RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
DCLK1-207ENST00000486239 AEBP1Q8IUX7 1158 aa18.4■□□□□ 0.54
DCLK1-207ENST00000486239 CABP4P57796 275 aa18.39■□□□□ 0.53
DCLK1-207ENST00000486239 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
DCLK1-207ENST00000486239 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
DCLK1-207ENST00000486239 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
DCLK1-207ENST00000486239 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
DCLK1-207ENST00000486239 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
DCLK1-207ENST00000486239 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
DCLK1-207ENST00000486239 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
DCLK1-207ENST00000486239 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
DCLK1-207ENST00000486239 MRC1P22897 1456 aa18.37■□□□□ 0.53
DCLK1-207ENST00000486239 CHD4Q14839 1912 aa18.37■□□□□ 0.53
DCLK1-207ENST00000486239 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
DCLK1-207ENST00000486239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.35■□□□□ 0.53
DCLK1-207ENST00000486239 ADRA2BP18089 450 aa18.35■□□□□ 0.53
DCLK1-207ENST00000486239 YY1P25490 414 aa18.35■□□□□ 0.53
DCLK1-207ENST00000486239 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
DCLK1-207ENST00000486239 UTRNP46939 3433 aa18.35■□□□□ 0.53
DCLK1-207ENST00000486239 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
DCLK1-207ENST00000486239 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
DCLK1-207ENST00000486239 GNPATO15228 680 aa18.33■□□□□ 0.52
DCLK1-207ENST00000486239 ITPK1Q13572 414 aa18.32■□□□□ 0.52
DCLK1-207ENST00000486239 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
DCLK1-207ENST00000486239 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
DCLK1-207ENST00000486239 PHF14O94880 888 aa18.31■□□□□ 0.52
DCLK1-207ENST00000486239 HMOX1P09601 288 aa18.31■□□□□ 0.52
DCLK1-207ENST00000486239 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
DCLK1-207ENST00000486239 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
DCLK1-207ENST00000486239 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
DCLK1-207ENST00000486239 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
DCLK1-207ENST00000486239 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
DCLK1-207ENST00000486239 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
DCLK1-207ENST00000486239 TJP1Q07157 1748 aa18.29■□□□□ 0.52
DCLK1-207ENST00000486239 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
DCLK1-207ENST00000486239 GPR162Q16538 588 aa18.28■□□□□ 0.52
DCLK1-207ENST00000486239 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
DCLK1-207ENST00000486239 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
DCLK1-207ENST00000486239 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
DCLK1-207ENST00000486239 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
DCLK1-207ENST00000486239 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
DCLK1-207ENST00000486239 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.52
DCLK1-207ENST00000486239 UBR2Q8IWV8 1755 aa18.27■□□□□ 0.51
DCLK1-207ENST00000486239 GRIN3BO60391 1043 aa18.26■□□□□ 0.51
DCLK1-207ENST00000486239 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
DCLK1-207ENST00000486239 MYH14Q7Z406 1995 aaKnown RBP18.26■□□□□ 0.51
DCLK1-207ENST00000486239 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
DCLK1-207ENST00000486239 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
DCLK1-207ENST00000486239 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
DCLK1-207ENST00000486239 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
DCLK1-207ENST00000486239 KIF13BQ9NQT8 1826 aa18.24■□□□□ 0.51
DCLK1-207ENST00000486239 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
DCLK1-207ENST00000486239 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
DCLK1-207ENST00000486239 RFC4P35249 363 aa18.24■□□□□ 0.51
DCLK1-207ENST00000486239 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
DCLK1-207ENST00000486239 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
DCLK1-207ENST00000486239 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
DCLK1-207ENST00000486239 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
DCLK1-207ENST00000486239 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
DCLK1-207ENST00000486239 TEFQ10587 303 aa18.22■□□□□ 0.51
DCLK1-207ENST00000486239 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
DCLK1-207ENST00000486239 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
DCLK1-207ENST00000486239 FCHSD2O94868 740 aa18.21■□□□□ 0.51
DCLK1-207ENST00000486239 LGR6Q9HBX8 967 aa18.21■□□□□ 0.51
DCLK1-207ENST00000486239 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
DCLK1-207ENST00000486239 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
DCLK1-207ENST00000486239 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
DCLK1-207ENST00000486239 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
DCLK1-207ENST00000486239 NEFMP07197 916 aa18.19■□□□□ 0.5
DCLK1-207ENST00000486239 MMP10P09238 476 aa18.19■□□□□ 0.5
DCLK1-207ENST00000486239 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
DCLK1-207ENST00000486239 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
DCLK1-207ENST00000486239 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
DCLK1-207ENST00000486239 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
DCLK1-207ENST00000486239 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
DCLK1-207ENST00000486239 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
DCLK1-207ENST00000486239 STARD3NLO95772 234 aa18.17■□□□□ 0.5
DCLK1-207ENST00000486239 GYS1P13807 737 aa18.17■□□□□ 0.5
DCLK1-207ENST00000486239 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
DCLK1-207ENST00000486239 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
DCLK1-207ENST00000486239 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
DCLK1-207ENST00000486239 USP42Q9H9J4 1324 aaKnown RBP18.17■□□□□ 0.5
DCLK1-207ENST00000486239 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
DCLK1-207ENST00000486239 TGFB2P61812 414 aa18.16■□□□□ 0.5
DCLK1-207ENST00000486239 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
DCLK1-207ENST00000486239 ZPR1O75312 459 aa18.15■□□□□ 0.5
DCLK1-207ENST00000486239 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
DCLK1-207ENST00000486239 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
DCLK1-207ENST00000486239 ZNF790Q6PG37 636 aa18.15■□□□□ 0.5
DCLK1-207ENST00000486239 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
DCLK1-207ENST00000486239 COL15A1P39059 1388 aa18.15■□□□□ 0.5
DCLK1-207ENST00000486239 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
DCLK1-207ENST00000486239 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
DCLK1-207ENST00000486239 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
DCLK1-207ENST00000486239 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
DCLK1-207ENST00000486239 A0A087WZG4 1122 aa18.13■□□□□ 0.49
DCLK1-207ENST00000486239 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
DCLK1-207ENST00000486239 RALBP1Q15311 655 aa18.13■□□□□ 0.49
DCLK1-207ENST00000486239 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
DCLK1-207ENST00000486239 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms