RNA–Protein interactions for RNA: ENST00000485096.5

NCK1-209, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-209ENST00000485096 SPG7Q9UQ90 795 aa22.94■■□□□ 1.26
NCK1-209ENST00000485096 TOMM70O94826 608 aa22.93■■□□□ 1.26
NCK1-209ENST00000485096 ARHGAP27Q6ZUM4 889 aa22.93■■□□□ 1.26
NCK1-209ENST00000485096 CARD14Q9BXL6 1004 aa22.93■■□□□ 1.26
NCK1-209ENST00000485096 ATG3Q9NT62 314 aa22.93■■□□□ 1.26
NCK1-209ENST00000485096 KIF13BQ9NQT8 1826 aa22.93■■□□□ 1.26
NCK1-209ENST00000485096 KDRP35968 1356 aa22.92■■□□□ 1.26
NCK1-209ENST00000485096 DPEP1P16444 411 aa22.92■■□□□ 1.26
NCK1-209ENST00000485096 TMF1P82094 1093 aa22.92■■□□□ 1.26
NCK1-209ENST00000485096 SLC4A9Q96Q91 983 aa22.92■■□□□ 1.26
NCK1-209ENST00000485096 PHKG2P15735 406 aa22.91■■□□□ 1.26
NCK1-209ENST00000485096 EYA1Q99502 592 aa22.91■■□□□ 1.26
NCK1-209ENST00000485096 FCHSD2O94868 740 aa22.89■■□□□ 1.25
NCK1-209ENST00000485096 WDR90Q96KV7 1748 aa22.88■■□□□ 1.25
NCK1-209ENST00000485096 ANKRD26Q9UPS8 1709 aa22.88■■□□□ 1.25
NCK1-209ENST00000485096 TGFB2P61812 414 aa22.88■■□□□ 1.25
NCK1-209ENST00000485096 C4AP0C0L4 1744 aa22.88■■□□□ 1.25
NCK1-209ENST00000485096 TRAPPC3LQ5T215 181 aa22.87■■□□□ 1.25
NCK1-209ENST00000485096 ARHGEF1Q92888 912 aaKnown RBP22.87■■□□□ 1.25
NCK1-209ENST00000485096 RBM42Q9BTD8 480 aaKnown RBP22.87■■□□□ 1.25
NCK1-209ENST00000485096 RTCBQ9Y3I0 505 aaKnown RBP22.87■■□□□ 1.25
NCK1-209ENST00000485096 C9orf131Q5VYM1 1079 aa22.86■■□□□ 1.25
NCK1-209ENST00000485096 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
NCK1-209ENST00000485096 GYS1P13807 737 aa22.85■■□□□ 1.25
NCK1-209ENST00000485096 COL13A1Q5TAT6 717 aaPredicted RBP22.85■■□□□ 1.25
NCK1-209ENST00000485096 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
NCK1-209ENST00000485096 KCPQ6ZWJ8 1503 aa22.85■■□□□ 1.25
NCK1-209ENST00000485096 WASHC2AQ641Q2 1341 aa22.84■■□□□ 1.25
NCK1-209ENST00000485096 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
NCK1-209ENST00000485096 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
NCK1-209ENST00000485096 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.25
NCK1-209ENST00000485096 CAPN15O75808 1086 aa22.83■■□□□ 1.25
NCK1-209ENST00000485096 KCNA3P22001 575 aa22.83■■□□□ 1.25
NCK1-209ENST00000485096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.257e-7■■■■□ 26.2
NCK1-209ENST00000485096 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
NCK1-209ENST00000485096 RBM46Q8TBY0 533 aaKnown RBP22.81■■□□□ 1.24
NCK1-209ENST00000485096 PARP3Q9Y6F1 533 aa22.81■■□□□ 1.24
NCK1-209ENST00000485096 RFC4P35249 363 aa22.8■■□□□ 1.24
NCK1-209ENST00000485096 TNNT2P45379 298 aaPredicted RBP22.8■■□□□ 1.24
NCK1-209ENST00000485096 EIF4A2Q14240 407 aaKnown RBP22.8■■□□□ 1.24
NCK1-209ENST00000485096 KLRG1Q96E93 195 aa22.8■■□□□ 1.24
NCK1-209ENST00000485096 POLKQ9UBT6 870 aa22.8■■□□□ 1.24
NCK1-209ENST00000485096 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
NCK1-209ENST00000485096 C16orf71Q8IYS4 520 aaPredicted RBP22.79■■□□□ 1.24
NCK1-209ENST00000485096 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
NCK1-209ENST00000485096 CNTNAP4Q9C0A0 1308 aa22.79■■□□□ 1.24
NCK1-209ENST00000485096 RPS6KA4O75676 772 aa22.78■■□□□ 1.24
NCK1-209ENST00000485096 RNF181Q9P0P0 153 aa22.78■■□□□ 1.24
NCK1-209ENST00000485096 PLEKHG2Q9H7P9 1386 aa22.77■■□□□ 1.24
NCK1-209ENST00000485096 PCNTO95613 3336 aa22.77■■□□□ 1.24
NCK1-209ENST00000485096 ADRA2BP18089 450 aa22.77■■□□□ 1.24
NCK1-209ENST00000485096 CHRNA5P30532 468 aa22.77■■□□□ 1.24
NCK1-209ENST00000485096 DDR1Q08345 913 aa22.77■■□□□ 1.24
NCK1-209ENST00000485096 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
NCK1-209ENST00000485096 FKBP8Q14318 412 aa22.76■■□□□ 1.23
NCK1-209ENST00000485096 RC3H1Q5TC82 1133 aaKnown RBP22.76■■□□□ 1.23
NCK1-209ENST00000485096 DCAF5Q96JK2 942 aa22.76■■□□□ 1.23
NCK1-209ENST00000485096 RRAGCQ9HB90 399 aa22.76■■□□□ 1.23
NCK1-209ENST00000485096 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
NCK1-209ENST00000485096 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
NCK1-209ENST00000485096 PTCD1O75127 700 aaKnown RBP22.75■■□□□ 1.23
NCK1-209ENST00000485096 JMYQ8N9B5 988 aa22.75■■□□□ 1.23
NCK1-209ENST00000485096 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
NCK1-209ENST00000485096 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
NCK1-209ENST00000485096 DALRD3Q5D0E6 543 aaKnown RBP22.74■■□□□ 1.23
NCK1-209ENST00000485096 ERVV-2B6SEH9 535 aa22.73■■□□□ 1.23
NCK1-209ENST00000485096 CRKLP46109 303 aaKnown RBP22.73■■□□□ 1.23
NCK1-209ENST00000485096 RASSF7Q02833 373 aa22.72■■□□□ 1.23
NCK1-209ENST00000485096 FSTL1Q12841 308 aa22.72■■□□□ 1.23
NCK1-209ENST00000485096 ZNF530Q6P9A1 599 aaPredicted RBP22.72■■□□□ 1.23
NCK1-209ENST00000485096 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
NCK1-209ENST00000485096 CABP4P57796 275 aa22.71■■□□□ 1.23
NCK1-209ENST00000485096 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
NCK1-209ENST00000485096 TJP1Q07157 1748 aa22.7■■□□□ 1.22
NCK1-209ENST00000485096 AEBP1Q8IUX7 1158 aa22.69■■□□□ 1.22
NCK1-209ENST00000485096 TNS4Q8IZW8 715 aa22.69■■□□□ 1.22
NCK1-209ENST00000485096 POLR3GLQ9BT43 218 aa22.69■■□□□ 1.22
NCK1-209ENST00000485096 TNRC6CQ9HCJ0 1690 aaKnown RBP22.68■■□□□ 1.22
NCK1-209ENST00000485096 POLRMTO00411 1230 aaKnown RBP22.67■■□□□ 1.22
NCK1-209ENST00000485096 PRELPP51888 382 aa22.67■■□□□ 1.22
NCK1-209ENST00000485096 ADAMTS7Q9UKP4 1686 aa22.66■■□□□ 1.22
NCK1-209ENST00000485096 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
NCK1-209ENST00000485096 PLEKHO1Q53GL0 409 aaPredicted RBP22.66■■□□□ 1.22
NCK1-209ENST00000485096 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
NCK1-209ENST00000485096 SMC1BQ8NDV3 1235 aa22.65■■□□□ 1.22
NCK1-209ENST00000485096 MTHFSP49914 203 aa22.64■■□□□ 1.21
NCK1-209ENST00000485096 INTS5Q6P9B9 1019 aaKnown RBP22.64■■□□□ 1.21
NCK1-209ENST00000485096 SBF1O95248 1867 aa22.64■■□□□ 1.21
NCK1-209ENST00000485096 USPL1Q5W0Q7 1092 aa22.63■■□□□ 1.21
NCK1-209ENST00000485096 TM4SF1P30408 202 aa22.61■■□□□ 1.21
NCK1-209ENST00000485096 DNAJC10Q8IXB1 793 aa22.61■■□□□ 1.21
NCK1-209ENST00000485096 HSPA1AP0DMV8 641 aaKnown RBP22.6■■□□□ 1.21
NCK1-209ENST00000485096 HSPA1BP0DMV9 641 aaKnown RBP22.6■■□□□ 1.21
NCK1-209ENST00000485096 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
NCK1-209ENST00000485096 AMOTQ4VCS5 1084 aa22.59■■□□□ 1.21
NCK1-209ENST00000485096 NFIXQ14938 502 aa22.58■■□□□ 1.21
NCK1-209ENST00000485096 CARMIL3Q8ND23 1372 aa22.58■■□□□ 1.21
NCK1-209ENST00000485096 SOS1Q07889 1333 aaPredicted RBP22.57■■□□□ 1.2
NCK1-209ENST00000485096 TIAM2Q8IVF5 1701 aa22.57■■□□□ 1.2
NCK1-209ENST00000485096 ZPR1O75312 459 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms