RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
MDH1-213ENST00000485781 KIF20BQ96Q89 1820 aa16.03■□□□□ 0.16
MDH1-213ENST00000485781 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
MDH1-213ENST00000485781 FCHSD2O94868 740 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 TRAPPC3LQ5T215 181 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 NLGN1Q8N2Q7 840 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 CCDC87Q9NVE4 849 aa16.02■□□□□ 0.16
MDH1-213ENST00000485781 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
MDH1-213ENST00000485781 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
MDH1-213ENST00000485781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.154e-11■□□□□ 8.9
MDH1-213ENST00000485781 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
MDH1-213ENST00000485781 PARP3Q9Y6F1 533 aa16■□□□□ 0.15
MDH1-213ENST00000485781 PHKG2P15735 406 aa15.99■□□□□ 0.15
MDH1-213ENST00000485781 DPEP1P16444 411 aa15.99■□□□□ 0.15
MDH1-213ENST00000485781 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
MDH1-213ENST00000485781 DNAJC5GQ8N7S2 189 aa15.99■□□□□ 0.15
MDH1-213ENST00000485781 EYA1Q99502 592 aa15.99■□□□□ 0.15
MDH1-213ENST00000485781 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
MDH1-213ENST00000485781 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
MDH1-213ENST00000485781 RFC4P35249 363 aa15.98■□□□□ 0.15
MDH1-213ENST00000485781 C10orf71Q711Q0 1435 aa15.98■□□□□ 0.15
MDH1-213ENST00000485781 RBM46Q8TBY0 533 aaKnown RBP15.98■□□□□ 0.15
MDH1-213ENST00000485781 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
MDH1-213ENST00000485781 ADRA2BP18089 450 aa15.97■□□□□ 0.15
MDH1-213ENST00000485781 C9orf131Q5VYM1 1079 aa15.97■□□□□ 0.15
MDH1-213ENST00000485781 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
MDH1-213ENST00000485781 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
MDH1-213ENST00000485781 ARHGEF1Q92888 912 aaKnown RBP15.96■□□□□ 0.15
MDH1-213ENST00000485781 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
MDH1-213ENST00000485781 RC3H1Q5TC82 1133 aaKnown RBP15.95■□□□□ 0.14
MDH1-213ENST00000485781 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 RPS6KA4O75676 772 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 GYS1P13807 737 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 FSTL1Q12841 308 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 CARD14Q9BXL6 1004 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 WDR90Q96KV7 1748 aa15.94■□□□□ 0.14
MDH1-213ENST00000485781 KDRP35968 1356 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
MDH1-213ENST00000485781 HTRA3P83110 453 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 RNF181Q9P0P0 153 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 C4AP0C0L4 1744 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
MDH1-213ENST00000485781 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
MDH1-213ENST00000485781 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
MDH1-213ENST00000485781 CAPN15O75808 1086 aa15.91■□□□□ 0.14
MDH1-213ENST00000485781 CABP4P57796 275 aa15.91■□□□□ 0.14
MDH1-213ENST00000485781 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
MDH1-213ENST00000485781 POLKQ9UBT6 870 aa15.91■□□□□ 0.14
MDH1-213ENST00000485781 KCNA3P22001 575 aa15.9■□□□□ 0.14
MDH1-213ENST00000485781 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
MDH1-213ENST00000485781 EIF4A2Q14240 407 aaKnown RBP15.9■□□□□ 0.14
MDH1-213ENST00000485781 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
MDH1-213ENST00000485781 COL13A1Q5TAT6 717 aaPredicted RBP15.9■□□□□ 0.14
MDH1-213ENST00000485781 RRAGCQ9HB90 399 aa15.9■□□□□ 0.14
MDH1-213ENST00000485781 KCPQ6ZWJ8 1503 aa15.89■□□□□ 0.13
MDH1-213ENST00000485781 ANKRD26Q9UPS8 1709 aa15.89■□□□□ 0.13
MDH1-213ENST00000485781 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
MDH1-213ENST00000485781 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
MDH1-213ENST00000485781 ARFGEF1Q9Y6D6 1849 aa15.89■□□□□ 0.13
MDH1-213ENST00000485781 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
MDH1-213ENST00000485781 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
MDH1-213ENST00000485781 TNS4Q8IZW8 715 aa15.88■□□□□ 0.13
MDH1-213ENST00000485781 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
MDH1-213ENST00000485781 CRKLP46109 303 aaKnown RBP15.87■□□□□ 0.13
MDH1-213ENST00000485781 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
MDH1-213ENST00000485781 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
MDH1-213ENST00000485781 POLR3GLQ9BT43 218 aa15.87■□□□□ 0.13
MDH1-213ENST00000485781 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
MDH1-213ENST00000485781 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
MDH1-213ENST00000485781 CHRNA5P30532 468 aa15.86■□□□□ 0.13
MDH1-213ENST00000485781 MTHFSP49914 203 aa15.86■□□□□ 0.13
MDH1-213ENST00000485781 FKBP8Q14318 412 aa15.86■□□□□ 0.13
MDH1-213ENST00000485781 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
MDH1-213ENST00000485781 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
MDH1-213ENST00000485781 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
MDH1-213ENST00000485781 ZPR1O75312 459 aa15.84■□□□□ 0.13
MDH1-213ENST00000485781 DDR1Q08345 913 aa15.84■□□□□ 0.13
MDH1-213ENST00000485781 TNRC6CQ9HCJ0 1690 aaKnown RBP15.83■□□□□ 0.13
MDH1-213ENST00000485781 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
MDH1-213ENST00000485781 NFATC2IPQ8NCF5 419 aa15.82■□□□□ 0.12
MDH1-213ENST00000485781 POLRMTO00411 1230 aaKnown RBP15.81■□□□□ 0.12
MDH1-213ENST00000485781 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
MDH1-213ENST00000485781 RASSF7Q02833 373 aa15.81■□□□□ 0.12
MDH1-213ENST00000485781 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
MDH1-213ENST00000485781 PRELPP51888 382 aa15.8■□□□□ 0.12
MDH1-213ENST00000485781 SBF1O95248 1867 aa15.8■□□□□ 0.12
MDH1-213ENST00000485781 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
MDH1-213ENST00000485781 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
MDH1-213ENST00000485781 LMNB1P20700 586 aa15.79■□□□□ 0.12
MDH1-213ENST00000485781 TM4SF1P30408 202 aa15.79■□□□□ 0.12
MDH1-213ENST00000485781 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
MDH1-213ENST00000485781 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
MDH1-213ENST00000485781 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
MDH1-213ENST00000485781 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms