RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 C1orf141Q5JVX7 400 aa26.11■■□□□ 1.77
NDUFA3-213ENST00000484103 COL24A1Q17RW2 1714 aa26.11■■□□□ 1.77
NDUFA3-213ENST00000484103 GNPATO15228 680 aa26.1■■□□□ 1.77
NDUFA3-213ENST00000484103 IL13P35225 146 aa26.1■■□□□ 1.77
NDUFA3-213ENST00000484103 KDM6AO15550 1401 aaPredicted RBP26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 HSP90AB1P08238 724 aaKnown RBP26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 HMOX1P09601 288 aa26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 CABP4P57796 275 aa26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 AMOTQ4VCS5 1084 aa26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 FLAD1Q8NFF5 587 aa26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 DCAF5Q96JK2 942 aa26.09■■□□□ 1.77
NDUFA3-213ENST00000484103 UBR3Q6ZT12 1888 aa26.06■■□□□ 1.76
NDUFA3-213ENST00000484103 ERVV-2B6SEH9 535 aa26.06■■□□□ 1.76
NDUFA3-213ENST00000484103 PER1O15534 1290 aaPredicted RBP26.05■■□□□ 1.76
NDUFA3-213ENST00000484103 WWC3Q9ULE0 1092 aa26.05■■□□□ 1.76
NDUFA3-213ENST00000484103 PTCD1O75127 700 aaKnown RBP26.04■■□□□ 1.76
NDUFA3-213ENST00000484103 HMGB2P26583 209 aaKnown RBP26.04■■□□□ 1.76
NDUFA3-213ENST00000484103 GOLGB1Q14789 3259 aaKnown RBP26.03■■□□□ 1.76
NDUFA3-213ENST00000484103 SLC4A9Q96Q91 983 aa26.03■■□□□ 1.76
NDUFA3-213ENST00000484103 SSFA2P28290 1259 aa26.02■■□□□ 1.76
NDUFA3-213ENST00000484103 NFATC2IPQ8NCF5 419 aa26.02■■□□□ 1.76
NDUFA3-213ENST00000484103 PLEKHG2Q9H7P9 1386 aa26.02■■□□□ 1.76
NDUFA3-213ENST00000484103 KDRP35968 1356 aa26.01■■□□□ 1.75
NDUFA3-213ENST00000484103 DIAPH1O60610 1272 aaKnown RBP26■■□□□ 1.75
NDUFA3-213ENST00000484103 YBX3P16989 372 aaKnown RBP eCLIP25.98■■□□□ 1.751e-10■■■■□ 22.9
NDUFA3-213ENST00000484103 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
NDUFA3-213ENST00000484103 U2SURPO15042 1029 aaKnown RBP25.97■■□□□ 1.75
NDUFA3-213ENST00000484103 RTCBQ9Y3I0 505 aaKnown RBP25.97■■□□□ 1.75
NDUFA3-213ENST00000484103 LGR6Q9HBX8 967 aa25.96■■□□□ 1.75
NDUFA3-213ENST00000484103 CHD4Q14839 1912 aa25.95■■□□□ 1.74
NDUFA3-213ENST00000484103 AKAP4Q5JQC9 854 aa25.95■■□□□ 1.74
NDUFA3-213ENST00000484103 TRAPPC3LQ5T215 181 aa25.94■■□□□ 1.74
NDUFA3-213ENST00000484103 MTHFSDQ2M296 383 aaKnown RBP25.93■■□□□ 1.74
NDUFA3-213ENST00000484103 CD2APQ9Y5K6 639 aa25.93■■□□□ 1.74
NDUFA3-213ENST00000484103 SCN11AQ9UI33 1791 aa25.92■■□□□ 1.74
NDUFA3-213ENST00000484103 COL5A3P25940 1745 aaPredicted RBP25.92■■□□□ 1.74
NDUFA3-213ENST00000484103 MMP10P09238 476 aa25.92■■□□□ 1.74
NDUFA3-213ENST00000484103 SLC39A6Q13433 755 aa25.91■■□□□ 1.74
NDUFA3-213ENST00000484103 ARHGEF1Q92888 912 aaKnown RBP25.91■■□□□ 1.74
NDUFA3-213ENST00000484103 RNMTO43148 476 aaKnown RBP25.9■■□□□ 1.74
NDUFA3-213ENST00000484103 RFC4P35249 363 aa25.9■■□□□ 1.74
NDUFA3-213ENST00000484103 SLC52A2Q9HAB3 445 aa25.9■■□□□ 1.74
NDUFA3-213ENST00000484103 CNTNAP4Q9C0A0 1308 aa25.89■■□□□ 1.74
NDUFA3-213ENST00000484103 CRKLP46109 303 aaKnown RBP25.89■■□□□ 1.74
NDUFA3-213ENST00000484103 COL3A1P02461 1466 aaPredicted RBP25.88■■□□□ 1.73
NDUFA3-213ENST00000484103 RPS6KA4O75676 772 aa25.87■■□□□ 1.73
NDUFA3-213ENST00000484103 ZNF831Q5JPB2 1677 aa25.87■■□□□ 1.73
NDUFA3-213ENST00000484103 TJP1Q07157 1748 aa25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 NPC1L1Q9UHC9 1359 aa25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 CICQ96RK0 1608 aaPredicted RBP25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 GRIN3BO60391 1043 aa25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 RC3H1Q5TC82 1133 aaKnown RBP25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 DNAJC10Q8IXB1 793 aa25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 SRP68Q9UHB9 627 aaKnown RBP25.86■■□□□ 1.73
NDUFA3-213ENST00000484103 VIRMAQ69YN4 1812 aaKnown RBP25.85■■□□□ 1.73
NDUFA3-213ENST00000484103 MYH14Q7Z406 1995 aaKnown RBP25.85■■□□□ 1.73
NDUFA3-213ENST00000484103 C4AP0C0L4 1744 aa25.83■■□□□ 1.73
NDUFA3-213ENST00000484103 GYS1P13807 737 aa25.83■■□□□ 1.73
NDUFA3-213ENST00000484103 ADRA2BP18089 450 aa25.82■■□□□ 1.72
NDUFA3-213ENST00000484103 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
NDUFA3-213ENST00000484103 MRC1P22897 1456 aa25.81■■□□□ 1.72
NDUFA3-213ENST00000484103 CFAP53Q96M91 514 aa25.81■■□□□ 1.72
NDUFA3-213ENST00000484103 PARP3Q9Y6F1 533 aa25.8■■□□□ 1.72
NDUFA3-213ENST00000484103 INTS5Q6P9B9 1019 aaKnown RBP25.79■■□□□ 1.72
NDUFA3-213ENST00000484103 A0A0G2JLW4 131 aa25.78■■□□□ 1.72
NDUFA3-213ENST00000484103 PRKAR2BP31323 418 aa25.78■■□□□ 1.72
NDUFA3-213ENST00000484103 CCDC87Q9NVE4 849 aa25.78■■□□□ 1.72
NDUFA3-213ENST00000484103 KCPQ6ZWJ8 1503 aa25.78■■□□□ 1.72
NDUFA3-213ENST00000484103 PPP2R1AP30153 589 aa25.77■■□□□ 1.72
NDUFA3-213ENST00000484103 FKBP8Q14318 412 aa25.77■■□□□ 1.72
NDUFA3-213ENST00000484103 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
NDUFA3-213ENST00000484103 TEFQ10587 303 aa25.76■■□□□ 1.71
NDUFA3-213ENST00000484103 TTC5Q8N0Z6 440 aa25.76■■□□□ 1.71
NDUFA3-213ENST00000484103 GAS2L2Q8NHY3 880 aa25.76■■□□□ 1.71
NDUFA3-213ENST00000484103 ZNF526Q8TF50 670 aaPredicted RBP25.76■■□□□ 1.71
NDUFA3-213ENST00000484103 USP42Q9H9J4 1324 aaKnown RBP25.76■■□□□ 1.71
NDUFA3-213ENST00000484103 PXDNLA1KZ92 1463 aa25.75■■□□□ 1.71
NDUFA3-213ENST00000484103 GNAT3A8MTJ3 354 aa25.75■■□□□ 1.71
NDUFA3-213ENST00000484103 U2AF1L5P0DN76 240 aaPredicted RBP25.75■■□□□ 1.71
NDUFA3-213ENST00000484103 U2AF1Q01081 240 aaKnown RBP eCLIP25.75■■□□□ 1.71
NDUFA3-213ENST00000484103 PHACTR3Q96KR7 559 aa25.75■■□□□ 1.71
NDUFA3-213ENST00000484103 CYP19A1P11511 503 aaPredicted RBP25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 USPL1Q5W0Q7 1092 aa25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 IL17REQ8NFR9 667 aa25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 BCS1LQ9Y276 419 aa25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 ZBTB1Q9Y2K1 713 aa25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 ADAMTS7Q9UKP4 1686 aa25.74■■□□□ 1.71
NDUFA3-213ENST00000484103 C10orf71Q711Q0 1435 aa25.73■■□□□ 1.71
NDUFA3-213ENST00000484103 CANXP27824 592 aaKnown RBP25.73■■□□□ 1.71
NDUFA3-213ENST00000484103 RSPH6AQ9H0K4 717 aa25.73■■□□□ 1.71
NDUFA3-213ENST00000484103 ZPR1O75312 459 aa25.72■■□□□ 1.71
NDUFA3-213ENST00000484103 DPEP1P16444 411 aa25.72■■□□□ 1.71
NDUFA3-213ENST00000484103 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
NDUFA3-213ENST00000484103 ZNF330Q9Y3S2 320 aaPredicted RBP25.72■■□□□ 1.71
NDUFA3-213ENST00000484103 SOS1Q07889 1333 aaPredicted RBP25.71■■□□□ 1.71
NDUFA3-213ENST00000484103 GIGYF1O75420 1035 aaPredicted RBP25.71■■□□□ 1.71
NDUFA3-213ENST00000484103 DDR1Q08345 913 aa25.71■■□□□ 1.71
NDUFA3-213ENST00000484103 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
NDUFA3-213ENST00000484103 KIAA1551Q9HCM1 1747 aa25.7■■□□□ 1.7
NDUFA3-213ENST00000484103 COL15A1P39059 1388 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms