RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 BAG6P46379 1132 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 TAF7Q15545 349 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 SMC4Q9NTJ3 1288 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 PHKG2P15735 406 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 BCL2L13Q9BXK5 485 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 MRC1P22897 1456 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 SOS1Q07889 1333 aaPredicted RBP11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
NUDCD3-209ENST00000487118 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 EVA1CP58658 441 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 FAM182BQ5T319 152 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 SEPT12Q8IYM1 358 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 SLIT2O94813 1529 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
NUDCD3-209ENST00000487118 DISP2A7MBM2 1401 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 MS4A1P11836 297 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 IL2RBP14784 551 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 IFNL2Q8IZJ0 200 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 STRN4Q9NRL3 753 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 MIS18AQ9NYP9 233 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
NUDCD3-209ENST00000487118 CYP27B1O15528 508 aa11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 TEFQ10587 303 aa11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.65
NUDCD3-209ENST00000487118 ELL2O00472 640 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 ATF7IPQ6VMQ6 1270 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 ARHGAP45Q92619 1136 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 NOB1Q9ULX3 412 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 PCDH11XQ9BZA7 1347 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 PCDH11YQ9BZA8 1340 aa11.01□□□□□ -0.65
NUDCD3-209ENST00000487118 RLBP1P12271 317 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 TRIM27P14373 513 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
NUDCD3-209ENST00000487118 AAMPQ13685 434 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
NUDCD3-209ENST00000487118 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
NUDCD3-209ENST00000487118 PANK1Q8TE04 598 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 PCDH10Q9P2E7 1040 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
NUDCD3-209ENST00000487118 BTBD11A6QL63 1104 aa10.99□□□□□ -0.65
NUDCD3-209ENST00000487118 HOXB7P09629 217 aa10.99□□□□□ -0.65
NUDCD3-209ENST00000487118 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
NUDCD3-209ENST00000487118 SLC52A2Q9HAB3 445 aa10.99□□□□□ -0.65
NUDCD3-209ENST00000487118 MVPQ14764 893 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-209ENST00000487118 COG6Q9Y2V7 657 aa10.98□□□□□ -0.65
NUDCD3-209ENST00000487118 A0A0G2JS52 829 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 KCNQ3O43525 872 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 MYT1Q01538 1121 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 VPS72Q15906 364 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 FAM98CQ17RN3 349 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 ABCC4O15439 1325 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 SPATA31A1Q5TZJ5 1347 aa10.97□□□□□ -0.65
NUDCD3-209ENST00000487118 TNS1Q9HBL0 1735 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 TNS2Q63HR2 1409 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 PTPRCP08575 1304 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 SPATA31A5Q5VU36 1347 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 SPATA31A7Q8IWB4 1347 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 ERVV-2B6SEH9 535 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 TCERG1O14776 1098 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 CCDC30Q5VVM6 783 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 CHMP4AQ9BY43 222 aa10.96□□□□□ -0.65
NUDCD3-209ENST00000487118 TOGARAM1Q9Y4F4 1720 aa10.95□□□□□ -0.66
NUDCD3-209ENST00000487118 EZH2Q15910 746 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-209ENST00000487118 TMEM57Q8N5G2 664 aa10.95□□□□□ -0.66
NUDCD3-209ENST00000487118 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
NUDCD3-209ENST00000487118 KDM2BQ8NHM5 1336 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms