RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 ITGB4P16144 1822 aa12.95□□□□□ -0.34
CCDC142-208ENST00000486335 GNPATO15228 680 aa12.95□□□□□ -0.34
CCDC142-208ENST00000486335 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
CCDC142-208ENST00000486335 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
CCDC142-208ENST00000486335 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
CCDC142-208ENST00000486335 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
CCDC142-208ENST00000486335 C10orf71Q711Q0 1435 aa12.94□□□□□ -0.34
CCDC142-208ENST00000486335 GYS1P13807 737 aa12.93□□□□□ -0.34
CCDC142-208ENST00000486335 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
CCDC142-208ENST00000486335 N4BP2Q86UW6 1770 aaPredicted RBP12.93□□□□□ -0.34
CCDC142-208ENST00000486335 CAPN15O75808 1086 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
CCDC142-208ENST00000486335 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 PRELPP51888 382 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 KDRP35968 1356 aa12.92□□□□□ -0.34
CCDC142-208ENST00000486335 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 FSTL1Q12841 308 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 EYA1Q99502 592 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
CCDC142-208ENST00000486335 FCHSD2O94868 740 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 TMF1P82094 1093 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 FLT4P35916 1363 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
CCDC142-208ENST00000486335 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
CCDC142-208ENST00000486335 PHKG2P15735 406 aa12.89□□□□□ -0.35
CCDC142-208ENST00000486335 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
CCDC142-208ENST00000486335 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
CCDC142-208ENST00000486335 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
CCDC142-208ENST00000486335 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
CCDC142-208ENST00000486335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC142-208ENST00000486335 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
CCDC142-208ENST00000486335 KIF24Q5T7B8 1368 aa12.88□□□□□ -0.35
CCDC142-208ENST00000486335 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
CCDC142-208ENST00000486335 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
CCDC142-208ENST00000486335 DDR1Q08345 913 aa12.87□□□□□ -0.35
CCDC142-208ENST00000486335 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
CCDC142-208ENST00000486335 CHRNA5P30532 468 aa12.86□□□□□ -0.35
CCDC142-208ENST00000486335 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
CCDC142-208ENST00000486335 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
CCDC142-208ENST00000486335 WASHC2AQ641Q2 1341 aa12.86□□□□□ -0.35
CCDC142-208ENST00000486335 POTECB2RU33 542 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 ADRA2BP18089 450 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 FKBP8Q14318 412 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
CCDC142-208ENST00000486335 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
CCDC142-208ENST00000486335 TM4SF1P30408 202 aa12.84□□□□□ -0.35
CCDC142-208ENST00000486335 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
CCDC142-208ENST00000486335 C4AP0C0L4 1744 aa12.84□□□□□ -0.35
CCDC142-208ENST00000486335 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
CCDC142-208ENST00000486335 HSPA1AP0DMV8 641 aaKnown RBP12.83□□□□□ -0.36
CCDC142-208ENST00000486335 HSPA1BP0DMV9 641 aaKnown RBP12.83□□□□□ -0.36
CCDC142-208ENST00000486335 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
CCDC142-208ENST00000486335 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
CCDC142-208ENST00000486335 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
CCDC142-208ENST00000486335 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
CCDC142-208ENST00000486335 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
CCDC142-208ENST00000486335 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
CCDC142-208ENST00000486335 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
CCDC142-208ENST00000486335 SBF1O95248 1867 aa12.82□□□□□ -0.36
CCDC142-208ENST00000486335 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
CCDC142-208ENST00000486335 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
CCDC142-208ENST00000486335 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
CCDC142-208ENST00000486335 RFC4P35249 363 aa12.81□□□□□ -0.36
CCDC142-208ENST00000486335 RASSF7Q02833 373 aa12.81□□□□□ -0.36
CCDC142-208ENST00000486335 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
CCDC142-208ENST00000486335 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
CCDC142-208ENST00000486335 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
CCDC142-208ENST00000486335 USP42Q9H9J4 1324 aaKnown RBP12.8□□□□□ -0.36
CCDC142-208ENST00000486335 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
CCDC142-208ENST00000486335 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
CCDC142-208ENST00000486335 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
CCDC142-208ENST00000486335 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
CCDC142-208ENST00000486335 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
CCDC142-208ENST00000486335 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
CCDC142-208ENST00000486335 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.37
CCDC142-208ENST00000486335 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
CCDC142-208ENST00000486335 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
CCDC142-208ENST00000486335 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
CCDC142-208ENST00000486335 NFKBIEO00221 500 aa12.76□□□□□ -0.37
CCDC142-208ENST00000486335 NFIXQ14938 502 aa12.75□□□□□ -0.37
CCDC142-208ENST00000486335 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
CCDC142-208ENST00000486335 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
CCDC142-208ENST00000486335 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
CCDC142-208ENST00000486335 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
CCDC142-208ENST00000486335 LMNB1P20700 586 aa12.74□□□□□ -0.37
CCDC142-208ENST00000486335 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
CCDC142-208ENST00000486335 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
CCDC142-208ENST00000486335 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
CCDC142-208ENST00000486335 SLC34A2O95436 690 aa12.73□□□□□ -0.37
CCDC142-208ENST00000486335 CABP4P57796 275 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms