000488253 ITPK1Q13572 414 aa17.88■□□□□ 0.45
PLSCR1-215ENST00000488253 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
PLSCR1-215ENST00000488253 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
PLSCR1-215ENST00000488253 RTCBQ9Y3I0 505 aaKnown RBP17.87■□□□□ 0.45
PLSCR1-215ENST00000488253 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
PLSCR1-215ENST00000488253 ZNF831Q5JPB2 1677 aa17.86■□□□□ 0.45
PLSCR1-215ENST00000488253 PTCD1O75127 700 aaKnown RBP17.85■□□□□ 0.45
PLSCR1-215ENST00000488253 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PLSCR1-215ENST00000488253 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
PLSCR1-215ENST00000488253 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
PLSCR1-215ENST00000488253 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
PLSCR1-215ENST00000488253 SLC52A2Q9HAB3 445 aa17.83■□□□□ 0.44
PLSCR1-215ENST00000488253 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 CNTNAP4Q9C0A0 1308 aa17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 RNMTO43148 476 aaKnown RBP17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 RC3H1Q5TC82 1133 aaKnown RBP17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 AMIGO3Q86WK7 504 aa17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
PLSCR1-215ENST00000488253 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 RFC4P35249 363 aa17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 SLC4A9Q96Q91 983 aa17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 LGR6Q9HBX8 967 aa17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 CD2APQ9Y5K6 639 aa17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
PLSCR1-215ENST00000488253 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
PLSCR1-215ENST00000488253 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
PLSCR1-215ENST00000488253 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
PLSCR1-215ENST00000488253 CHD4Q14839 1912 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 MRC1P22897 1456 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 TEFQ10587 303 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
PLSCR1-215ENST00000488253 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
PLSCR1-215ENST00000488253 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
PLSCR1-215ENST00000488253 CRKLP46109 303 aaKnown RBP17.77■□□□□ 0.44
PLSCR1-215ENST00000488253 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
PLSCR1-215ENST00000488253 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
PLSCR1-215ENST00000488253 MMP10P09238 476 aa17.76■□□□□ 0.43
PLSCR1-215ENST00000488253 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
PLSCR1-215ENST00000488253 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
PLSCR1-215ENST00000488253 TJP1Q07157 1748 aa17.75■□□□□ 0.43
PLSCR1-215ENST00000488253 NEFMP07197 916 aa17.75■□□□□ 0.43
PLSCR1-215ENST00000488253 CICQ96RK0 1608 aaPredicted RBP17.74■□□□□ 0.43
PLSCR1-215ENST00000488253 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
PLSCR1-215ENST00000488253 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
PLSCR1-215ENST00000488253 RTF1Q92541 710 aaKnown RBP17.73■□□□□ 0.43
PLSCR1-215ENST00000488253 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
PLSCR1-215ENST00000488253 CCDC87Q9NVE4 849 aa17.73■□□□□ 0.43
PLSCR1-215ENST00000488253 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
PLSCR1-215ENST00000488253 MYH14Q7Z406 1995 aaKnown RBP17.72■□□□□ 0.43
PLSCR1-215ENST00000488253 GYS1P13807 737 aa17.72■□□□□ 0.43
PLSCR1-215ENST00000488253 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
PLSCR1-215ENST00000488253 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
PLSCR1-215ENST00000488253 ZPR1O75312 459 aa17.71■□□□□ 0.43
PLSCR1-215ENST00000488253 FCHSD2O94868 740 aa17.71■□□□□ 0.43
PLSCR1-215ENST00000488253 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.425e-6■■■□□ 19.1
PLSCR1-215ENST00000488253 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
PLSCR1-215ENST00000488253 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
PLSCR1-215ENST00000488253 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
PLSCR1-215ENST00000488253 STARD3NLO95772 234 aa17.69■□□□□ 0.42
PLSCR1-215ENST00000488253 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
PLSCR1-215ENST00000488253 INTS5Q6P9B9 1019 aaKnown RBP17.69■□□□□ 0.42
PLSCR1-215ENST00000488253 ZNF784Q8NCA9 323 aaPredicted RBP17.69■□□□□ 0.42
PLSCR1-215ENST00000488253 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
PLSCR1-215ENST00000488253 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
PLSCR1-215ENST00000488253 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
PLSCR1-215ENST00000488253 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
PLSCR1-215ENST00000488253 SRP68Q9UHB9 627 aaKnown RBP17.68■□□□□ 0.42
PLSCR1-215ENST00000488253 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms