RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L21D6R901 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 ZBTB7BO15156 539 aaPredicted RBP7.98□□□□□ -1.13
TTC3-220ENST00000487711 GPC1P35052 558 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 CENPCQ03188 943 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 TLR1Q15399 786 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
TTC3-220ENST00000487711 RNF217Q8TC41 542 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 PBXIP1Q96AQ6 731 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 DNMT3LQ9UJW3 386 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
TTC3-220ENST00000487711 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
TTC3-220ENST00000487711 PTK7Q13308 1070 aa7.97□□□□□ -1.13
TTC3-220ENST00000487711 SIX5Q8N196 739 aa7.97□□□□□ -1.13
TTC3-220ENST00000487711 ZNF358Q9NW07 568 aa7.97□□□□□ -1.13
TTC3-220ENST00000487711 BACH1O14867 736 aa7.96□□□□□ -1.14
TTC3-220ENST00000487711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.96□□□□□ -1.146e-9■■□□□ 13.5
TTC3-220ENST00000487711 LYSMD3Q7Z3D4 306 aa7.96□□□□□ -1.14
TTC3-220ENST00000487711 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
TTC3-220ENST00000487711 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
TTC3-220ENST00000487711 HRH3Q9Y5N1 445 aa7.96□□□□□ -1.14
TTC3-220ENST00000487711 SFI1A8K8P3 1242 aa7.95□□□□□ -1.14
TTC3-220ENST00000487711 SMTNP53814 917 aa7.95□□□□□ -1.14
TTC3-220ENST00000487711 DPYDQ12882 1025 aa7.95□□□□□ -1.14
TTC3-220ENST00000487711 TMEM214Q6NUQ4 689 aaKnown RBP7.95□□□□□ -1.14
TTC3-220ENST00000487711 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
TTC3-220ENST00000487711 GRIP2Q9C0E4 1043 aa7.95□□□□□ -1.14
TTC3-220ENST00000487711 SEC13P55735 322 aa7.94□□□□□ -1.14
TTC3-220ENST00000487711 SRPK2P78362 688 aaKnown RBP7.94□□□□□ -1.14
TTC3-220ENST00000487711 SLC4A9Q96Q91 983 aa7.94□□□□□ -1.14
TTC3-220ENST00000487711 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
TTC3-220ENST00000487711 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
TTC3-220ENST00000487711 A6NJY4 79 aa7.93□□□□□ -1.14
TTC3-220ENST00000487711 POU4F2Q12837 409 aa7.93□□□□□ -1.14
TTC3-220ENST00000487711 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
TTC3-220ENST00000487711 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
TTC3-220ENST00000487711 PPP1R15AO75807 674 aaPredicted RBP7.92□□□□□ -1.14
TTC3-220ENST00000487711 DKK1O94907 266 aa7.92□□□□□ -1.14
TTC3-220ENST00000487711 ATG7O95352 703 aa7.92□□□□□ -1.14
TTC3-220ENST00000487711 RHOQP17081 205 aa7.92□□□□□ -1.14
TTC3-220ENST00000487711 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
TTC3-220ENST00000487711 TSEN2Q8NCE0 465 aaKnown RBP7.92□□□□□ -1.14
TTC3-220ENST00000487711 M0R2N6 131 aa7.91□□□□□ -1.14
TTC3-220ENST00000487711 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
TTC3-220ENST00000487711 TAS1R3Q7RTX0 852 aa7.91□□□□□ -1.14
TTC3-220ENST00000487711 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
TTC3-220ENST00000487711 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
TTC3-220ENST00000487711 ARXQ96QS3 562 aa7.91□□□□□ -1.14
TTC3-220ENST00000487711 HINFPQ9BQA5 517 aa7.91□□□□□ -1.14
TTC3-220ENST00000487711 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
TTC3-220ENST00000487711 SPATA31C2B4DYI2 1134 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 PHKA2P46019 1235 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 PTSQ03393 145 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 ELOAQ14241 798 aaKnown RBP7.9□□□□□ -1.14
TTC3-220ENST00000487711 MTFR1Q15390 333 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 RHBDD1Q8TEB9 315 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 SCHIP1Q9P0W5 487 aaPredicted RBP7.9□□□□□ -1.14
TTC3-220ENST00000487711 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
TTC3-220ENST00000487711 EPHA4P54764 986 aa7.89□□□□□ -1.15
TTC3-220ENST00000487711 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
TTC3-220ENST00000487711 NIFKQ9BYG3 293 aaKnown RBP7.89□□□□□ -1.15
TTC3-220ENST00000487711 LGR5O75473 907 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 C4orf17Q53FE4 359 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 TBCELQ5QJ74 424 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 IQSEC3Q9UPP2 1182 aaPredicted RBP7.88□□□□□ -1.15
TTC3-220ENST00000487711 USP3Q9Y6I4 520 aa7.88□□□□□ -1.15
TTC3-220ENST00000487711 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
TTC3-220ENST00000487711 FOXK2Q01167 660 aa7.87□□□□□ -1.15
TTC3-220ENST00000487711 WDR44Q5JSH3 913 aa7.87□□□□□ -1.15
TTC3-220ENST00000487711 TSPAN10Q9H1Z9 355 aaPredicted RBP7.87□□□□□ -1.15
TTC3-220ENST00000487711 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
TTC3-220ENST00000487711 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
TTC3-220ENST00000487711 TMEM164Q5U3C3 297 aa7.86□□□□□ -1.15
TTC3-220ENST00000487711 CCDC155Q8N6L0 562 aa7.86□□□□□ -1.15
TTC3-220ENST00000487711 GAS2L1Q99501 681 aaPredicted RBP7.86□□□□□ -1.15
TTC3-220ENST00000487711 NXF1Q9UBU9 619 aaKnown RBP7.86□□□□□ -1.15
TTC3-220ENST00000487711 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 SCG3Q8WXD2 468 aaKnown RBP7.85□□□□□ -1.15
TTC3-220ENST00000487711 AIDAQ96BJ3 306 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 ZNF232Q9UNY5 417 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 CHMP3Q9Y3E7 222 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 DYRK1BQ9Y463 629 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 PARP3Q9Y6F1 533 aa7.85□□□□□ -1.15
TTC3-220ENST00000487711 PPP1R12BO60237 982 aaPredicted RBP7.84□□□□□ -1.15
TTC3-220ENST00000487711 VEGFBP49765 207 aa7.84□□□□□ -1.15
TTC3-220ENST00000487711 SWI5Q1ZZU3 235 aa7.84□□□□□ -1.15
TTC3-220ENST00000487711 RIPOR1Q6ZS17 1223 aa7.84□□□□□ -1.15
TTC3-220ENST00000487711 CHMP7Q8WUX9 453 aaPredicted RBP7.84□□□□□ -1.15
TTC3-220ENST00000487711 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.16
TTC3-220ENST00000487711 A0A1B0GTH6 734 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms