RNA–Protein interactions for RNA: ENST00000485606.1

EXOSC10-209, Transcript of exosome component 10, humanhuman

TSL 3

Gene EXOSC10, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-209ENST00000485606 AK7Q96M32 723 aa24.79■■□□□ 1.56
EXOSC10-209ENST00000485606 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
EXOSC10-209ENST00000485606 DIAPH1O60610 1272 aaKnown RBP24.76■■□□□ 1.55
EXOSC10-209ENST00000485606 ITPK1Q13572 414 aa24.76■■□□□ 1.55
EXOSC10-209ENST00000485606 LINC00116Q8NCU8 138 aa24.76■■□□□ 1.55
EXOSC10-209ENST00000485606 ATP6V1AP38606 617 aa24.75■■□□□ 1.55
EXOSC10-209ENST00000485606 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
EXOSC10-209ENST00000485606 VIRMAQ69YN4 1812 aaKnown RBP24.75■■□□□ 1.55
EXOSC10-209ENST00000485606 CABP4P57796 275 aa24.74■■□□□ 1.55
EXOSC10-209ENST00000485606 AMIGO3Q86WK7 504 aa24.74■■□□□ 1.55
EXOSC10-209ENST00000485606 UTRNP46939 3433 aa24.73■■□□□ 1.55
EXOSC10-209ENST00000485606 HMOX1P09601 288 aa24.73■■□□□ 1.55
EXOSC10-209ENST00000485606 SSFA2P28290 1259 aa24.73■■□□□ 1.55
EXOSC10-209ENST00000485606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.72■■□□□ 1.55
EXOSC10-209ENST00000485606 AKAP4Q5JQC9 854 aa24.72■■□□□ 1.55
EXOSC10-209ENST00000485606 MSL1Q68DK7 614 aa24.72■■□□□ 1.55
EXOSC10-209ENST00000485606 CNGB1Q14028 1251 aaPredicted RBP24.71■■□□□ 1.55
EXOSC10-209ENST00000485606 ADAMTS7Q9UKP4 1686 aa24.71■■□□□ 1.55
EXOSC10-209ENST00000485606 MRC1P22897 1456 aa24.7■■□□□ 1.55
EXOSC10-209ENST00000485606 PHF14O94880 888 aa24.7■■□□□ 1.54
EXOSC10-209ENST00000485606 YY1P25490 414 aa24.7■■□□□ 1.54
EXOSC10-209ENST00000485606 KLHL34Q8N239 644 aa24.7■■□□□ 1.54
EXOSC10-209ENST00000485606 SLC4A9Q96Q91 983 aa24.7■■□□□ 1.54
EXOSC10-209ENST00000485606 CICQ96RK0 1608 aaPredicted RBP24.7■■□□□ 1.54
EXOSC10-209ENST00000485606 GNPATO15228 680 aa24.69■■□□□ 1.54
EXOSC10-209ENST00000485606 RBM42Q9BTD8 480 aaKnown RBP24.69■■□□□ 1.54
EXOSC10-209ENST00000485606 NFATC2IPQ8NCF5 419 aa24.68■■□□□ 1.54
EXOSC10-209ENST00000485606 CHD4Q14839 1912 aa24.67■■□□□ 1.54
EXOSC10-209ENST00000485606 SMIM5Q71RC9 77 aa24.67■■□□□ 1.54
EXOSC10-209ENST00000485606 TJP1Q07157 1748 aa24.66■■□□□ 1.54
EXOSC10-209ENST00000485606 CNTNAP4Q9C0A0 1308 aa24.65■■□□□ 1.54
EXOSC10-209ENST00000485606 MTHFSDQ2M296 383 aaKnown RBP24.65■■□□□ 1.54
EXOSC10-209ENST00000485606 RC3H1Q5TC82 1133 aaKnown RBP24.65■■□□□ 1.54
EXOSC10-209ENST00000485606 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
EXOSC10-209ENST00000485606 NLGN2Q8NFZ4 835 aa24.64■■□□□ 1.54
EXOSC10-209ENST00000485606 SLC52A2Q9HAB3 445 aa24.64■■□□□ 1.54
EXOSC10-209ENST00000485606 GOLGB1Q14789 3259 aaKnown RBP24.64■■□□□ 1.53
EXOSC10-209ENST00000485606 U2SURPO15042 1029 aaKnown RBP24.63■■□□□ 1.53
EXOSC10-209ENST00000485606 RNMTO43148 476 aaKnown RBP24.63■■□□□ 1.53
EXOSC10-209ENST00000485606 RTCBQ9Y3I0 505 aaKnown RBP24.63■■□□□ 1.53
EXOSC10-209ENST00000485606 PTCD1O75127 700 aaKnown RBP24.62■■□□□ 1.53
EXOSC10-209ENST00000485606 CFAP53Q96M91 514 aa24.62■■□□□ 1.53
EXOSC10-209ENST00000485606 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
EXOSC10-209ENST00000485606 ADRA2BP18089 450 aa24.61■■□□□ 1.53
EXOSC10-209ENST00000485606 C4AP0C0L4 1744 aa24.61■■□□□ 1.53
EXOSC10-209ENST00000485606 GPR162Q16538 588 aa24.6■■□□□ 1.53
EXOSC10-209ENST00000485606 CD2APQ9Y5K6 639 aa24.6■■□□□ 1.53
EXOSC10-209ENST00000485606 PPP2R1AP30153 589 aa24.59■■□□□ 1.53
EXOSC10-209ENST00000485606 UBR2Q8IWV8 1755 aa24.58■■□□□ 1.53
EXOSC10-209ENST00000485606 TRAPPC3LQ5T215 181 aa24.58■■□□□ 1.53
EXOSC10-209ENST00000485606 KCPQ6ZWJ8 1503 aa24.57■■□□□ 1.52
EXOSC10-209ENST00000485606 RPS6KA4O75676 772 aa24.57■■□□□ 1.52
EXOSC10-209ENST00000485606 GAS2L2Q8NHY3 880 aa24.57■■□□□ 1.52
EXOSC10-209ENST00000485606 SIPA1L3O60292 1781 aaPredicted RBP24.56■■□□□ 1.52
EXOSC10-209ENST00000485606 CRKLP46109 303 aaKnown RBP24.55■■□□□ 1.52
EXOSC10-209ENST00000485606 ARHGEF1Q92888 912 aaKnown RBP24.55■■□□□ 1.52
EXOSC10-209ENST00000485606 NUDCQ9Y266 331 aa24.55■■□□□ 1.52
EXOSC10-209ENST00000485606 PELP1Q8IZL8 1130 aaKnown RBP24.54■■□□□ 1.52
EXOSC10-209ENST00000485606 KIF13BQ9NQT8 1826 aa24.54■■□□□ 1.52
EXOSC10-209ENST00000485606 GNAT3A8MTJ3 354 aa24.53■■□□□ 1.52
EXOSC10-209ENST00000485606 SLC39A6Q13433 755 aa24.53■■□□□ 1.52
EXOSC10-209ENST00000485606 RSPH6AQ9H0K4 717 aa24.53■■□□□ 1.52
EXOSC10-209ENST00000485606 MMP10P09238 476 aa24.52■■□□□ 1.52
EXOSC10-209ENST00000485606 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
EXOSC10-209ENST00000485606 RFC4P35249 363 aa24.52■■□□□ 1.52
EXOSC10-209ENST00000485606 NLGN1Q8N2Q7 840 aa24.52■■□□□ 1.52
EXOSC10-209ENST00000485606 GYS1P13807 737 aa24.5■■□□□ 1.51
EXOSC10-209ENST00000485606 YBX3P16989 372 aaKnown RBP eCLIP24.5■■□□□ 1.51
EXOSC10-209ENST00000485606 DNAJC10Q8IXB1 793 aa24.5■■□□□ 1.51
EXOSC10-209ENST00000485606 GRIN3BO60391 1043 aa24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 U2AF1L5P0DN76 240 aaPredicted RBP24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 U2AF1Q01081 240 aaKnown RBP eCLIP24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 INTS5Q6P9B9 1019 aaKnown RBP24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 PHACTR3Q96KR7 559 aa24.49■■□□□ 1.51
EXOSC10-209ENST00000485606 TEFQ10587 303 aa24.48■■□□□ 1.51
EXOSC10-209ENST00000485606 VSIG10Q8N0Z9 540 aa24.48■■□□□ 1.51
EXOSC10-209ENST00000485606 CEMIPQ8WUJ3 1361 aa24.48■■□□□ 1.51
EXOSC10-209ENST00000485606 CCDC87Q9NVE4 849 aa24.48■■□□□ 1.51
EXOSC10-209ENST00000485606 USP42Q9H9J4 1324 aaKnown RBP24.47■■□□□ 1.51
EXOSC10-209ENST00000485606 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
EXOSC10-209ENST00000485606 KIAA1551Q9HCM1 1747 aa24.47■■□□□ 1.51
EXOSC10-209ENST00000485606 FCHSD2O94868 740 aa24.46■■□□□ 1.51
EXOSC10-209ENST00000485606 TTC5Q8N0Z6 440 aa24.46■■□□□ 1.51
EXOSC10-209ENST00000485606 C10orf71Q711Q0 1435 aa24.45■■□□□ 1.51
EXOSC10-209ENST00000485606 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.5
EXOSC10-209ENST00000485606 ZNF784Q8NCA9 323 aaPredicted RBP24.45■■□□□ 1.5
EXOSC10-209ENST00000485606 ZNF790Q6PG37 636 aa24.43■■□□□ 1.5
EXOSC10-209ENST00000485606 SRP68Q9UHB9 627 aaKnown RBP24.43■■□□□ 1.5
EXOSC10-209ENST00000485606 PXDNLA1KZ92 1463 aa24.42■■□□□ 1.5
EXOSC10-209ENST00000485606 N4BP2Q86UW6 1770 aaPredicted RBP24.42■■□□□ 1.5
EXOSC10-209ENST00000485606 PARP3Q9Y6F1 533 aa24.41■■□□□ 1.5
EXOSC10-209ENST00000485606 COL15A1P39059 1388 aa24.41■■□□□ 1.5
EXOSC10-209ENST00000485606 HEG1Q9ULI3 1381 aa24.41■■□□□ 1.5
EXOSC10-209ENST00000485606 FKBP8Q14318 412 aa24.4■■□□□ 1.5
EXOSC10-209ENST00000485606 ZNF496Q96IT1 587 aaPredicted RBP24.4■■□□□ 1.5
EXOSC10-209ENST00000485606 ZBTB1Q9Y2K1 713 aa24.4■■□□□ 1.5
EXOSC10-209ENST00000485606 STARD3NLO95772 234 aa24.39■■□□□ 1.49
EXOSC10-209ENST00000485606 TGFB2P61812 414 aa24.39■■□□□ 1.49
EXOSC10-209ENST00000485606 BRCA1P38398 1863 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms