RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 GNPATO15228 680 aa19.03■□□□□ 0.64
NUP188-206ENST00000485158 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
NUP188-206ENST00000485158 ATP6V1AP38606 617 aa19.03■□□□□ 0.64
NUP188-206ENST00000485158 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
NUP188-206ENST00000485158 KIF3CO14782 793 aa19.01■□□□□ 0.63
NUP188-206ENST00000485158 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
NUP188-206ENST00000485158 ERVV-2B6SEH9 535 aa19■□□□□ 0.63
NUP188-206ENST00000485158 MMP10P09238 476 aa19■□□□□ 0.63
NUP188-206ENST00000485158 TGFB2P61812 414 aa19■□□□□ 0.63
NUP188-206ENST00000485158 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
NUP188-206ENST00000485158 ADRA2BP18089 450 aa18.99■□□□□ 0.63
NUP188-206ENST00000485158 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
NUP188-206ENST00000485158 RC3H1Q5TC82 1133 aaKnown RBP18.99■□□□□ 0.63
NUP188-206ENST00000485158 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
NUP188-206ENST00000485158 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
NUP188-206ENST00000485158 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
NUP188-206ENST00000485158 TRAPPC3LQ5T215 181 aa18.98■□□□□ 0.63
NUP188-206ENST00000485158 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
NUP188-206ENST00000485158 DCAF5Q96JK2 942 aa18.97■□□□□ 0.63
NUP188-206ENST00000485158 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
NUP188-206ENST00000485158 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
NUP188-206ENST00000485158 WWC3Q9ULE0 1092 aa18.96■□□□□ 0.63
NUP188-206ENST00000485158 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
NUP188-206ENST00000485158 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
NUP188-206ENST00000485158 RPS6KA4O75676 772 aa18.94■□□□□ 0.62
NUP188-206ENST00000485158 GYS1P13807 737 aa18.94■□□□□ 0.62
NUP188-206ENST00000485158 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
NUP188-206ENST00000485158 KDM6AO15550 1401 aaPredicted RBP18.93■□□□□ 0.62
NUP188-206ENST00000485158 C4AP0C0L4 1744 aa18.93■□□□□ 0.62
NUP188-206ENST00000485158 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
NUP188-206ENST00000485158 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
NUP188-206ENST00000485158 A0A0G2JLW4 131 aa18.91■□□□□ 0.62
NUP188-206ENST00000485158 TOMM70O94826 608 aa18.91■□□□□ 0.62
NUP188-206ENST00000485158 AMOTQ4VCS5 1084 aa18.91■□□□□ 0.62
NUP188-206ENST00000485158 PLEKHO1Q53GL0 409 aaPredicted RBP18.91■□□□□ 0.62
NUP188-206ENST00000485158 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
NUP188-206ENST00000485158 MYH14Q7Z406 1995 aaKnown RBP18.91■□□□□ 0.62
NUP188-206ENST00000485158 KCNA3P22001 575 aa18.9■□□□□ 0.62
NUP188-206ENST00000485158 APLP1P51693 650 aa18.9■□□□□ 0.62
NUP188-206ENST00000485158 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
NUP188-206ENST00000485158 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
NUP188-206ENST00000485158 DPEP1P16444 411 aa18.89■□□□□ 0.61
NUP188-206ENST00000485158 RFC4P35249 363 aa18.89■□□□□ 0.61
NUP188-206ENST00000485158 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
NUP188-206ENST00000485158 PARP3Q9Y6F1 533 aa18.88■□□□□ 0.61
NUP188-206ENST00000485158 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
NUP188-206ENST00000485158 CABP4P57796 275 aa18.87■□□□□ 0.61
NUP188-206ENST00000485158 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
NUP188-206ENST00000485158 ARFGEF1Q9Y6D6 1849 aa18.87■□□□□ 0.61
NUP188-206ENST00000485158 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
NUP188-206ENST00000485158 ZNF530Q6P9A1 599 aaPredicted RBP18.86■□□□□ 0.61
NUP188-206ENST00000485158 ARHGAP27Q6ZUM4 889 aa18.86■□□□□ 0.61
NUP188-206ENST00000485158 FCHSD2O94868 740 aa18.85■□□□□ 0.61
NUP188-206ENST00000485158 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
NUP188-206ENST00000485158 MTHFSP49914 203 aa18.85■□□□□ 0.61
NUP188-206ENST00000485158 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
NUP188-206ENST00000485158 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
NUP188-206ENST00000485158 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
NUP188-206ENST00000485158 PANK3Q9H999 370 aa18.83■□□□□ 0.6
NUP188-206ENST00000485158 NMRK2Q9NPI5 230 aa18.83■□□□□ 0.6
NUP188-206ENST00000485158 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
NUP188-206ENST00000485158 PTCD1O75127 700 aaKnown RBP18.82■□□□□ 0.6
NUP188-206ENST00000485158 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
NUP188-206ENST00000485158 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
NUP188-206ENST00000485158 RBM46Q8TBY0 533 aaKnown RBP18.82■□□□□ 0.6
NUP188-206ENST00000485158 TJP1Q07157 1748 aa18.82■□□□□ 0.6
NUP188-206ENST00000485158 DDR1Q08345 913 aa18.81■□□□□ 0.6
NUP188-206ENST00000485158 FKBP8Q14318 412 aa18.81■□□□□ 0.6
NUP188-206ENST00000485158 C9orf131Q5VYM1 1079 aa18.81■□□□□ 0.6
NUP188-206ENST00000485158 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
NUP188-206ENST00000485158 TM4SF1P30408 202 aa18.8■□□□□ 0.6
NUP188-206ENST00000485158 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
NUP188-206ENST00000485158 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
NUP188-206ENST00000485158 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
NUP188-206ENST00000485158 POLRMTO00411 1230 aaKnown RBP18.79■□□□□ 0.6
NUP188-206ENST00000485158 IL13P35225 146 aa18.79■□□□□ 0.6
NUP188-206ENST00000485158 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
NUP188-206ENST00000485158 FSTL1Q12841 308 aa18.78■□□□□ 0.6
NUP188-206ENST00000485158 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
NUP188-206ENST00000485158 MORC1Q86VD1 984 aa18.77■□□□□ 0.6
NUP188-206ENST00000485158 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.6
NUP188-206ENST00000485158 WDR90Q96KV7 1748 aa18.77■□□□□ 0.59
NUP188-206ENST00000485158 MRC1P22897 1456 aa18.77■□□□□ 0.59
NUP188-206ENST00000485158 KDM2BQ8NHM5 1336 aa18.76■□□□□ 0.59
NUP188-206ENST00000485158 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
NUP188-206ENST00000485158 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
NUP188-206ENST00000485158 ZC3H4Q9UPT8 1303 aaKnown RBP18.75■□□□□ 0.59
NUP188-206ENST00000485158 SBF1O95248 1867 aa18.75■□□□□ 0.59
NUP188-206ENST00000485158 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
NUP188-206ENST00000485158 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
NUP188-206ENST00000485158 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
NUP188-206ENST00000485158 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
NUP188-206ENST00000485158 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
NUP188-206ENST00000485158 CHRNA5P30532 468 aa18.74■□□□□ 0.59
NUP188-206ENST00000485158 ZPR1O75312 459 aa18.73■□□□□ 0.59
NUP188-206ENST00000485158 CYP19A1P11511 503 aaPredicted RBP18.73■□□□□ 0.59
NUP188-206ENST00000485158 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
NUP188-206ENST00000485158 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
NUP188-206ENST00000485158 RNF181Q9P0P0 153 aa18.73■□□□□ 0.59
NUP188-206ENST00000485158 NARFQ9UHQ1 456 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms