RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
DDX56-212ENST00000485367 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
DDX56-212ENST00000485367 DCAF5Q96JK2 942 aa14.29□□□□□ -0.12
DDX56-212ENST00000485367 ARXQ96QS3 562 aa14.29□□□□□ -0.12
DDX56-212ENST00000485367 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
DDX56-212ENST00000485367 KDRP35968 1356 aa14.29□□□□□ -0.12
DDX56-212ENST00000485367 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
DDX56-212ENST00000485367 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 ERVV-2B6SEH9 535 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 HMOX1P09601 288 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 SIK1P57059 783 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
DDX56-212ENST00000485367 FHDC1Q9C0D6 1143 aaPredicted RBP14.28□□□□□ -0.12
DDX56-212ENST00000485367 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
DDX56-212ENST00000485367 POLD1P28340 1107 aa14.27□□□□□ -0.12
DDX56-212ENST00000485367 CABP4P57796 275 aa14.27□□□□□ -0.13
DDX56-212ENST00000485367 AK7Q96M32 723 aa14.27□□□□□ -0.13
DDX56-212ENST00000485367 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
DDX56-212ENST00000485367 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
DDX56-212ENST00000485367 ATP6V1AP38606 617 aa14.26□□□□□ -0.13
DDX56-212ENST00000485367 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
DDX56-212ENST00000485367 LINC00116Q8NCU8 138 aa14.25□□□□□ -0.13
DDX56-212ENST00000485367 ITPK1Q13572 414 aa14.24□□□□□ -0.13
DDX56-212ENST00000485367 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
DDX56-212ENST00000485367 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
DDX56-212ENST00000485367 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
DDX56-212ENST00000485367 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
DDX56-212ENST00000485367 MSL1Q68DK7 614 aa14.24□□□□□ -0.13
DDX56-212ENST00000485367 COL24A1Q17RW2 1714 aa14.23□□□□□ -0.13
DDX56-212ENST00000485367 PHF14O94880 888 aa14.23□□□□□ -0.13
DDX56-212ENST00000485367 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
DDX56-212ENST00000485367 SMIM5Q71RC9 77 aa14.23□□□□□ -0.13
DDX56-212ENST00000485367 NFATC2IPQ8NCF5 419 aa14.23□□□□□ -0.13
DDX56-212ENST00000485367 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
DDX56-212ENST00000485367 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
DDX56-212ENST00000485367 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
DDX56-212ENST00000485367 SCN11AQ9UI33 1791 aa14.22□□□□□ -0.13
DDX56-212ENST00000485367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.22□□□□□ -0.13
DDX56-212ENST00000485367 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
DDX56-212ENST00000485367 GNPATO15228 680 aa14.21□□□□□ -0.13
DDX56-212ENST00000485367 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
DDX56-212ENST00000485367 SLC4A9Q96Q91 983 aa14.21□□□□□ -0.13
DDX56-212ENST00000485367 PTCD1O75127 700 aaKnown RBP14.2□□□□□ -0.14
DDX56-212ENST00000485367 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
DDX56-212ENST00000485367 MAP3K5Q99683 1374 aa14.2□□□□□ -0.14
DDX56-212ENST00000485367 SSFA2P28290 1259 aa14.19□□□□□ -0.14
DDX56-212ENST00000485367 PPP2R1AP30153 589 aa14.19□□□□□ -0.14
DDX56-212ENST00000485367 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
DDX56-212ENST00000485367 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
DDX56-212ENST00000485367 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
DDX56-212ENST00000485367 ZNF831Q5JPB2 1677 aa14.18□□□□□ -0.14
DDX56-212ENST00000485367 YY1P25490 414 aa14.17□□□□□ -0.14
DDX56-212ENST00000485367 COL5A3P25940 1745 aaPredicted RBP14.17□□□□□ -0.14
DDX56-212ENST00000485367 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
DDX56-212ENST00000485367 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
DDX56-212ENST00000485367 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
DDX56-212ENST00000485367 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
DDX56-212ENST00000485367 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
DDX56-212ENST00000485367 GPR162Q16538 588 aa14.15□□□□□ -0.14
DDX56-212ENST00000485367 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
DDX56-212ENST00000485367 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
DDX56-212ENST00000485367 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
DDX56-212ENST00000485367 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
DDX56-212ENST00000485367 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 MYH14Q7Z406 1995 aaKnown RBP14.14□□□□□ -0.15
DDX56-212ENST00000485367 MRC1P22897 1456 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 PHACTR3Q96KR7 559 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
DDX56-212ENST00000485367 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
DDX56-212ENST00000485367 ARHGEF1Q92888 912 aaKnown RBP14.13□□□□□ -0.15
DDX56-212ENST00000485367 ADAMTS7Q9UKP4 1686 aa14.13□□□□□ -0.15
DDX56-212ENST00000485367 TJP1Q07157 1748 aa14.13□□□□□ -0.15
DDX56-212ENST00000485367 ADRA2BP18089 450 aa14.12□□□□□ -0.15
DDX56-212ENST00000485367 RFC4P35249 363 aa14.12□□□□□ -0.15
DDX56-212ENST00000485367 CRKLP46109 303 aaKnown RBP14.12□□□□□ -0.15
DDX56-212ENST00000485367 DNAJC10Q8IXB1 793 aa14.12□□□□□ -0.15
DDX56-212ENST00000485367 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
DDX56-212ENST00000485367 TEFQ10587 303 aa14.11□□□□□ -0.15
DDX56-212ENST00000485367 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
DDX56-212ENST00000485367 MMP10P09238 476 aa14.11□□□□□ -0.15
DDX56-212ENST00000485367 NLGN1Q8N2Q7 840 aa14.1□□□□□ -0.15
DDX56-212ENST00000485367 CHD4Q14839 1912 aa14.1□□□□□ -0.15
DDX56-212ENST00000485367 KCPQ6ZWJ8 1503 aa14.1□□□□□ -0.15
DDX56-212ENST00000485367 FCHSD2O94868 740 aa14.09□□□□□ -0.15
DDX56-212ENST00000485367 INTS5Q6P9B9 1019 aaKnown RBP14.09□□□□□ -0.15
DDX56-212ENST00000485367 TTC5Q8N0Z6 440 aa14.09□□□□□ -0.15
DDX56-212ENST00000485367 CICQ96RK0 1608 aaPredicted RBP14.09□□□□□ -0.15
DDX56-212ENST00000485367 CCDC87Q9NVE4 849 aa14.09□□□□□ -0.15
DDX56-212ENST00000485367 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
DDX56-212ENST00000485367 C4AP0C0L4 1744 aa14.08□□□□□ -0.16
DDX56-212ENST00000485367 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.16
DDX56-212ENST00000485367 GYS1P13807 737 aa14.08□□□□□ -0.16
DDX56-212ENST00000485367 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX56-212ENST00000485367 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
DDX56-212ENST00000485367 SIPA1L3O60292 1781 aaPredicted RBP14.07□□□□□ -0.16
DDX56-212ENST00000485367 UBR2Q8IWV8 1755 aa14.07□□□□□ -0.16
DDX56-212ENST00000485367 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms