RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	KDR	P35968	1356 aa		32	■■■□□ 2.71
PLOD3-215	ENST00000487563	PER1	O15534	1290 aa	Predicted RBP	32	■■■□□ 2.71
PLOD3-215	ENST00000487563	KDM6A	O15550	1401 aa	Predicted RBP	32	■■■□□ 2.71
PLOD3-215	ENST00000487563	CABP4	P57796	275 aa		31.99	■■■□□ 2.71
PLOD3-215	ENST00000487563	GPR162	Q16538	588 aa		31.99	■■■□□ 2.71
PLOD3-215	ENST00000487563	UBR3	Q6ZT12	1888 aa		31.99	■■■□□ 2.71
PLOD3-215	ENST00000487563	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.98	■■■□□ 2.71
PLOD3-215	ENST00000487563	ITPK1	Q13572	414 aa		31.98	■■■□□ 2.71
PLOD3-215	ENST00000487563	CNGB1	Q14028	1251 aa	Predicted RBP	31.97	■■■□□ 2.71
PLOD3-215	ENST00000487563	PELP1	Q8IZL8	1130 aa	Known RBP	31.97	■■■□□ 2.71
PLOD3-215	ENST00000487563	SSFA2	P28290	1259 aa		31.96	■■■□□ 2.71
PLOD3-215	ENST00000487563	AMIGO3	Q86WK7	504 aa		31.96	■■■□□ 2.71
PLOD3-215	ENST00000487563	RBM42	Q9BTD8	480 aa	Known RBP	31.96	■■■□□ 2.71
PLOD3-215	ENST00000487563	GNPAT	O15228	680 aa		31.95	■■■□□ 2.71
PLOD3-215	ENST00000487563	SMIM5	Q71RC9	77 aa		31.94	■■■□□ 2.7
PLOD3-215	ENST00000487563	NLGN2	Q8NFZ4	835 aa		31.94	■■■□□ 2.7
PLOD3-215	ENST00000487563	DIAPH1	O60610	1272 aa	Known RBP	31.92	■■■□□ 2.7
PLOD3-215	ENST00000487563	NPC1L1	Q9UHC9	1359 aa		31.92	■■■□□ 2.7
PLOD3-215	ENST00000487563	HMOX1	P09601	288 aa		31.91	■■■□□ 2.7
PLOD3-215	ENST00000487563	AKAP4	Q5JQC9	854 aa		31.88	■■■□□ 2.69
PLOD3-215	ENST00000487563	ZNF831	Q5JPB2	1677 aa		31.88	■■■□□ 2.69
PLOD3-215	ENST00000487563	CHD4	Q14839	1912 aa		31.87	■■■□□ 2.69
PLOD3-215	ENST00000487563	NFATC2IP	Q8NCF5	419 aa		31.87	■■■□□ 2.69
PLOD3-215	ENST00000487563	SLC4A9	Q96Q91	983 aa		31.86	■■■□□ 2.69
PLOD3-215	ENST00000487563	RTCB	Q9Y3I0	505 aa	Known RBP	31.86	■■■□□ 2.69
PLOD3-215	ENST00000487563	PTCD1	O75127	700 aa	Known RBP	31.85	■■■□□ 2.69
PLOD3-215	ENST00000487563	CD2AP	Q9Y5K6	639 aa		31.85	■■■□□ 2.69
PLOD3-215	ENST00000487563	SCN11A	Q9UI33	1791 aa		31.85	■■■□□ 2.69
PLOD3-215	ENST00000487563	COL5A3	P25940	1745 aa	Predicted RBP	31.83	■■■□□ 2.69
PLOD3-215	ENST00000487563	CNTNAP4	Q9C0A0	1308 aa		31.81	■■■□□ 2.68
PLOD3-215	ENST00000487563	TRAPPC3L	Q5T215	181 aa		31.81	■■■□□ 2.68
PLOD3-215	ENST00000487563	RC3H1	Q5TC82	1133 aa	Known RBP	31.81	■■■□□ 2.68
PLOD3-215	ENST00000487563	UTRN	P46939	3433 aa		31.81	■■■□□ 2.68
PLOD3-215	ENST00000487563	U2SURP	O15042	1029 aa	Known RBP	31.8	■■■□□ 2.68
PLOD3-215	ENST00000487563	COL3A1	P02461	1466 aa	Predicted RBP	31.79	■■■□□ 2.68
PLOD3-215	ENST00000487563	ADRA2B	P18089	450 aa		31.78	■■■□□ 2.68
PLOD3-215	ENST00000487563	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.78	■■■□□ 2.68
PLOD3-215	ENST00000487563	SLC52A2	Q9HAB3	445 aa		31.78	■■■□□ 2.68
PLOD3-215	ENST00000487563	GRIN3B	O60391	1043 aa		31.77	■■■□□ 2.68
PLOD3-215	ENST00000487563	MTHFSD	Q2M296	383 aa	Known RBP	31.77	■■■□□ 2.68
PLOD3-215	ENST00000487563	RNMT	O43148	476 aa	Known RBP	31.76	■■■□□ 2.67
PLOD3-215	ENST00000487563	RPS6KA4	O75676	772 aa		31.76	■■■□□ 2.67
PLOD3-215	ENST00000487563	YBX3	P16989	372 aa	Known RBP eCLIP	31.76	■■■□□ 2.67
PLOD3-215	ENST00000487563	LGR6	Q9HBX8	967 aa		31.76	■■■□□ 2.67
PLOD3-215	ENST00000487563	RFC4	P35249	363 aa		31.75	■■■□□ 2.67
PLOD3-215	ENST00000487563	CFAP53	Q96M91	514 aa		31.75	■■■□□ 2.67
PLOD3-215	ENST00000487563	MRC1	P22897	1456 aa		31.75	■■■□□ 2.67
PLOD3-215	ENST00000487563	MMP10	P09238	476 aa		31.74	■■■□□ 2.67
PLOD3-215	ENST00000487563	ARHGEF1	Q92888	912 aa	Known RBP	31.73	■■■□□ 2.67
PLOD3-215	ENST00000487563	TJP1	Q07157	1748 aa		31.72	■■■□□ 2.67
PLOD3-215	ENST00000487563	CRKL	P46109	303 aa	Known RBP	31.72	■■■□□ 2.67
PLOD3-215	ENST00000487563	NLGN1	Q8N2Q7	840 aa		31.72	■■■□□ 2.67
PLOD3-215	ENST00000487563	VIRMA	Q69YN4	1812 aa	Known RBP	31.72	■■■□□ 2.67
PLOD3-215	ENST00000487563	CIC	Q96RK0	1608 aa	Predicted RBP	31.71	■■■□□ 2.67
PLOD3-215	ENST00000487563	MYH14	Q7Z406	1995 aa	Known RBP	31.7	■■■□□ 2.66
PLOD3-215	ENST00000487563	SLC39A6	Q13433	755 aa		31.68	■■■□□ 2.66
PLOD3-215	ENST00000487563	GAS2L2	Q8NHY3	880 aa		31.68	■■■□□ 2.66
PLOD3-215	ENST00000487563	C4A	P0C0L4	1744 aa		31.68	■■■□□ 2.66
PLOD3-215	ENST00000487563	GOLGB1	Q14789	3259 aa	Known RBP	31.67	■■■□□ 2.66
PLOD3-215	ENST00000487563	ADAMTS7	Q9UKP4	1686 aa		31.67	■■■□□ 2.66
PLOD3-215	ENST00000487563	GYS1	P13807	737 aa		31.66	■■■□□ 2.66
PLOD3-215	ENST00000487563	DNAJC10	Q8IXB1	793 aa		31.66	■■■□□ 2.66
PLOD3-215	ENST00000487563	WWC3	Q9ULE0	1092 aa		31.66	■■■□□ 2.66
PLOD3-215	ENST00000487563	NUDC	Q9Y266	331 aa		31.64	■■■□□ 2.66
PLOD3-215	ENST00000487563	GNAT3	A8MTJ3	354 aa		31.63	■■■□□ 2.65
PLOD3-215	ENST00000487563	CCDC87	Q9NVE4	849 aa		31.63	■■■□□ 2.65
PLOD3-215	ENST00000487563	PPP2R1A	P30153	589 aa		31.62	■■■□□ 2.65
PLOD3-215	ENST00000487563	TEF	Q10587	303 aa		31.62	■■■□□ 2.65
PLOD3-215	ENST00000487563	KCP	Q6ZWJ8	1503 aa		31.62	■■■□□ 2.65
PLOD3-215	ENST00000487563	PARP3	Q9Y6F1	533 aa		31.62	■■■□□ 2.65
PLOD3-215	ENST00000487563	INTS5	Q6P9B9	1019 aa	Known RBP	31.61	■■■□□ 2.65
PLOD3-215	ENST00000487563	TTC5	Q8N0Z6	440 aa		31.61	■■■□□ 2.65
PLOD3-215	ENST00000487563	USP42	Q9H9J4	1324 aa	Known RBP	31.6	■■■□□ 2.65
PLOD3-215	ENST00000487563	PRKAR2B	P31323	418 aa		31.6	■■■□□ 2.65
PLOD3-215	ENST00000487563	SRP68	Q9UHB9	627 aa	Known RBP	31.6	■■■□□ 2.65
PLOD3-215	ENST00000487563	C10orf71	Q711Q0	1435 aa		31.58	■■■□□ 2.65
PLOD3-215	ENST00000487563	KIF13B	Q9NQT8	1826 aa		31.57	■■■□□ 2.64
PLOD3-215	ENST00000487563	CYP19A1	P11511	503 aa	Predicted RBP	31.57	■■■□□ 2.64
PLOD3-215	ENST00000487563	RSPH6A	Q9H0K4	717 aa		31.57	■■■□□ 2.64
PLOD3-215	ENST00000487563	PXDNL	A1KZ92	1463 aa		31.57	■■■□□ 2.64
PLOD3-215	ENST00000487563	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.56	■■■□□ 2.64
PLOD3-215	ENST00000487563	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.56	■■■□□ 2.64
PLOD3-215	ENST00000487563	VSIG10	Q8N0Z9	540 aa		31.56	■■■□□ 2.64
PLOD3-215	ENST00000487563	UBR2	Q8IWV8	1755 aa		31.56	■■■□□ 2.64
PLOD3-215	ENST00000487563	SOS1	Q07889	1333 aa	Predicted RBP	31.55	■■■□□ 2.64
PLOD3-215	ENST00000487563	ZPR1	O75312	459 aa		31.55	■■■□□ 2.64
PLOD3-215	ENST00000487563	TGFB2	P61812	414 aa		31.55	■■■□□ 2.64
PLOD3-215	ENST00000487563	IL17RE	Q8NFR9	667 aa		31.55	■■■□□ 2.64
PLOD3-215	ENST00000487563	FKBP8	Q14318	412 aa		31.54	■■■□□ 2.64
PLOD3-215	ENST00000487563	PHACTR3	Q96KR7	559 aa		31.53	■■■□□ 2.64
PLOD3-215	ENST00000487563	ZBTB1	Q9Y2K1	713 aa		31.52	■■■□□ 2.64
PLOD3-215	ENST00000487563	COL15A1	P39059	1388 aa		31.52	■■■□□ 2.64
PLOD3-215	ENST00000487563	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.51	■■■□□ 2.64
PLOD3-215	ENST00000487563	KIAA1551	Q9HCM1	1747 aa		31.5	■■■□□ 2.63
PLOD3-215	ENST00000487563		A0A0G2JLW4	131 aa		31.5	■■■□□ 2.63
PLOD3-215	ENST00000487563	STARD3NL	O95772	234 aa		31.5	■■■□□ 2.63
PLOD3-215	ENST00000487563	USPL1	Q5W0Q7	1092 aa		31.5	■■■□□ 2.63
PLOD3-215	ENST00000487563	ZNF790	Q6PG37	636 aa		31.5	■■■□□ 2.63
PLOD3-215	ENST00000487563	SIPA1L3	O60292	1781 aa	Predicted RBP	31.49	■■■□□ 2.63
PLOD3-215	ENST00000487563	GIGYF1	O75420	1035 aa	Predicted RBP	31.48	■■■□□ 2.63

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