RNA–Protein interactions for RNA: ENST00000487612.1

RRP12-208, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-208ENST00000487612 ZNF853P0CG23 659 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 PHKG2P15735 406 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
RRP12-208ENST00000487612 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
RRP12-208ENST00000487612 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
RRP12-208ENST00000487612 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
RRP12-208ENST00000487612 CYP27B1O15528 508 aa13.29□□□□□ -0.28
RRP12-208ENST00000487612 GNAI1P63096 354 aa13.29□□□□□ -0.28
RRP12-208ENST00000487612 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
RRP12-208ENST00000487612 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
RRP12-208ENST00000487612 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
RRP12-208ENST00000487612 RNMTO43148 476 aaKnown RBP13.28□□□□□ -0.28
RRP12-208ENST00000487612 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
RRP12-208ENST00000487612 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
RRP12-208ENST00000487612 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
RRP12-208ENST00000487612 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
RRP12-208ENST00000487612 RREB1Q92766 1687 aa13.28□□□□□ -0.28
RRP12-208ENST00000487612 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
RRP12-208ENST00000487612 YY1P25490 414 aa13.27□□□□□ -0.29
RRP12-208ENST00000487612 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
RRP12-208ENST00000487612 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
RRP12-208ENST00000487612 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
RRP12-208ENST00000487612 CHL1O00533 1208 aa13.26□□□□□ -0.29
RRP12-208ENST00000487612 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
RRP12-208ENST00000487612 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
RRP12-208ENST00000487612 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
RRP12-208ENST00000487612 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
RRP12-208ENST00000487612 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
RRP12-208ENST00000487612 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
RRP12-208ENST00000487612 DCAF5Q96JK2 942 aa13.25□□□□□ -0.29
RRP12-208ENST00000487612 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
RRP12-208ENST00000487612 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
RRP12-208ENST00000487612 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
RRP12-208ENST00000487612 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
RRP12-208ENST00000487612 MRC1P22897 1456 aa13.24□□□□□ -0.29
RRP12-208ENST00000487612 EXOC5O00471 708 aa13.24□□□□□ -0.29
RRP12-208ENST00000487612 TRIM37O94972 964 aa13.24□□□□□ -0.29
RRP12-208ENST00000487612 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
RRP12-208ENST00000487612 APBA3O96018 575 aa13.23□□□□□ -0.29
RRP12-208ENST00000487612 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
RRP12-208ENST00000487612 TEFQ10587 303 aa13.23□□□□□ -0.29
RRP12-208ENST00000487612 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
RRP12-208ENST00000487612 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
RRP12-208ENST00000487612 DDB1Q16531 1140 aa13.22□□□□□ -0.29
RRP12-208ENST00000487612 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
RRP12-208ENST00000487612 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
RRP12-208ENST00000487612 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
RRP12-208ENST00000487612 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
RRP12-208ENST00000487612 MIS18AQ9NYP9 233 aa13.21□□□□□ -0.29
RRP12-208ENST00000487612 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
RRP12-208ENST00000487612 ERVV-2B6SEH9 535 aa13.2□□□□□ -0.3
RRP12-208ENST00000487612 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
RRP12-208ENST00000487612 CAPN15O75808 1086 aa13.19□□□□□ -0.3
RRP12-208ENST00000487612 SPON1Q9HCB6 807 aa13.19□□□□□ -0.3
RRP12-208ENST00000487612 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
RRP12-208ENST00000487612 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 KCNQ2O43526 872 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 CABP4P57796 275 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 MARCH10Q8NA82 808 aaPredicted RBP13.18□□□□□ -0.3
RRP12-208ENST00000487612 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
RRP12-208ENST00000487612 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
RRP12-208ENST00000487612 VAMP4O75379 141 aa13.17□□□□□ -0.3
RRP12-208ENST00000487612 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
RRP12-208ENST00000487612 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
RRP12-208ENST00000487612 ITGB4P16144 1822 aa13.17□□□□□ -0.3
RRP12-208ENST00000487612 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
RRP12-208ENST00000487612 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
RRP12-208ENST00000487612 DOT1LQ8TEK3 1739 aa13.16□□□□□ -0.3
RRP12-208ENST00000487612 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
RRP12-208ENST00000487612 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
RRP12-208ENST00000487612 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
RRP12-208ENST00000487612 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
RRP12-208ENST00000487612 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
RRP12-208ENST00000487612 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
RRP12-208ENST00000487612 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
RRP12-208ENST00000487612 KCNQ3O43525 872 aa13.15□□□□□ -0.3
RRP12-208ENST00000487612 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
RRP12-208ENST00000487612 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
RRP12-208ENST00000487612 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
RRP12-208ENST00000487612 ALDH1L2Q3SY69 923 aa13.14□□□□□ -0.31
RRP12-208ENST00000487612 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
RRP12-208ENST00000487612 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
RRP12-208ENST00000487612 BCL9O00512 1426 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 BCAR3O75815 825 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
RRP12-208ENST00000487612 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
RRP12-208ENST00000487612 PLSCR1O15162 318 aa13.12□□□□□ -0.31
RRP12-208ENST00000487612 HOXB7P09629 217 aa13.12□□□□□ -0.31
RRP12-208ENST00000487612 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
RRP12-208ENST00000487612 PIGBQ92521 554 aa13.12□□□□□ -0.31
RRP12-208ENST00000487612 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
RRP12-208ENST00000487612 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms