RNA–Protein interactions for RNA: ENST00000486686.1

LAMP3-205, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 5

Gene LAMP3, Length 469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-205ENST00000486686 LINC00116Q8NCU8 138 aa23.05■■□□□ 1.28
LAMP3-205ENST00000486686 PKD1L3Q7Z443 1732 aa23.05■■□□□ 1.28
LAMP3-205ENST00000486686 GNPATO15228 680 aa23.04■■□□□ 1.28
LAMP3-205ENST00000486686 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
LAMP3-205ENST00000486686 NCAPD2Q15021 1401 aa23.04■■□□□ 1.28
LAMP3-205ENST00000486686 ASAP1Q9ULH1 1129 aa23.03■■□□□ 1.28
LAMP3-205ENST00000486686 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 TGFB2P61812 414 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 SMIM5Q71RC9 77 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 EYA1Q99502 592 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 KNSTRNQ9Y448 316 aa23.02■■□□□ 1.28
LAMP3-205ENST00000486686 WWC3Q9ULE0 1092 aa23.01■■□□□ 1.27
LAMP3-205ENST00000486686 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
LAMP3-205ENST00000486686 MMP10P09238 476 aa23■■□□□ 1.27
LAMP3-205ENST00000486686 PHKG2P15735 406 aa23■■□□□ 1.27
LAMP3-205ENST00000486686 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
LAMP3-205ENST00000486686 MAP2P11137 1827 aaKnown RBP23■■□□□ 1.27
LAMP3-205ENST00000486686 ITPK1Q13572 414 aa22.99■■□□□ 1.27
LAMP3-205ENST00000486686 MIER1Q8N108 512 aa22.99■■□□□ 1.27
LAMP3-205ENST00000486686 RTCBQ9Y3I0 505 aaKnown RBP22.99■■□□□ 1.27
LAMP3-205ENST00000486686 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
LAMP3-205ENST00000486686 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
LAMP3-205ENST00000486686 KIF3CO14782 793 aa22.97■■□□□ 1.27
LAMP3-205ENST00000486686 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
LAMP3-205ENST00000486686 ADRA2BP18089 450 aa22.96■■□□□ 1.27
LAMP3-205ENST00000486686 RC3H1Q5TC82 1133 aaKnown RBP22.96■■□□□ 1.27
LAMP3-205ENST00000486686 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
LAMP3-205ENST00000486686 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
LAMP3-205ENST00000486686 HSP90AB1P08238 724 aaKnown RBP22.95■■□□□ 1.26
LAMP3-205ENST00000486686 APLP1P51693 650 aa22.95■■□□□ 1.26
LAMP3-205ENST00000486686 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
LAMP3-205ENST00000486686 RALBP1Q15311 655 aa22.94■■□□□ 1.26
LAMP3-205ENST00000486686 CCDC87Q9NVE4 849 aa22.94■■□□□ 1.26
LAMP3-205ENST00000486686 TOMM70O94826 608 aa22.93■■□□□ 1.26
LAMP3-205ENST00000486686 BCS1LQ9Y276 419 aa22.93■■□□□ 1.26
LAMP3-205ENST00000486686 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
LAMP3-205ENST00000486686 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
LAMP3-205ENST00000486686 RFC4P35249 363 aa22.92■■□□□ 1.26
LAMP3-205ENST00000486686 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
LAMP3-205ENST00000486686 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
LAMP3-205ENST00000486686 RBM42Q9BTD8 480 aaKnown RBP22.92■■□□□ 1.26
LAMP3-205ENST00000486686 CICQ96RK0 1608 aaPredicted RBP22.91■■□□□ 1.26
LAMP3-205ENST00000486686 CCER2I3L3R5 266 aa22.91■■□□□ 1.26
LAMP3-205ENST00000486686 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
LAMP3-205ENST00000486686 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
LAMP3-205ENST00000486686 RPS6KA4O75676 772 aa22.9■■□□□ 1.26
LAMP3-205ENST00000486686 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
LAMP3-205ENST00000486686 PLEKHO1Q53GL0 409 aaPredicted RBP22.9■■□□□ 1.26
LAMP3-205ENST00000486686 PXDNLA1KZ92 1463 aa22.9■■□□□ 1.26
LAMP3-205ENST00000486686 KIF13BQ9NQT8 1826 aa22.89■■□□□ 1.26
LAMP3-205ENST00000486686 CNTNAP4Q9C0A0 1308 aa22.88■■□□□ 1.25
LAMP3-205ENST00000486686 FCHSD2O94868 740 aa22.88■■□□□ 1.25
LAMP3-205ENST00000486686 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
LAMP3-205ENST00000486686 KDRP35968 1356 aa22.88■■□□□ 1.25
LAMP3-205ENST00000486686 GYS1P13807 737 aa22.87■■□□□ 1.25
LAMP3-205ENST00000486686 CABP4P57796 275 aa22.87■■□□□ 1.25
LAMP3-205ENST00000486686 ZNF831Q5JPB2 1677 aa22.87■■□□□ 1.25
LAMP3-205ENST00000486686 C10orf71Q711Q0 1435 aa22.86■■□□□ 1.25
LAMP3-205ENST00000486686 DPEP1P16444 411 aa22.86■■□□□ 1.25
LAMP3-205ENST00000486686 SLC4A9Q96Q91 983 aa22.86■■□□□ 1.25
LAMP3-205ENST00000486686 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
LAMP3-205ENST00000486686 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
LAMP3-205ENST00000486686 CC2D1BQ5T0F9 858 aaKnown RBP22.84■■□□□ 1.25
LAMP3-205ENST00000486686 PIM2Q9P1W9 311 aa22.84■■□□□ 1.25
LAMP3-205ENST00000486686 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
LAMP3-205ENST00000486686 C16orf71Q8IYS4 520 aaPredicted RBP22.83■■□□□ 1.25
LAMP3-205ENST00000486686 DNAJC5GQ8N7S2 189 aa22.83■■□□□ 1.25
LAMP3-205ENST00000486686 MTHFSP49914 203 aa22.82■■□□□ 1.24
LAMP3-205ENST00000486686 RBM46Q8TBY0 533 aaKnown RBP22.82■■□□□ 1.24
LAMP3-205ENST00000486686 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
LAMP3-205ENST00000486686 C1orf141Q5JVX7 400 aa22.81■■□□□ 1.24
LAMP3-205ENST00000486686 C9orf131Q5VYM1 1079 aa22.81■■□□□ 1.24
LAMP3-205ENST00000486686 NMRK2Q9NPI5 230 aa22.81■■□□□ 1.24
LAMP3-205ENST00000486686 C4AP0C0L4 1744 aa22.81■■□□□ 1.24
LAMP3-205ENST00000486686 KIAA1551Q9HCM1 1747 aa22.81■■□□□ 1.24
LAMP3-205ENST00000486686 KCNA3P22001 575 aa22.8■■□□□ 1.24
LAMP3-205ENST00000486686 DALRD3Q5D0E6 543 aaKnown RBP22.8■■□□□ 1.24
LAMP3-205ENST00000486686 KDM2BQ8NHM5 1336 aa22.8■■□□□ 1.24
LAMP3-205ENST00000486686 PTCD1O75127 700 aaKnown RBP22.79■■□□□ 1.24
LAMP3-205ENST00000486686 CRKLP46109 303 aaKnown RBP22.78■■□□□ 1.24
LAMP3-205ENST00000486686 FSTL1Q12841 308 aa22.78■■□□□ 1.24
LAMP3-205ENST00000486686 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.24
LAMP3-205ENST00000486686 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
LAMP3-205ENST00000486686 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
LAMP3-205ENST00000486686 MYH14Q7Z406 1995 aaKnown RBP22.75■■□□□ 1.23
LAMP3-205ENST00000486686 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
LAMP3-205ENST00000486686 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
LAMP3-205ENST00000486686 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
LAMP3-205ENST00000486686 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
LAMP3-205ENST00000486686 FKBP8Q14318 412 aa22.74■■□□□ 1.23
LAMP3-205ENST00000486686 BRCA1P38398 1863 aaKnown RBP22.74■■□□□ 1.23
LAMP3-205ENST00000486686 ZPR1O75312 459 aa22.73■■□□□ 1.23
LAMP3-205ENST00000486686 RNF181Q9P0P0 153 aa22.73■■□□□ 1.23
LAMP3-205ENST00000486686 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
LAMP3-205ENST00000486686 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
LAMP3-205ENST00000486686 TM4SF1P30408 202 aa22.71■■□□□ 1.23
LAMP3-205ENST00000486686 DDR1Q08345 913 aa22.7■■□□□ 1.22
LAMP3-205ENST00000486686 SULT6B1Q6IMI4 303 aa22.7■■□□□ 1.22
LAMP3-205ENST00000486686 INTS5Q6P9B9 1019 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms