RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 IGHDP01880 384 aa23.48■■□□□ 1.35
NECTIN3-206ENST00000485303 AIMP1Q12904 312 aaKnown RBP23.48■■□□□ 1.35
NECTIN3-206ENST00000485303 NGLY1Q96IV0 654 aa23.47■■□□□ 1.35
NECTIN3-206ENST00000485303 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
NECTIN3-206ENST00000485303 RWDD1Q9H446 243 aaPredicted RBP23.47■■□□□ 1.35
NECTIN3-206ENST00000485303 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
NECTIN3-206ENST00000485303 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
NECTIN3-206ENST00000485303 MEGF6O75095 1541 aa23.45■■□□□ 1.35
NECTIN3-206ENST00000485303 CARD10Q9BWT7 1032 aa23.45■■□□□ 1.34
NECTIN3-206ENST00000485303 APBB1O00213 710 aa23.45■■□□□ 1.34
NECTIN3-206ENST00000485303 HSP90AB1P08238 724 aaKnown RBP23.45■■□□□ 1.34
NECTIN3-206ENST00000485303 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 MEX3CQ5U5Q3 659 aaKnown RBP23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 FLIIQ13045 1269 aa23.44■■□□□ 1.34
NECTIN3-206ENST00000485303 MYL6BP14649 208 aa23.43■■□□□ 1.34
NECTIN3-206ENST00000485303 DCAF5Q96JK2 942 aa23.43■■□□□ 1.34
NECTIN3-206ENST00000485303 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
NECTIN3-206ENST00000485303 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
NECTIN3-206ENST00000485303 SLC52A2Q9HAB3 445 aa23.42■■□□□ 1.34
NECTIN3-206ENST00000485303 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
NECTIN3-206ENST00000485303 ZBTB47Q9UFB7 747 aaPredicted RBP23.41■■□□□ 1.34
NECTIN3-206ENST00000485303 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
NECTIN3-206ENST00000485303 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
NECTIN3-206ENST00000485303 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
NECTIN3-206ENST00000485303 CHMP4BQ9H444 224 aaKnown RBP23.4■■□□□ 1.34
NECTIN3-206ENST00000485303 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
NECTIN3-206ENST00000485303 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.34
NECTIN3-206ENST00000485303 PHRF1Q9P1Y6 1649 aaKnown RBP23.39■■□□□ 1.33
NECTIN3-206ENST00000485303 EXOC5O00471 708 aa23.39■■□□□ 1.33
NECTIN3-206ENST00000485303 COL5A2P05997 1499 aaPredicted RBP23.38■■□□□ 1.33
NECTIN3-206ENST00000485303 USP54Q70EL1 1684 aa23.38■■□□□ 1.33
NECTIN3-206ENST00000485303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.38■■□□□ 1.333e-7■■□□□ 11.7
NECTIN3-206ENST00000485303 ZNF496Q96IT1 587 aaPredicted RBP23.37■■□□□ 1.33
NECTIN3-206ENST00000485303 CEMIPQ8WUJ3 1361 aa23.37■■□□□ 1.33
NECTIN3-206ENST00000485303 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
NECTIN3-206ENST00000485303 CERKQ8TCT0 537 aa23.37■■□□□ 1.33
NECTIN3-206ENST00000485303 LTBP4Q8N2S1 1624 aa23.36■■□□□ 1.33
NECTIN3-206ENST00000485303 TMOD3Q9NYL9 352 aa23.36■■□□□ 1.33
NECTIN3-206ENST00000485303 BABAM1Q9NWV8 329 aa23.35■■□□□ 1.33
NECTIN3-206ENST00000485303 PTPRCP08575 1304 aa23.35■■□□□ 1.33
NECTIN3-206ENST00000485303 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
NECTIN3-206ENST00000485303 MEIS3Q99687 375 aa23.34■■□□□ 1.33
NECTIN3-206ENST00000485303 RBM19Q9Y4C8 960 aaKnown RBP23.34■■□□□ 1.33
NECTIN3-206ENST00000485303 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
NECTIN3-206ENST00000485303 GIGYF1O75420 1035 aaPredicted RBP23.34■■□□□ 1.33
NECTIN3-206ENST00000485303 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
NECTIN3-206ENST00000485303 PI4KAP2A4QPH2 592 aa23.33■■□□□ 1.33
NECTIN3-206ENST00000485303 PI4KAP1Q8N8J0 262 aa23.33■■□□□ 1.33
NECTIN3-206ENST00000485303 ACSBG1Q96GR2 724 aa23.33■■□□□ 1.33
NECTIN3-206ENST00000485303 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
NECTIN3-206ENST00000485303 PDZRN3Q9UPQ7 1066 aa23.32■■□□□ 1.32
NECTIN3-206ENST00000485303 ZBTB7BO15156 539 aaPredicted RBP23.32■■□□□ 1.32
NECTIN3-206ENST00000485303 PROSER3Q2NL68 480 aa23.32■■□□□ 1.32
NECTIN3-206ENST00000485303 AAMPQ13685 434 aa23.31■■□□□ 1.32
NECTIN3-206ENST00000485303 ABCC4O15439 1325 aa23.31■■□□□ 1.32
NECTIN3-206ENST00000485303 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
NECTIN3-206ENST00000485303 BRPF1P55201 1214 aaPredicted RBP23.31■■□□□ 1.32
NECTIN3-206ENST00000485303 DDB1Q16531 1140 aa23.31■■□□□ 1.32
NECTIN3-206ENST00000485303 ANKRD45Q5TZF3 282 aa23.3■■□□□ 1.32
NECTIN3-206ENST00000485303 RIC3Q7Z5B4 369 aa23.3■■□□□ 1.32
NECTIN3-206ENST00000485303 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
NECTIN3-206ENST00000485303 FAM98CQ17RN3 349 aaKnown RBP23.3■■□□□ 1.32
NECTIN3-206ENST00000485303 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
NECTIN3-206ENST00000485303 CCT4P50991 539 aaKnown RBP23.29■■□□□ 1.32
NECTIN3-206ENST00000485303 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
NECTIN3-206ENST00000485303 NCAPD2Q15021 1401 aa23.29■■□□□ 1.32
NECTIN3-206ENST00000485303 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
NECTIN3-206ENST00000485303 SRCIN1Q9C0H9 1055 aa23.27■■□□□ 1.32
NECTIN3-206ENST00000485303 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 HSPA1LP34931 641 aa23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 C9orf78Q9NZ63 289 aaPredicted RBP23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 MAP3K2Q9Y2U5 619 aa23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
NECTIN3-206ENST00000485303 NHSL1Q5SYE7 1610 aa23.25■■□□□ 1.31
NECTIN3-206ENST00000485303 UBTFL1P0CB47 393 aaPredicted RBP23.25■■□□□ 1.31
NECTIN3-206ENST00000485303 INTS3Q68E01 1043 aaKnown RBP23.25■■□□□ 1.31
NECTIN3-206ENST00000485303 XAGE3Q8WTP9 111 aa23.24■■□□□ 1.31
NECTIN3-206ENST00000485303 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
NECTIN3-206ENST00000485303 COPS6Q7L5N1 327 aa23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 ASAP1Q9ULH1 1129 aa23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 HOXB7P09629 217 aa23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 PDE4AP27815 886 aa23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 USP21Q9UK80 565 aa23.23■■□□□ 1.31
NECTIN3-206ENST00000485303 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
NECTIN3-206ENST00000485303 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
NECTIN3-206ENST00000485303 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
NECTIN3-206ENST00000485303 COL18A1P39060 1754 aa23.22■■□□□ 1.31
NECTIN3-206ENST00000485303 GNAI2P04899 355 aa23.22■■□□□ 1.31
NECTIN3-206ENST00000485303 A1BGP04217 495 aa23.21■■□□□ 1.31
NECTIN3-206ENST00000485303 NEXNQ0ZGT2 675 aa23.21■■□□□ 1.31
NECTIN3-206ENST00000485303 LRRFIP2Q9Y608 721 aaKnown RBP23.21■■□□□ 1.31
NECTIN3-206ENST00000485303 JCADQ9P266 1359 aa23.2■■□□□ 1.31
NECTIN3-206ENST00000485303 GNAI3P08754 354 aa23.2■■□□□ 1.31
NECTIN3-206ENST00000485303 CWF19L2Q2TBE0 894 aaKnown RBP23.2■■□□□ 1.31
NECTIN3-206ENST00000485303 FAM182BQ5T319 152 aa23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms