RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
CCDC66-221ENST00000487739 TLR1Q15399 786 aa9.12□□□□□ -0.95
CCDC66-221ENST00000487739 WHAMMQ8TF30 809 aa9.12□□□□□ -0.95
CCDC66-221ENST00000487739 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
CCDC66-221ENST00000487739 PHKA2P46019 1235 aa9.11□□□□□ -0.95
CCDC66-221ENST00000487739 ADAMTS8Q9UP79 889 aa9.11□□□□□ -0.95
CCDC66-221ENST00000487739 RNF225M0QZC1 329 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-221ENST00000487739 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
CCDC66-221ENST00000487739 SCNN1DP51172 638 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 GDF10P55107 478 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 C4orf17Q53FE4 359 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 GPAMQ9HCL2 828 aa9.1□□□□□ -0.95
CCDC66-221ENST00000487739 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
CCDC66-221ENST00000487739 PIK3CDO00329 1044 aa9.09□□□□□ -0.95
CCDC66-221ENST00000487739 INHAP05111 366 aa9.09□□□□□ -0.95
CCDC66-221ENST00000487739 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
CCDC66-221ENST00000487739 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
CCDC66-221ENST00000487739 ARHGEF15O94989 841 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 KCNMA1Q12791 1236 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
CCDC66-221ENST00000487739 PGBD3Q8N328 593 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 ALG2Q9H553 416 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 IGF1RP08069 1367 aa9.08□□□□□ -0.96
CCDC66-221ENST00000487739 SKIP12755 728 aa9.07□□□□□ -0.96
CCDC66-221ENST00000487739 EML3Q32P44 896 aa9.07□□□□□ -0.96
CCDC66-221ENST00000487739 LYPD4Q6UWN0 246 aa9.07□□□□□ -0.96
CCDC66-221ENST00000487739 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
CCDC66-221ENST00000487739 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
CCDC66-221ENST00000487739 LZTS3O60299 673 aaPredicted RBP9.06□□□□□ -0.96
CCDC66-221ENST00000487739 CELA2BP08218 269 aaPredicted RBP9.06□□□□□ -0.96
CCDC66-221ENST00000487739 MX2P20592 715 aa9.06□□□□□ -0.96
CCDC66-221ENST00000487739 MSX1P28360 303 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 MARSP56192 900 aaKnown RBP9.05□□□□□ -0.96
CCDC66-221ENST00000487739 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 CFHR5Q9BXR6 569 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 NOD1Q9Y239 953 aa9.05□□□□□ -0.96
CCDC66-221ENST00000487739 THBS1P07996 1170 aa9.04□□□□□ -0.96
CCDC66-221ENST00000487739 SMTNP53814 917 aa9.04□□□□□ -0.96
CCDC66-221ENST00000487739 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
CCDC66-221ENST00000487739 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
CCDC66-221ENST00000487739 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
CCDC66-221ENST00000487739 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
CCDC66-221ENST00000487739 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
CCDC66-221ENST00000487739 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
CCDC66-221ENST00000487739 MAP2K3P46734 347 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 GSK3AP49840 483 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 NCOA4Q13772 614 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
CCDC66-221ENST00000487739 SLC4A9Q96Q91 983 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 CRISPLD1Q9H336 500 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
CCDC66-221ENST00000487739 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 BCRP11274 1271 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 GTF2IP78347 998 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 PSME1Q06323 249 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 MTFR1Q15390 333 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 ACDQ96AP0 544 aa9.01□□□□□ -0.97
CCDC66-221ENST00000487739 A6NJY4 79 aa9□□□□□ -0.97
CCDC66-221ENST00000487739 BACH1O14867 736 aa9□□□□□ -0.97
CCDC66-221ENST00000487739 RASSF7Q02833 373 aa9□□□□□ -0.97
CCDC66-221ENST00000487739 UBAP2LQ14157 1087 aaKnown RBP9□□□□□ -0.97
CCDC66-221ENST00000487739 TMEM151AQ8N4L1 468 aa9□□□□□ -0.97
CCDC66-221ENST00000487739 ATXN7L1Q9ULK2 861 aaPredicted RBP9□□□□□ -0.97
CCDC66-221ENST00000487739 CDK2AP1O14519 115 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 DEPDC4Q8N2C3 294 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 AIDAQ96BJ3 306 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 LRRC4BQ9NT99 713 aa8.99□□□□□ -0.97
CCDC66-221ENST00000487739 GDF11O95390 407 aa8.98□□□□□ -0.97
CCDC66-221ENST00000487739 ATP4AP20648 1035 aa8.98□□□□□ -0.97
CCDC66-221ENST00000487739 FIGNL1Q6PIW4 674 aa8.98□□□□□ -0.97
CCDC66-221ENST00000487739 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
CCDC66-221ENST00000487739 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
CCDC66-221ENST00000487739 IQSEC3Q9UPP2 1182 aaPredicted RBP8.98□□□□□ -0.97
CCDC66-221ENST00000487739 TATP17735 454 aaPredicted RBP8.97□□□□□ -0.97
CCDC66-221ENST00000487739 IRS1P35568 1242 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 KANK3Q6NY19 840 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 PLEKHM2Q8IWE5 1019 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 ZNF295-AS1Q8N0V1 137 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 NEDD1Q8NHV4 660 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 ABHD17AQ96GS6 310 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
CCDC66-221ENST00000487739 NLRP8Q86W28 1048 aa8.96□□□□□ -0.98
CCDC66-221ENST00000487739 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC66-221ENST00000487739 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
CCDC66-221ENST00000487739 ZNF358Q9NW07 568 aa8.96□□□□□ -0.98
CCDC66-221ENST00000487739 ZDHHC3Q9NYG2 299 aa8.96□□□□□ -0.98
CCDC66-221ENST00000487739 USP3Q9Y6I4 520 aa8.96□□□□□ -0.98
CCDC66-221ENST00000487739 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms