RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 A0A1B0GTH6 734 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 CELA2BP08218 269 aaPredicted RBP9.5□□□□□ -0.89
SMC4-218ENST00000486711 GSK3AP49840 483 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
SMC4-218ENST00000486711 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 MAP7D1Q3KQU3 841 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 ETNK1Q9HBU6 452 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 IGF1RP08069 1367 aa9.5□□□□□ -0.89
SMC4-218ENST00000486711 PHKA2P46019 1235 aa9.49□□□□□ -0.89
SMC4-218ENST00000486711 RASSF7Q02833 373 aa9.49□□□□□ -0.89
SMC4-218ENST00000486711 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
SMC4-218ENST00000486711 ENAMQ9NRM1 1142 aa9.49□□□□□ -0.89
SMC4-218ENST00000486711 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
SMC4-218ENST00000486711 PLPP7Q8NBV4 271 aa9.48□□□□□ -0.89
SMC4-218ENST00000486711 GPAMQ9HCL2 828 aa9.48□□□□□ -0.89
SMC4-218ENST00000486711 GDF11O95390 407 aa9.47□□□□□ -0.89
SMC4-218ENST00000486711 MX2P20592 715 aa9.47□□□□□ -0.89
SMC4-218ENST00000486711 LBRQ14739 615 aaKnown RBP9.47□□□□□ -0.89
SMC4-218ENST00000486711 TLR1Q15399 786 aa9.47□□□□□ -0.89
SMC4-218ENST00000486711 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
SMC4-218ENST00000486711 RHBDD1Q8TEB9 315 aa9.47□□□□□ -0.89
SMC4-218ENST00000486711 SCARF2Q96GP6 870 aaPredicted RBP9.47□□□□□ -0.89
SMC4-218ENST00000486711 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
SMC4-218ENST00000486711 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.9
SMC4-218ENST00000486711 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
SMC4-218ENST00000486711 CFHR5Q9BXR6 569 aa9.46□□□□□ -0.9
SMC4-218ENST00000486711 PHF24Q9UPV7 400 aa9.46□□□□□ -0.9
SMC4-218ENST00000486711 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
SMC4-218ENST00000486711 STAU1O95793 577 aaKnown RBP9.45□□□□□ -0.9
SMC4-218ENST00000486711 GDF10P55107 478 aa9.45□□□□□ -0.9
SMC4-218ENST00000486711 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
SMC4-218ENST00000486711 INHAP05111 366 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 BCRP11274 1271 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 IRS1P35568 1242 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 SCNN1DP51172 638 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 KCTD17Q8N5Z5 321 aa9.44□□□□□ -0.9
SMC4-218ENST00000486711 THBS1P07996 1170 aa9.43□□□□□ -0.9
SMC4-218ENST00000486711 MSX1P28360 303 aa9.43□□□□□ -0.9
SMC4-218ENST00000486711 MAP2K3P46734 347 aa9.43□□□□□ -0.9
SMC4-218ENST00000486711 EFHC2Q5JST6 749 aa9.43□□□□□ -0.9
SMC4-218ENST00000486711 ACDQ96AP0 544 aa9.42□□□□□ -0.9
SMC4-218ENST00000486711 RUBCNLQ9H714 662 aa9.42□□□□□ -0.9
SMC4-218ENST00000486711 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
SMC4-218ENST00000486711 NEDD1Q8NHV4 660 aa9.41□□□□□ -0.9
SMC4-218ENST00000486711 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
SMC4-218ENST00000486711 PLA2G4AP47712 749 aa9.4□□□□□ -0.9
SMC4-218ENST00000486711 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
SMC4-218ENST00000486711 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
SMC4-218ENST00000486711 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
SMC4-218ENST00000486711 RAD21O60216 631 aa9.39□□□□□ -0.91
SMC4-218ENST00000486711 SMTNP53814 917 aa9.39□□□□□ -0.91
SMC4-218ENST00000486711 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
SMC4-218ENST00000486711 EML3Q32P44 896 aa9.39□□□□□ -0.91
SMC4-218ENST00000486711 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
SMC4-218ENST00000486711 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
SMC4-218ENST00000486711 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
SMC4-218ENST00000486711 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
SMC4-218ENST00000486711 ATXN7L1Q9ULK2 861 aaPredicted RBP9.39□□□□□ -0.91
SMC4-218ENST00000486711 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
SMC4-218ENST00000486711 PIK3CDO00329 1044 aa9.38□□□□□ -0.91
SMC4-218ENST00000486711 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
SMC4-218ENST00000486711 SKIP12755 728 aa9.38□□□□□ -0.91
SMC4-218ENST00000486711 ALG2Q9H553 416 aa9.38□□□□□ -0.91
SMC4-218ENST00000486711 OIP5O43482 229 aa9.37□□□□□ -0.91
SMC4-218ENST00000486711 FLIIQ13045 1269 aa9.37□□□□□ -0.91
SMC4-218ENST00000486711 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
SMC4-218ENST00000486711 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
SMC4-218ENST00000486711 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
SMC4-218ENST00000486711 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
SMC4-218ENST00000486711 FIGNL1Q6PIW4 674 aa9.36□□□□□ -0.91
SMC4-218ENST00000486711 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
SMC4-218ENST00000486711 POM121Q96HA1 1249 aa9.36□□□□□ -0.91
SMC4-218ENST00000486711 SLC4A9Q96Q91 983 aa9.36□□□□□ -0.91
SMC4-218ENST00000486711 GDF2Q9UK05 429 aaPredicted RBP9.36□□□□□ -0.91
SMC4-218ENST00000486711 A6NJY4 79 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 MTFR1Q15390 333 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 KLRG1Q96E93 195 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 ABHD17AQ96GS6 310 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
SMC4-218ENST00000486711 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 BMP4P12644 408 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
SMC4-218ENST00000486711 ATP4AP20648 1035 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 FGFR3P22607 806 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 FOXK2Q01167 660 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 NLRP8Q86W28 1048 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
SMC4-218ENST00000486711 BACH1O14867 736 aa9.33□□□□□ -0.92
SMC4-218ENST00000486711 BNIP3LO60238 219 aa9.33□□□□□ -0.92
SMC4-218ENST00000486711 GTF2IP78347 998 aa9.33□□□□□ -0.92
SMC4-218ENST00000486711 NCOA4Q13772 614 aa9.33□□□□□ -0.92
SMC4-218ENST00000486711 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
SMC4-218ENST00000486711 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
SMC4-218ENST00000486711 IGHA1P01876 353 aa9.32□□□□□ -0.92
SMC4-218ENST00000486711 TATP17735 454 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms