RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 C4orf17Q53FE4 359 aa8.36□□□□□ -1.07
RBM39-234ENST00000487604 GNASQ5JWF2 1037 aa8.36□□□□□ -1.07
RBM39-234ENST00000487604 PPARGC1BQ86YN6 1023 aaKnown RBP8.36□□□□□ -1.07
RBM39-234ENST00000487604 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
RBM39-234ENST00000487604 INHAP05111 366 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 THBS1P07996 1170 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 GDF10P55107 478 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 FLIIQ13045 1269 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 TLR1Q15399 786 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 NUCKS1Q9H1E3 243 aaKnown RBP8.35□□□□□ -1.07
RBM39-234ENST00000487604 GPAMQ9HCL2 828 aa8.35□□□□□ -1.07
RBM39-234ENST00000487604 A0A1B0GTH6 734 aa8.34□□□□□ -1.07
RBM39-234ENST00000487604 RAD21O60216 631 aa8.34□□□□□ -1.07
RBM39-234ENST00000487604 GTF2E1P29083 439 aaPredicted RBP8.34□□□□□ -1.07
RBM39-234ENST00000487604 GSK3AP49840 483 aa8.34□□□□□ -1.07
RBM39-234ENST00000487604 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
RBM39-234ENST00000487604 PCDHGA11Q9Y5H2 935 aa8.34□□□□□ -1.07
RBM39-234ENST00000487604 UBTFP17480 764 aaKnown RBP8.33□□□□□ -1.08
RBM39-234ENST00000487604 MSX1P28360 303 aa8.33□□□□□ -1.08
RBM39-234ENST00000487604 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
RBM39-234ENST00000487604 NFATC2IPQ8NCF5 419 aa8.33□□□□□ -1.08
RBM39-234ENST00000487604 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
RBM39-234ENST00000487604 TRERF1Q96PN7 1200 aa8.33□□□□□ -1.08
RBM39-234ENST00000487604 POM121CA8CG34 1229 aa8.32□□□□□ -1.08
RBM39-234ENST00000487604 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
RBM39-234ENST00000487604 SKIP12755 728 aa8.32□□□□□ -1.08
RBM39-234ENST00000487604 KCNMA1Q12791 1236 aa8.32□□□□□ -1.08
RBM39-234ENST00000487604 IGF1RP08069 1367 aa8.32□□□□□ -1.08
RBM39-234ENST00000487604 TMEM229AB2RXF0 380 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 SMTNP53814 917 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 UBAP2LQ14157 1087 aaKnown RBP8.31□□□□□ -1.08
RBM39-234ENST00000487604 ADAMTS19Q8TE59 1207 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 SLC4A9Q96Q91 983 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 RUBCNLQ9H714 662 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
RBM39-234ENST00000487604 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
RBM39-234ENST00000487604 CFHR5Q9BXR6 569 aa8.3□□□□□ -1.08
RBM39-234ENST00000487604 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
RBM39-234ENST00000487604 CSB-PGBD3P0DP91 1061 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 MX2P20592 715 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 EML3Q32P44 896 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 HDGFL1Q5TGJ6 251 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 PGBD3Q8N328 593 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 ACDQ96AP0 544 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
RBM39-234ENST00000487604 CDK2AP1O14519 115 aa8.28□□□□□ -1.08
RBM39-234ENST00000487604 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
RBM39-234ENST00000487604 NCOA4Q13772 614 aa8.28□□□□□ -1.08
RBM39-234ENST00000487604 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
RBM39-234ENST00000487604 DEPDC4Q8N2C3 294 aa8.28□□□□□ -1.08
RBM39-234ENST00000487604 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
RBM39-234ENST00000487604 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
RBM39-234ENST00000487604 A6NJY4 79 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 GTF2IP78347 998 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 RASSF7Q02833 373 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 MTFR1Q15390 333 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 CRISPLD1Q9H336 500 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 USP3Q9Y6I4 520 aa8.27□□□□□ -1.09
RBM39-234ENST00000487604 BCRP11274 1271 aa8.26□□□□□ -1.09
RBM39-234ENST00000487604 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
RBM39-234ENST00000487604 EFHC2Q5JST6 749 aa8.26□□□□□ -1.09
RBM39-234ENST00000487604 ATP4AP20648 1035 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 TMEM151AQ8N4L1 468 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 NDFIP2Q9NV92 336 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 NSFL1CQ9UNZ2 370 aaKnown RBP8.25□□□□□ -1.09
RBM39-234ENST00000487604 PHF24Q9UPV7 400 aa8.25□□□□□ -1.09
RBM39-234ENST00000487604 BNIP3LO60238 219 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 GDF11O95390 407 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 FNBP4Q8N3X1 1017 aaPredicted RBP8.24□□□□□ -1.09
RBM39-234ENST00000487604 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.24□□□□□ -1.09
RBM39-234ENST00000487604 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 ABHD17AQ96GS6 310 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 ENAMQ9NRM1 1142 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 ZNF358Q9NW07 568 aa8.24□□□□□ -1.09
RBM39-234ENST00000487604 RNF225M0QZC1 329 aaPredicted RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 BACH1O14867 736 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 IRS1P35568 1242 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 MAP2K3P46734 347 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 PSME1Q06323 249 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 PLEKHM2Q8IWE5 1019 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 KLRG1Q96E93 195 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
RBM39-234ENST00000487604 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 SCHIP1Q9P0W5 487 aaPredicted RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 ATXN7L1Q9ULK2 861 aaPredicted RBP8.23□□□□□ -1.09
RBM39-234ENST00000487604 USP17L3A6NCW0 530 aa8.22□□□□□ -1.09
RBM39-234ENST00000487604 USP17L4A6NCW7 530 aa8.22□□□□□ -1.09
RBM39-234ENST00000487604 C2CD2LO14523 706 aa8.22□□□□□ -1.09
RBM39-234ENST00000487604 CTBSQ01459 385 aa8.22□□□□□ -1.09
RBM39-234ENST00000487604 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms