RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 TMOD3Q9NYL9 352 aa19.85■□□□□ 0.77
SDCCAG3-211ENST00000486441 GNPATO15228 680 aa19.84■□□□□ 0.77
SDCCAG3-211ENST00000486441 EIF4A2Q14240 407 aaKnown RBP19.84■□□□□ 0.77
SDCCAG3-211ENST00000486441 KDRP35968 1356 aa19.83■□□□□ 0.77
SDCCAG3-211ENST00000486441 MMP10P09238 476 aa19.82■□□□□ 0.76
SDCCAG3-211ENST00000486441 KIAA1551Q9HCM1 1747 aa19.82■□□□□ 0.76
SDCCAG3-211ENST00000486441 PXDNLA1KZ92 1463 aa19.81■□□□□ 0.76
SDCCAG3-211ENST00000486441 CICQ96RK0 1608 aaPredicted RBP19.8■□□□□ 0.76
SDCCAG3-211ENST00000486441 ARHGEF1Q92888 912 aaKnown RBP19.79■□□□□ 0.76
SDCCAG3-211ENST00000486441 KIF13BQ9NQT8 1826 aa19.79■□□□□ 0.76
SDCCAG3-211ENST00000486441 A0A0G2JLW4 131 aa19.78■□□□□ 0.76
SDCCAG3-211ENST00000486441 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
SDCCAG3-211ENST00000486441 TRAPPC3LQ5T215 181 aa19.78■□□□□ 0.76
SDCCAG3-211ENST00000486441 RC3H1Q5TC82 1133 aaKnown RBP19.78■□□□□ 0.76
SDCCAG3-211ENST00000486441 GYS1P13807 737 aa19.77■□□□□ 0.76
SDCCAG3-211ENST00000486441 KCNA3P22001 575 aa19.77■□□□□ 0.76
SDCCAG3-211ENST00000486441 TGFB2P61812 414 aa19.77■□□□□ 0.76
SDCCAG3-211ENST00000486441 MYH14Q7Z406 1995 aaKnown RBP19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 PLEKHG2Q9H7P9 1386 aa19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 NLGN1Q8N2Q7 840 aa19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
SDCCAG3-211ENST00000486441 RPS6KA4O75676 772 aa19.75■□□□□ 0.75
SDCCAG3-211ENST00000486441 KDM6AO15550 1401 aaPredicted RBP19.75■□□□□ 0.75
SDCCAG3-211ENST00000486441 DPEP1P16444 411 aa19.74■□□□□ 0.75
SDCCAG3-211ENST00000486441 N4BP2Q86UW6 1770 aaPredicted RBP19.74■□□□□ 0.75
SDCCAG3-211ENST00000486441 ZNF831Q5JPB2 1677 aa19.74■□□□□ 0.75
SDCCAG3-211ENST00000486441 CNTNAP4Q9C0A0 1308 aa19.74■□□□□ 0.75
SDCCAG3-211ENST00000486441 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
SDCCAG3-211ENST00000486441 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
SDCCAG3-211ENST00000486441 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
SDCCAG3-211ENST00000486441 BCS1LQ9Y276 419 aa19.73■□□□□ 0.75
SDCCAG3-211ENST00000486441 ADRA2BP18089 450 aa19.72■□□□□ 0.75
SDCCAG3-211ENST00000486441 COL5A3P25940 1745 aaPredicted RBP19.71■□□□□ 0.75
SDCCAG3-211ENST00000486441 AEBP1Q8IUX7 1158 aa19.71■□□□□ 0.75
SDCCAG3-211ENST00000486441 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
SDCCAG3-211ENST00000486441 PLEKHO1Q53GL0 409 aaPredicted RBP19.7■□□□□ 0.74
SDCCAG3-211ENST00000486441 PCNTO95613 3336 aa19.7■□□□□ 0.74
SDCCAG3-211ENST00000486441 ARHGAP27Q6ZUM4 889 aa19.69■□□□□ 0.74
SDCCAG3-211ENST00000486441 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
SDCCAG3-211ENST00000486441 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 TOMM70O94826 608 aa19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 HSP90AB1P08238 724 aaKnown RBP19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 DDR1Q08345 913 aa19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 NFATC2IPQ8NCF5 419 aa19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 PANK3Q9H999 370 aa19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 SRP68Q9UHB9 627 aaKnown RBP19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 BRCA1P38398 1863 aaKnown RBP19.68■□□□□ 0.74
SDCCAG3-211ENST00000486441 RFC4P35249 363 aa19.67■□□□□ 0.74
SDCCAG3-211ENST00000486441 CABP4P57796 275 aa19.67■□□□□ 0.74
SDCCAG3-211ENST00000486441 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
SDCCAG3-211ENST00000486441 FKBP8Q14318 412 aa19.67■□□□□ 0.74
SDCCAG3-211ENST00000486441 CCDC87Q9NVE4 849 aa19.67■□□□□ 0.74
SDCCAG3-211ENST00000486441 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
SDCCAG3-211ENST00000486441 FCHSD2O94868 740 aa19.66■□□□□ 0.74
SDCCAG3-211ENST00000486441 CRKLP46109 303 aaKnown RBP19.66■□□□□ 0.74
SDCCAG3-211ENST00000486441 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
SDCCAG3-211ENST00000486441 INTS5Q6P9B9 1019 aaKnown RBP19.66■□□□□ 0.74
SDCCAG3-211ENST00000486441 MTHFSP49914 203 aa19.65■□□□□ 0.74
SDCCAG3-211ENST00000486441 APLP1P51693 650 aa19.65■□□□□ 0.74
SDCCAG3-211ENST00000486441 POLR3GLQ9BT43 218 aa19.65■□□□□ 0.74
SDCCAG3-211ENST00000486441 PARP3Q9Y6F1 533 aa19.65■□□□□ 0.74
SDCCAG3-211ENST00000486441 TM4SF1P30408 202 aa19.64■□□□□ 0.73
SDCCAG3-211ENST00000486441 C9orf131Q5VYM1 1079 aa19.64■□□□□ 0.73
SDCCAG3-211ENST00000486441 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
SDCCAG3-211ENST00000486441 IL13P35225 146 aa19.63■□□□□ 0.73
SDCCAG3-211ENST00000486441 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
SDCCAG3-211ENST00000486441 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
SDCCAG3-211ENST00000486441 PIM2Q9P1W9 311 aa19.62■□□□□ 0.73
SDCCAG3-211ENST00000486441 POLRMTO00411 1230 aaKnown RBP19.61■□□□□ 0.73
SDCCAG3-211ENST00000486441 CHRNA5P30532 468 aa19.61■□□□□ 0.73
SDCCAG3-211ENST00000486441 SULT6B1Q6IMI4 303 aa19.61■□□□□ 0.73
SDCCAG3-211ENST00000486441 TJP1Q07157 1748 aa19.6■□□□□ 0.73
SDCCAG3-211ENST00000486441 LGR6Q9HBX8 967 aa19.6■□□□□ 0.73
SDCCAG3-211ENST00000486441 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
SDCCAG3-211ENST00000486441 RBM46Q8TBY0 533 aaKnown RBP19.59■□□□□ 0.73
SDCCAG3-211ENST00000486441 PRELPP51888 382 aa19.58■□□□□ 0.72
SDCCAG3-211ENST00000486441 HTRA3P83110 453 aa19.58■□□□□ 0.72
SDCCAG3-211ENST00000486441 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
SDCCAG3-211ENST00000486441 MORC1Q86VD1 984 aa19.58■□□□□ 0.72
SDCCAG3-211ENST00000486441 DNAJC10Q8IXB1 793 aa19.58■□□□□ 0.72
SDCCAG3-211ENST00000486441 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
SDCCAG3-211ENST00000486441 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
SDCCAG3-211ENST00000486441 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
SDCCAG3-211ENST00000486441 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 SBF1O95248 1867 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 SLC52A2Q9HAB3 445 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 KCPQ6ZWJ8 1503 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 SCN11AQ9UI33 1791 aa19.55■□□□□ 0.72
SDCCAG3-211ENST00000486441 SLC39A6Q13433 755 aa19.54■□□□□ 0.72
SDCCAG3-211ENST00000486441 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
SDCCAG3-211ENST00000486441 AMER1Q5JTC6 1135 aaPredicted RBP19.54■□□□□ 0.72
SDCCAG3-211ENST00000486441 RRAGCQ9HB90 399 aa19.54■□□□□ 0.72
SDCCAG3-211ENST00000486441 RNF181Q9P0P0 153 aa19.54■□□□□ 0.72
SDCCAG3-211ENST00000486441 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms