RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 ATRNO75882 1429 aa17.07■□□□□ 0.32
VTI1BP1-201ENST00000486325 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
VTI1BP1-201ENST00000486325 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
VTI1BP1-201ENST00000486325 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
VTI1BP1-201ENST00000486325 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
VTI1BP1-201ENST00000486325 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
VTI1BP1-201ENST00000486325 SCN11AQ9UI33 1791 aa17.05■□□□□ 0.32
VTI1BP1-201ENST00000486325 ELL2O00472 640 aaPredicted RBP17.04■□□□□ 0.32
VTI1BP1-201ENST00000486325 HOXB7P09629 217 aa17.04■□□□□ 0.32
VTI1BP1-201ENST00000486325 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
VTI1BP1-201ENST00000486325 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
VTI1BP1-201ENST00000486325 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
VTI1BP1-201ENST00000486325 A0A0G2JS52 829 aa17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 MYT1Q01538 1121 aa17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
VTI1BP1-201ENST00000486325 MARCH10Q8NA82 808 aaPredicted RBP17.02■□□□□ 0.32
VTI1BP1-201ENST00000486325 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.31
VTI1BP1-201ENST00000486325 MRC1P22897 1456 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 BCAR3O75815 825 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 MS4A1P11836 297 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
VTI1BP1-201ENST00000486325 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
VTI1BP1-201ENST00000486325 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
VTI1BP1-201ENST00000486325 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
VTI1BP1-201ENST00000486325 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
VTI1BP1-201ENST00000486325 KCNQ3O43525 872 aa16.99■□□□□ 0.31
VTI1BP1-201ENST00000486325 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
VTI1BP1-201ENST00000486325 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
VTI1BP1-201ENST00000486325 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 SIPA1L3O60292 1781 aaPredicted RBP16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 SLC39A6Q13433 755 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
VTI1BP1-201ENST00000486325 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 SNRPA1P09661 255 aaKnown RBP16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 PIGBQ92521 554 aa16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 GLI3P10071 1580 aa16.97■□□□□ 0.31
VTI1BP1-201ENST00000486325 FKBP8Q14318 412 aa16.96■□□□□ 0.31
VTI1BP1-201ENST00000486325 ZKSCAN2Q63HK3 967 aa16.96■□□□□ 0.31
VTI1BP1-201ENST00000486325 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
VTI1BP1-201ENST00000486325 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
VTI1BP1-201ENST00000486325 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
VTI1BP1-201ENST00000486325 RXRBP28702 533 aa16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 BCL9O00512 1426 aa16.95■□□□□ 0.3
VTI1BP1-201ENST00000486325 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
VTI1BP1-201ENST00000486325 PLIN1O60240 522 aa16.94■□□□□ 0.3
VTI1BP1-201ENST00000486325 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
VTI1BP1-201ENST00000486325 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
VTI1BP1-201ENST00000486325 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
VTI1BP1-201ENST00000486325 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
VTI1BP1-201ENST00000486325 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
VTI1BP1-201ENST00000486325 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
VTI1BP1-201ENST00000486325 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
VTI1BP1-201ENST00000486325 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
VTI1BP1-201ENST00000486325 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
VTI1BP1-201ENST00000486325 FAM196AQ6ZSG2 479 aa16.91■□□□□ 0.3
VTI1BP1-201ENST00000486325 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
VTI1BP1-201ENST00000486325 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
VTI1BP1-201ENST00000486325 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
VTI1BP1-201ENST00000486325 PTPRCP08575 1304 aa16.91■□□□□ 0.3
VTI1BP1-201ENST00000486325 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
VTI1BP1-201ENST00000486325 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
VTI1BP1-201ENST00000486325 DZIP1LQ8IYY4 767 aaKnown RBP16.9■□□□□ 0.3
VTI1BP1-201ENST00000486325 CACNA1FO60840 1977 aa16.89■□□□□ 0.3
VTI1BP1-201ENST00000486325 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 FTSJ3Q8IY81 847 aaKnown RBP16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 ITGB4P16144 1822 aa16.89■□□□□ 0.29
VTI1BP1-201ENST00000486325 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
VTI1BP1-201ENST00000486325 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
VTI1BP1-201ENST00000486325 DDX21Q9NR30 783 aaKnown RBP eCLIP16.88■□□□□ 0.29
VTI1BP1-201ENST00000486325 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
VTI1BP1-201ENST00000486325 STARD3NLO95772 234 aa16.87■□□□□ 0.29
VTI1BP1-201ENST00000486325 TRIM27P14373 513 aa16.87■□□□□ 0.29
VTI1BP1-201ENST00000486325 AAMPQ13685 434 aa16.87■□□□□ 0.29
VTI1BP1-201ENST00000486325 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
VTI1BP1-201ENST00000486325 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
VTI1BP1-201ENST00000486325 KCNQ2O43526 872 aa16.86■□□□□ 0.29
VTI1BP1-201ENST00000486325 FLIIQ13045 1269 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms