RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.46■■■□□ 2.15
GTF3C5-209ENST00000485692 PER1O15534 1290 aaPredicted RBP28.46■■■□□ 2.15
GTF3C5-209ENST00000485692 SSFA2P28290 1259 aa28.46■■■□□ 2.15
GTF3C5-209ENST00000485692 C1orf141Q5JVX7 400 aa28.46■■■□□ 2.15
GTF3C5-209ENST00000485692 PHF14O94880 888 aa28.45■■■□□ 2.14
GTF3C5-209ENST00000485692 KDM6AO15550 1401 aaPredicted RBP28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 GOLGB1Q14789 3259 aaKnown RBP28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 CHD4Q14839 1912 aa28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 ITPK1Q13572 414 aa28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 AMIGO3Q86WK7 504 aa28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 NLGN2Q8NFZ4 835 aa28.44■■■□□ 2.14
GTF3C5-209ENST00000485692 MTHFSP49914 203 aa28.43■■■□□ 2.14
GTF3C5-209ENST00000485692 ZNF831Q5JPB2 1677 aa28.42■■■□□ 2.14
GTF3C5-209ENST00000485692 CABP4P57796 275 aa28.42■■■□□ 2.14
GTF3C5-209ENST00000485692 GNPATO15228 680 aa28.41■■■□□ 2.14
GTF3C5-209ENST00000485692 CC2D1BQ5T0F9 858 aaKnown RBP28.4■■■□□ 2.14
GTF3C5-209ENST00000485692 PELP1Q8IZL8 1130 aaKnown RBP28.4■■■□□ 2.14
GTF3C5-209ENST00000485692 RBM42Q9BTD8 480 aaKnown RBP28.39■■■□□ 2.14
GTF3C5-209ENST00000485692 CD2APQ9Y5K6 639 aa28.39■■■□□ 2.14
GTF3C5-209ENST00000485692 SMIM5Q71RC9 77 aa28.38■■■□□ 2.13
GTF3C5-209ENST00000485692 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
GTF3C5-209ENST00000485692 ZNF784Q8NCA9 323 aaPredicted RBP28.36■■■□□ 2.13
GTF3C5-209ENST00000485692 SLC4A9Q96Q91 983 aa28.36■■■□□ 2.13
GTF3C5-209ENST00000485692 DIAPH1O60610 1272 aaKnown RBP28.34■■■□□ 2.13
GTF3C5-209ENST00000485692 AKAP4Q5JQC9 854 aa28.34■■■□□ 2.13
GTF3C5-209ENST00000485692 NFATC2IPQ8NCF5 419 aa28.34■■■□□ 2.13
GTF3C5-209ENST00000485692 RTCBQ9Y3I0 505 aaKnown RBP28.34■■■□□ 2.13
GTF3C5-209ENST00000485692 COL5A3P25940 1745 aaPredicted RBP28.33■■■□□ 2.13
GTF3C5-209ENST00000485692 RC3H1Q5TC82 1133 aaKnown RBP28.33■■■□□ 2.13
GTF3C5-209ENST00000485692 SCN11AQ9UI33 1791 aa28.32■■■□□ 2.12
GTF3C5-209ENST00000485692 GRIN3BO60391 1043 aa28.32■■■□□ 2.12
GTF3C5-209ENST00000485692 CNTNAP4Q9C0A0 1308 aa28.32■■■□□ 2.12
GTF3C5-209ENST00000485692 HMOX1P09601 288 aa28.31■■■□□ 2.12
GTF3C5-209ENST00000485692 TRAPPC3LQ5T215 181 aa28.31■■■□□ 2.12
GTF3C5-209ENST00000485692 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.127e-12■□□□□ 8.3
GTF3C5-209ENST00000485692 ADRA2BP18089 450 aa28.3■■■□□ 2.12
GTF3C5-209ENST00000485692 PTCD1O75127 700 aaKnown RBP28.29■■■□□ 2.12
GTF3C5-209ENST00000485692 RPS6KA4O75676 772 aa28.26■■■□□ 2.11
GTF3C5-209ENST00000485692 SLC52A2Q9HAB3 445 aa28.26■■■□□ 2.11
GTF3C5-209ENST00000485692 CICQ96RK0 1608 aaPredicted RBP28.25■■■□□ 2.11
GTF3C5-209ENST00000485692 CNGB1Q14028 1251 aaPredicted RBP28.25■■■□□ 2.11
GTF3C5-209ENST00000485692 NLGN1Q8N2Q7 840 aa28.25■■■□□ 2.11
GTF3C5-209ENST00000485692 ARHGEF1Q92888 912 aaKnown RBP28.25■■■□□ 2.11
GTF3C5-209ENST00000485692 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
GTF3C5-209ENST00000485692 MRC1P22897 1456 aa28.24■■■□□ 2.11
GTF3C5-209ENST00000485692 MMP10P09238 476 aa28.24■■■□□ 2.11
GTF3C5-209ENST00000485692 LGR6Q9HBX8 967 aa28.24■■■□□ 2.11
GTF3C5-209ENST00000485692 RNMTO43148 476 aaKnown RBP28.23■■■□□ 2.11
GTF3C5-209ENST00000485692 RFC4P35249 363 aa28.23■■■□□ 2.11
GTF3C5-209ENST00000485692 MTHFSDQ2M296 383 aaKnown RBP28.23■■■□□ 2.11
GTF3C5-209ENST00000485692 CRKLP46109 303 aaKnown RBP28.22■■■□□ 2.11
GTF3C5-209ENST00000485692 MYH14Q7Z406 1995 aaKnown RBP28.22■■■□□ 2.11
GTF3C5-209ENST00000485692 TJP1Q07157 1748 aa28.21■■■□□ 2.11
GTF3C5-209ENST00000485692 ADAMTS7Q9UKP4 1686 aa28.2■■■□□ 2.11
GTF3C5-209ENST00000485692 U2SURPO15042 1029 aaKnown RBP28.2■■■□□ 2.1
GTF3C5-209ENST00000485692 VIRMAQ69YN4 1812 aaKnown RBP28.2■■■□□ 2.1
GTF3C5-209ENST00000485692 GYS1P13807 737 aa28.19■■■□□ 2.1
GTF3C5-209ENST00000485692 C4AP0C0L4 1744 aa28.18■■■□□ 2.1
GTF3C5-209ENST00000485692 CFAP53Q96M91 514 aa28.16■■■□□ 2.1
GTF3C5-209ENST00000485692 KIF13BQ9NQT8 1826 aa28.15■■■□□ 2.1
GTF3C5-209ENST00000485692 SLC39A6Q13433 755 aa28.14■■■□□ 2.1
GTF3C5-209ENST00000485692 GAS2L2Q8NHY3 880 aa28.14■■■□□ 2.1
GTF3C5-209ENST00000485692 INTS5Q6P9B9 1019 aaKnown RBP28.13■■■□□ 2.09
GTF3C5-209ENST00000485692 DNAJC10Q8IXB1 793 aa28.13■■■□□ 2.09
GTF3C5-209ENST00000485692 PARP3Q9Y6F1 533 aa28.13■■■□□ 2.09
GTF3C5-209ENST00000485692 KCPQ6ZWJ8 1503 aa28.13■■■□□ 2.09
GTF3C5-209ENST00000485692 C10orf71Q711Q0 1435 aa28.12■■■□□ 2.09
GTF3C5-209ENST00000485692 TGFB2P61812 414 aa28.12■■■□□ 2.09
GTF3C5-209ENST00000485692 CCDC87Q9NVE4 849 aa28.12■■■□□ 2.09
GTF3C5-209ENST00000485692 USP42Q9H9J4 1324 aaKnown RBP28.12■■■□□ 2.09
GTF3C5-209ENST00000485692 PXDNLA1KZ92 1463 aa28.11■■■□□ 2.09
GTF3C5-209ENST00000485692 VSIG10Q8N0Z9 540 aa28.11■■■□□ 2.09
GTF3C5-209ENST00000485692 GNAT3A8MTJ3 354 aa28.1■■■□□ 2.09
GTF3C5-209ENST00000485692 WWC3Q9ULE0 1092 aa28.1■■■□□ 2.09
GTF3C5-209ENST00000485692 CYP19A1P11511 503 aaPredicted RBP28.09■■■□□ 2.09
GTF3C5-209ENST00000485692 SRP68Q9UHB9 627 aaKnown RBP28.09■■■□□ 2.09
GTF3C5-209ENST00000485692 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
GTF3C5-209ENST00000485692 UBR2Q8IWV8 1755 aa28.08■■■□□ 2.09
GTF3C5-209ENST00000485692 KIAA1551Q9HCM1 1747 aa28.07■■■□□ 2.08
GTF3C5-209ENST00000485692 TEFQ10587 303 aa28.07■■■□□ 2.08
GTF3C5-209ENST00000485692 TTC5Q8N0Z6 440 aa28.07■■■□□ 2.08
GTF3C5-209ENST00000485692 SOS1Q07889 1333 aaPredicted RBP28.07■■■□□ 2.08
GTF3C5-209ENST00000485692 GIGYF1O75420 1035 aaPredicted RBP28.06■■■□□ 2.08
GTF3C5-209ENST00000485692 PPP2R1AP30153 589 aa28.06■■■□□ 2.08
GTF3C5-209ENST00000485692 FKBP8Q14318 412 aa28.06■■■□□ 2.08
GTF3C5-209ENST00000485692 ZPR1O75312 459 aa28.05■■■□□ 2.08
GTF3C5-209ENST00000485692 C1QTNF8P60827 252 aa28.05■■■□□ 2.08
GTF3C5-209ENST00000485692 N4BP2Q86UW6 1770 aaPredicted RBP28.05■■■□□ 2.08
GTF3C5-209ENST00000485692 IL17REQ8NFR9 667 aa28.05■■■□□ 2.08
GTF3C5-209ENST00000485692 PRKAR2BP31323 418 aa28.04■■■□□ 2.08
GTF3C5-209ENST00000485692 RSPH6AQ9H0K4 717 aa28.04■■■□□ 2.08
GTF3C5-209ENST00000485692 ATP10DQ9P241 1426 aa28.03■■■□□ 2.08
GTF3C5-209ENST00000485692 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
GTF3C5-209ENST00000485692 COL15A1P39059 1388 aa28.02■■■□□ 2.08
GTF3C5-209ENST00000485692 ZBTB1Q9Y2K1 713 aa28.02■■■□□ 2.08
GTF3C5-209ENST00000485692 SIPA1L3O60292 1781 aaPredicted RBP28.01■■■□□ 2.08
GTF3C5-209ENST00000485692 ADCY9O60503 1353 aa28.01■■■□□ 2.07
GTF3C5-209ENST00000485692 STARD3NLO95772 234 aa28.01■■■□□ 2.07
GTF3C5-209ENST00000485692 DDR1Q08345 913 aa28.01■■■□□ 2.07
GTF3C5-209ENST00000485692 USPL1Q5W0Q7 1092 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms