RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
PCYT1A-215ENST00000488235 ATP6V1AP38606 617 aa15.33■□□□□ 0.04
PCYT1A-215ENST00000488235 MTHFSP49914 203 aa15.33■□□□□ 0.04
PCYT1A-215ENST00000488235 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.04
PCYT1A-215ENST00000488235 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
PCYT1A-215ENST00000488235 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.043e-8■□□□□ 10.5
PCYT1A-215ENST00000488235 GPR162Q16538 588 aa15.32■□□□□ 0.04
PCYT1A-215ENST00000488235 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
PCYT1A-215ENST00000488235 ZNF784Q8NCA9 323 aaPredicted RBP15.32■□□□□ 0.04
PCYT1A-215ENST00000488235 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
PCYT1A-215ENST00000488235 GNPATO15228 680 aa15.31■□□□□ 0.04
PCYT1A-215ENST00000488235 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
PCYT1A-215ENST00000488235 FLAD1Q8NFF5 587 aa15.31■□□□□ 0.04
PCYT1A-215ENST00000488235 SSFA2P28290 1259 aa15.3■□□□□ 0.04
PCYT1A-215ENST00000488235 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
PCYT1A-215ENST00000488235 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
PCYT1A-215ENST00000488235 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
PCYT1A-215ENST00000488235 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
PCYT1A-215ENST00000488235 HMOX1P09601 288 aa15.29■□□□□ 0.04
PCYT1A-215ENST00000488235 CABP4P57796 275 aa15.29■□□□□ 0.04
PCYT1A-215ENST00000488235 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
PCYT1A-215ENST00000488235 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
PCYT1A-215ENST00000488235 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
PCYT1A-215ENST00000488235 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
PCYT1A-215ENST00000488235 CHD4Q14839 1912 aa15.27■□□□□ 0.03
PCYT1A-215ENST00000488235 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.03
PCYT1A-215ENST00000488235 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
PCYT1A-215ENST00000488235 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
PCYT1A-215ENST00000488235 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
PCYT1A-215ENST00000488235 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
PCYT1A-215ENST00000488235 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
PCYT1A-215ENST00000488235 MYH14Q7Z406 1995 aaKnown RBP15.25■□□□□ 0.03
PCYT1A-215ENST00000488235 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
PCYT1A-215ENST00000488235 CNTNAP4Q9C0A0 1308 aa15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 MTHFSDQ2M296 383 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 ARHGEF1Q92888 912 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 RTCBQ9Y3I0 505 aaKnown RBP15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
PCYT1A-215ENST00000488235 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
PCYT1A-215ENST00000488235 MMP10P09238 476 aa15.23■□□□□ 0.03
PCYT1A-215ENST00000488235 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
PCYT1A-215ENST00000488235 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
PCYT1A-215ENST00000488235 TJP1Q07157 1748 aa15.23■□□□□ 0.03
PCYT1A-215ENST00000488235 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
PCYT1A-215ENST00000488235 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
PCYT1A-215ENST00000488235 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
PCYT1A-215ENST00000488235 MRC1P22897 1456 aa15.21■□□□□ 0.03
PCYT1A-215ENST00000488235 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
PCYT1A-215ENST00000488235 GYS1P13807 737 aa15.21■□□□□ 0.03
PCYT1A-215ENST00000488235 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
PCYT1A-215ENST00000488235 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
PCYT1A-215ENST00000488235 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
PCYT1A-215ENST00000488235 SRP68Q9UHB9 627 aaKnown RBP15.2■□□□□ 0.02
PCYT1A-215ENST00000488235 CICQ96RK0 1608 aaPredicted RBP15.2■□□□□ 0.02
PCYT1A-215ENST00000488235 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
PCYT1A-215ENST00000488235 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 ADRA2BP18089 450 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
PCYT1A-215ENST00000488235 KIAA1551Q9HCM1 1747 aa15.18■□□□□ 0.02
PCYT1A-215ENST00000488235 RFC4P35249 363 aa15.18■□□□□ 0.02
PCYT1A-215ENST00000488235 U2SURPO15042 1029 aaKnown RBP15.17■□□□□ 0.02
PCYT1A-215ENST00000488235 FKBP8Q14318 412 aa15.17■□□□□ 0.02
PCYT1A-215ENST00000488235 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
PCYT1A-215ENST00000488235 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
PCYT1A-215ENST00000488235 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
PCYT1A-215ENST00000488235 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 DDR1Q08345 913 aa15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 IL17REQ8NFR9 667 aa15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
PCYT1A-215ENST00000488235 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
PCYT1A-215ENST00000488235 N4BP2Q86UW6 1770 aaPredicted RBP15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 ADCY9O60503 1353 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 PPP2R1AP30153 589 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 C1QTNF8P60827 252 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 CCDC87Q9NVE4 849 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 ATP10DQ9P241 1426 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
PCYT1A-215ENST00000488235 DPEP1P16444 411 aa15.12■□□□□ 0.01
PCYT1A-215ENST00000488235 KCNA3P22001 575 aa15.12■□□□□ 0.01
PCYT1A-215ENST00000488235 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
PCYT1A-215ENST00000488235 PRKAR2BP31323 418 aa15.11■□□□□ 0.01
PCYT1A-215ENST00000488235 USPL1Q5W0Q7 1092 aa15.11■□□□□ 0.01
PCYT1A-215ENST00000488235 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
PCYT1A-215ENST00000488235 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 POLRMTO00411 1230 aaKnown RBP15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 KCNQ3O43525 872 aa15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 TM4SF1P30408 202 aa15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 TGFB2P61812 414 aa15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 ZNF496Q96IT1 587 aaPredicted RBP15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
PCYT1A-215ENST00000488235 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
PCYT1A-215ENST00000488235 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms