RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
SSR4-210ENST00000485612 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
SSR4-210ENST00000485612 CYP27B1O15528 508 aa17.18■□□□□ 0.34
SSR4-210ENST00000485612 TMF1P82094 1093 aa17.18■□□□□ 0.34
SSR4-210ENST00000485612 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
SSR4-210ENST00000485612 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
SSR4-210ENST00000485612 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
SSR4-210ENST00000485612 KCNA3P22001 575 aa17.17■□□□□ 0.34
SSR4-210ENST00000485612 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
SSR4-210ENST00000485612 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SSR4-210ENST00000485612 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
SSR4-210ENST00000485612 RRS1Q15050 365 aaKnown RBP17.16■□□□□ 0.34
SSR4-210ENST00000485612 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
SSR4-210ENST00000485612 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
SSR4-210ENST00000485612 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
SSR4-210ENST00000485612 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
SSR4-210ENST00000485612 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SSR4-210ENST00000485612 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
SSR4-210ENST00000485612 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SSR4-210ENST00000485612 TESK2Q96S53 571 aa17.13■□□□□ 0.33
SSR4-210ENST00000485612 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
SSR4-210ENST00000485612 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
SSR4-210ENST00000485612 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
SSR4-210ENST00000485612 ITGB4P16144 1822 aa17.12■□□□□ 0.33
SSR4-210ENST00000485612 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
SSR4-210ENST00000485612 VEGFAP15692 232 aaPredicted RBP17.11■□□□□ 0.33
SSR4-210ENST00000485612 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
SSR4-210ENST00000485612 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
SSR4-210ENST00000485612 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
SSR4-210ENST00000485612 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SSR4-210ENST00000485612 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
SSR4-210ENST00000485612 GYS1P13807 737 aa17.1■□□□□ 0.33
SSR4-210ENST00000485612 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
SSR4-210ENST00000485612 RFC4P35249 363 aa17.09■□□□□ 0.33
SSR4-210ENST00000485612 BRCA1P38398 1863 aaKnown RBP17.08■□□□□ 0.33
SSR4-210ENST00000485612 ADRA2BP18089 450 aa17.08■□□□□ 0.32
SSR4-210ENST00000485612 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
SSR4-210ENST00000485612 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
SSR4-210ENST00000485612 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
SSR4-210ENST00000485612 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
SSR4-210ENST00000485612 INSRP06213 1382 aa17.07■□□□□ 0.32
SSR4-210ENST00000485612 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
SSR4-210ENST00000485612 PCDH10Q9P2E7 1040 aa17.07■□□□□ 0.32
SSR4-210ENST00000485612 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SSR4-210ENST00000485612 CHRNA5P30532 468 aa17.05■□□□□ 0.32
SSR4-210ENST00000485612 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
SSR4-210ENST00000485612 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
SSR4-210ENST00000485612 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
SSR4-210ENST00000485612 FYB1O15117 783 aa17.04■□□□□ 0.32
SSR4-210ENST00000485612 FOXN1O15353 648 aa17.04■□□□□ 0.32
SSR4-210ENST00000485612 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
SSR4-210ENST00000485612 RASSF7Q02833 373 aa17.04■□□□□ 0.32
SSR4-210ENST00000485612 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
SSR4-210ENST00000485612 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
SSR4-210ENST00000485612 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
SSR4-210ENST00000485612 FLT4P35916 1363 aa17.02■□□□□ 0.32
SSR4-210ENST00000485612 LMNB1P20700 586 aa17.02■□□□□ 0.32
SSR4-210ENST00000485612 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SSR4-210ENST00000485612 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
SSR4-210ENST00000485612 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
SSR4-210ENST00000485612 SBF1O95248 1867 aa17.01■□□□□ 0.31
SSR4-210ENST00000485612 CNTNAP4Q9C0A0 1308 aa17.01■□□□□ 0.31
SSR4-210ENST00000485612 KDRP35968 1356 aa17.01■□□□□ 0.31
SSR4-210ENST00000485612 PHKG2P15735 406 aa17■□□□□ 0.31
SSR4-210ENST00000485612 DDR1Q08345 913 aa17■□□□□ 0.31
SSR4-210ENST00000485612 FKBP8Q14318 412 aa17■□□□□ 0.31
SSR4-210ENST00000485612 FAM161AQ3B820 660 aa17■□□□□ 0.31
SSR4-210ENST00000485612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
SSR4-210ENST00000485612 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
SSR4-210ENST00000485612 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
SSR4-210ENST00000485612 POTECB2RU33 542 aa16.99■□□□□ 0.31
SSR4-210ENST00000485612 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
SSR4-210ENST00000485612 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
SSR4-210ENST00000485612 SRP68Q9UHB9 627 aaKnown RBP16.98■□□□□ 0.31
SSR4-210ENST00000485612 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
SSR4-210ENST00000485612 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
SSR4-210ENST00000485612 TM4SF1P30408 202 aa16.95■□□□□ 0.3
SSR4-210ENST00000485612 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
SSR4-210ENST00000485612 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
SSR4-210ENST00000485612 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SSR4-210ENST00000485612 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
SSR4-210ENST00000485612 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
SSR4-210ENST00000485612 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SSR4-210ENST00000485612 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
SSR4-210ENST00000485612 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
SSR4-210ENST00000485612 LBX1P52954 281 aa16.94■□□□□ 0.3
SSR4-210ENST00000485612 EYA1Q99502 592 aa16.94■□□□□ 0.3
SSR4-210ENST00000485612 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
SSR4-210ENST00000485612 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
SSR4-210ENST00000485612 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
SSR4-210ENST00000485612 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SSR4-210ENST00000485612 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
SSR4-210ENST00000485612 VEGFBP49765 207 aa16.91■□□□□ 0.3
SSR4-210ENST00000485612 MLLT1Q03111 559 aaPredicted RBP16.91■□□□□ 0.3
SSR4-210ENST00000485612 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SSR4-210ENST00000485612 NFKBIEO00221 500 aa16.9■□□□□ 0.3
SSR4-210ENST00000485612 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
SSR4-210ENST00000485612 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
SSR4-210ENST00000485612 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
SSR4-210ENST00000485612 ZPR1O75312 459 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms